RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 ALDH8A1Q9H2A2 487 aaPredicted RBP7.82□□□□□ -1.16
CAPN3-210ENST00000561817 LTBP1Q14766 1721 aa7.81□□□□□ -1.16
CAPN3-210ENST00000561817 A0A0G2JLW4 131 aa7.81□□□□□ -1.16
CAPN3-210ENST00000561817 A6NJR5 290 aa7.81□□□□□ -1.16
CAPN3-210ENST00000561817 TRAK2O60296 914 aa7.81□□□□□ -1.16
CAPN3-210ENST00000561817 CYP21A2P08686 494 aa7.81□□□□□ -1.16
CAPN3-210ENST00000561817 HSPD1P10809 573 aaKnown RBP7.81□□□□□ -1.16
CAPN3-210ENST00000561817 CPA1P15085 419 aa7.81□□□□□ -1.16
CAPN3-210ENST00000561817 PDE6AP16499 860 aa7.81□□□□□ -1.16
CAPN3-210ENST00000561817 KLRK1P26718 216 aa7.81□□□□□ -1.16
CAPN3-210ENST00000561817 GRAPQ13588 217 aa7.81□□□□□ -1.16
CAPN3-210ENST00000561817 TTF1Q15361 905 aaPredicted RBP7.81□□□□□ -1.16
CAPN3-210ENST00000561817 STOX1Q6ZVD7 989 aa7.81□□□□□ -1.16
CAPN3-210ENST00000561817 RUFY3Q7L099 469 aa7.81□□□□□ -1.16
CAPN3-210ENST00000561817 GRAPLQ8TC17 118 aaPredicted RBP7.81□□□□□ -1.16
CAPN3-210ENST00000561817 PUS7LQ9H0K6 701 aaKnown RBP7.81□□□□□ -1.16
CAPN3-210ENST00000561817 WWC3Q9ULE0 1092 aa7.81□□□□□ -1.16
CAPN3-210ENST00000561817 PDS5AQ29RF7 1337 aaKnown RBP7.8□□□□□ -1.16
CAPN3-210ENST00000561817 LAMA4Q16363 1823 aa7.8□□□□□ -1.16
CAPN3-210ENST00000561817 CASTP20810 708 aaKnown RBP7.8□□□□□ -1.16
CAPN3-210ENST00000561817 POLD1P28340 1107 aa7.8□□□□□ -1.16
CAPN3-210ENST00000561817 GYG1P46976 350 aa7.8□□□□□ -1.16
CAPN3-210ENST00000561817 AK2P54819 239 aa7.8□□□□□ -1.16
CAPN3-210ENST00000561817 ST3GAL1Q11201 340 aa7.8□□□□□ -1.16
CAPN3-210ENST00000561817 RAB3GAP1Q15042 981 aa7.8□□□□□ -1.16
CAPN3-210ENST00000561817 LRRFIP1Q32MZ4 808 aaKnown RBP7.8□□□□□ -1.16
CAPN3-210ENST00000561817 C15orf52Q6ZUT6 534 aaKnown RBP7.8□□□□□ -1.16
CAPN3-210ENST00000561817 ZGPATQ8N5A5 531 aaKnown RBP7.8□□□□□ -1.16
CAPN3-210ENST00000561817 FLAD1Q8NFF5 587 aa7.8□□□□□ -1.16
CAPN3-210ENST00000561817 INTS4Q96HW7 963 aaKnown RBP7.8□□□□□ -1.16
CAPN3-210ENST00000561817 JAKMIP1Q96N16 626 aaKnown RBP7.8□□□□□ -1.16
CAPN3-210ENST00000561817 ANKRD2Q9GZV1 360 aa7.8□□□□□ -1.16
CAPN3-210ENST00000561817 MTFR1LQ9H019 292 aa7.8□□□□□ -1.16
CAPN3-210ENST00000561817 SPON1Q9HCB6 807 aa7.8□□□□□ -1.16
CAPN3-210ENST00000561817 ZNF532Q9HCE3 1301 aa7.79□□□□□ -1.16
CAPN3-210ENST00000561817 COL11A2P13942 1736 aaPredicted RBP7.79□□□□□ -1.16
CAPN3-210ENST00000561817 NPHP1O15259 732 aa7.79□□□□□ -1.16
CAPN3-210ENST00000561817 GPAA1O43292 621 aa7.79□□□□□ -1.16
CAPN3-210ENST00000561817 FRAT2O75474 233 aaPredicted RBP7.79□□□□□ -1.16
CAPN3-210ENST00000561817 LARGE1O95461 756 aa7.79□□□□□ -1.16
CAPN3-210ENST00000561817 ZKSCAN1P17029 563 aaPredicted RBP7.79□□□□□ -1.16
CAPN3-210ENST00000561817 RPS6KB1P23443 525 aa7.79□□□□□ -1.16
CAPN3-210ENST00000561817 SLC9C2Q5TAH2 1124 aa7.79□□□□□ -1.16
CAPN3-210ENST00000561817 RNF20Q5VTR2 975 aa7.79□□□□□ -1.16
CAPN3-210ENST00000561817 ZSCAN25Q6NSZ9 544 aa7.79□□□□□ -1.16
CAPN3-210ENST00000561817 CLEC17AQ6ZS10 378 aa7.79□□□□□ -1.16
CAPN3-210ENST00000561817 TXNRD3Q86VQ6 643 aa7.79□□□□□ -1.16
CAPN3-210ENST00000561817 NLGN1Q8N2Q7 840 aa7.79□□□□□ -1.16
CAPN3-210ENST00000561817 ZNF384Q8TF68 577 aa7.79□□□□□ -1.16
CAPN3-210ENST00000561817 ZNF516Q92618 1163 aa7.79□□□□□ -1.16
