RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 VIPAS39Q9H9C1 493 aa21.26■□□□□ 0.99
RAB40C-206ENST00000561781 PCDH11XQ9BZA7 1347 aa21.25■□□□□ 0.99
RAB40C-206ENST00000561781 PCDH11YQ9BZA8 1340 aa21.25■□□□□ 0.99
RAB40C-206ENST00000561781 ANKRD33BA6NCL7 494 aa21.25■□□□□ 0.99
RAB40C-206ENST00000561781 SLC27A2O14975 620 aa21.25■□□□□ 0.99
RAB40C-206ENST00000561781 GLRX3O76003 335 aaKnown RBP21.25■□□□□ 0.99
RAB40C-206ENST00000561781 CCT5P48643 541 aa21.25■□□□□ 0.99
RAB40C-206ENST00000561781 MRPL12P52815 198 aaKnown RBP21.25■□□□□ 0.99
RAB40C-206ENST00000561781 FAM160A1Q05DH4 1040 aa21.25■□□□□ 0.99
RAB40C-206ENST00000561781 ZKSCAN4Q969J2 545 aaPredicted RBP21.25■□□□□ 0.99
RAB40C-206ENST00000561781 CLIC6Q96NY7 704 aa21.25■□□□□ 0.99
RAB40C-206ENST00000561781 ATXN2Q99700 1313 aaKnown RBP21.25■□□□□ 0.99
RAB40C-206ENST00000561781 KAT6BQ8WYB5 2073 aa21.25■□□□□ 0.99
RAB40C-206ENST00000561781 CUTAO60888 179 aa21.25■□□□□ 0.99
RAB40C-206ENST00000561781 PAX7P23759 505 aa21.25■□□□□ 0.99
RAB40C-206ENST00000561781 ADD1P35611 737 aaKnown RBP21.25■□□□□ 0.99
RAB40C-206ENST00000561781 AARSP49588 968 aaKnown RBP eCLIP21.25■□□□□ 0.99
RAB40C-206ENST00000561781 DPCR1Q3MIW9 517 aa21.25■□□□□ 0.99
RAB40C-206ENST00000561781 MAP3K5Q99683 1374 aa21.24■□□□□ 0.99
RAB40C-206ENST00000561781 KCNQ2O43526 872 aa21.24■□□□□ 0.99
RAB40C-206ENST00000561781 RPS6KB1P23443 525 aa21.24■□□□□ 0.99
RAB40C-206ENST00000561781 AMOTL1Q8IY63 956 aa21.24■□□□□ 0.99
RAB40C-206ENST00000561781 PNKPQ96T60 521 aa21.24■□□□□ 0.99
RAB40C-206ENST00000561781 CDCA7Q9BWT1 371 aaPredicted RBP21.24■□□□□ 0.99
RAB40C-206ENST00000561781 RCOR1Q9UKL0 485 aa21.24■□□□□ 0.99
RAB40C-206ENST00000561781 ODF2LQ9ULJ1 636 aa21.24■□□□□ 0.99
RAB40C-206ENST00000561781 WDHD1O75717 1129 aaPredicted RBP21.24■□□□□ 0.99
RAB40C-206ENST00000561781 INHBEP58166 350 aa21.24■□□□□ 0.99
RAB40C-206ENST00000561781 POLA2Q14181 598 aa21.24■□□□□ 0.99
RAB40C-206ENST00000561781 ISM2Q6H9L7 571 aa21.24■□□□□ 0.99
RAB40C-206ENST00000561781 TUBB2AQ13885 445 aa21.23■□□□□ 0.99
RAB40C-206ENST00000561781 C1orf141Q5JVX7 400 aa21.23■□□□□ 0.99
RAB40C-206ENST00000561781 NBPF5PQ86XG9 351 aaPredicted RBP21.23■□□□□ 0.99
RAB40C-206ENST00000561781 MAP4K1Q92918 833 aa21.23■□□□□ 0.99
RAB40C-206ENST00000561781 ITFG2Q969R8 447 aa21.23■□□□□ 0.99
RAB40C-206ENST00000561781 FMNL2Q96PY5 1086 aa21.23■□□□□ 0.99
RAB40C-206ENST00000561781 TUBB2BQ9BVA1 445 aa21.23■□□□□ 0.99
RAB40C-206ENST00000561781 SLC24A3Q9HC58 644 aa21.23■□□□□ 0.99
RAB40C-206ENST00000561781 TAF6LQ9Y6J9 622 aa21.23■□□□□ 0.99
RAB40C-206ENST00000561781 KDM6AO15550 1401 aaPredicted RBP21.23■□□□□ 0.99
RAB40C-206ENST00000561781 AMOTQ4VCS