CAPN3-210ENST00000561817 CRAMP1Q96RY5 1269 aa7.79□□□□□ -1.16
CAPN3-210ENST00000561817 STRBPQ96SI9 672 aaKnown RBP7.79□□□□□ -1.16
CAPN3-210ENST00000561817 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.79□□□□□ -1.16
CAPN3-210ENST00000561817 KDM4CQ9H3R0 1056 aa7.79□□□□□ -1.16
CAPN3-210ENST00000561817 CWC22Q9HCG8 908 aaKnown RBP7.79□□□□□ -1.16
CAPN3-210ENST00000561817 ZDHHC9Q9Y397 364 aa7.79□□□□□ -1.16
CAPN3-210ENST00000561817 CYP46A1Q9Y6A2 500 aa7.79□□□□□ -1.16
CAPN3-210ENST00000561817 KIF13BQ9NQT8 1826 aa7.78□□□□□ -1.16
CAPN3-210ENST00000561817 SEMA3EO15041 775 aa7.78□□□□□ -1.16
CAPN3-210ENST00000561817 FGAP02671 866 aa7.78□□□□□ -1.16
CAPN3-210ENST00000561817 PSMA5P28066 241 aa7.78□□□□□ -1.16
CAPN3-210ENST00000561817 ST5P78524 1137 aa7.78□□□□□ -1.16
CAPN3-210ENST00000561817 EXOSC10Q01780 885 aaKnown RBP7.78□□□□□ -1.16
CAPN3-210ENST00000561817 PTGDRQ13258 359 aa7.78□□□□□ -1.16
CAPN3-210ENST00000561817 TOB2Q14106 344 aaPredicted RBP7.78□□□□□ -1.16
CAPN3-210ENST00000561817 KRT32Q14532 448 aa7.78□□□□□ -1.16
CAPN3-210ENST00000561817 LAPTM4AQ15012 233 aa7.78□□□□□ -1.16
CAPN3-210ENST00000561817 ALX1Q15699 326 aa7.78□□□□□ -1.16
CAPN3-210ENST00000561817 TTLL5Q6EMB2 1281 aa7.78□□□□□ -1.16
CAPN3-210ENST00000561817 PPP1R18Q6NYC8 613 aa7.78□□□□□ -1.16
CAPN3-210ENST00000561817 Q6ZNB5 142 aa7.78□□□□□ -1.16
CAPN3-210ENST00000561817 PRR14Q9BWN1 585 aa7.78□□□□□ -1.16
CAPN3-210ENST00000561817 BRIP1Q9BX63 1249 aa7.78□□□□□ -1.16
CAPN3-210ENST00000561817 AGXT2Q9BYV1 514 aa7.78□□□□□ -1.16
CAPN3-210ENST00000561817 PDRG1Q9NUG6 133 aa7.78□□□□□ -1.16
CAPN3-210ENST00000561817 LIMCH1Q9UPQ0 1083 aa7.78□□□□□ -1.16
CAPN3-210ENST00000561817 LEMD3Q9Y2U8 911 aa7.78□□□□□ -1.16
CAPN3-210ENST00000561817 DLEC1Q9Y238 1755 aa7.78□□□□□ -1.16
CAPN3-210ENST00000561817 ZMYM6O95789 1325 aa7.78□□□□□ -1.16
CAPN3-210ENST00000561817 DUOX1Q9NRD9 1551 aa7.77□□□□□ -1.17
CAPN3-210ENST00000561817 E7EWF7 191 aa7.77□□□□□ -1.17
CAPN3-210ENST00000561817 IDH1O75874 414 aaKnown RBP7.77□□□□□ -1.17
CAPN3-210ENST00000561817 BBOX1O75936 387 aa7.77□□□□□ -1.17
CAPN3-210ENST00000561817 MMP10P09238 476 aa7.77□□□□□ -1.17
CAPN3-210ENST00000561817 HIBADHP31937 336 aaKnown RBP7.77□□□□□ -1.17
CAPN3-210ENST00000561817 KCNJ4P48050 445 aa7.77□□□□□ -1.17
CAPN3-210ENST00000561817 GPSM2P81274 684 aa7.77□□□□□ -1.17
CAPN3-210ENST00000561817 PDE4CQ08493 712 aa7.77□□□□□ -1.17
CAPN3-210ENST00000561817 MAP3K12Q12852 859 aa7.77□□□□□ -1.17
CAPN3-210ENST00000561817 PKP1Q13835 747 aa7.77□□□□□ -1.17
CAPN3-210ENST00000561817 WASHC4Q2M389 1173 aa7.77□□□□□ -1.17
CAPN3-210ENST00000561817 BLOC1S2Q6QNY1 142 aa7.77□□□□□ -1.17
CAPN3-210ENST00000561817 ADGRA1Q86SQ6 560 aa7.77□□□□□ -1.17
CAPN3-210ENST00000561817 FBXL16Q8N461 479 aa7.77□□□□□ -1.17
CAPN3-210ENST00000561817 MAGEB6Q8N7X4 407 aa7.77□□□□□ -1.17
CAPN3-210ENST00000561817 RBM46Q8TBY0 533 aaKnown RBP7.77□□□□□ -1.17
CAPN3-210ENST00000561817 TNPO1Q92973 898 aaKnown RBP7.77□□□□□ -1.17
CAPN3-210ENST00000561817 RBM17Q96I25 401 aaKnown RBP7.77□□□□□ -1.17
CAPN3-210ENST00000561817 NEK1Q96PY6 1258 aa7.77□□□□□ -1.17
CAPN3-210ENST00000561817 PRKD2Q9BZL6 878 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms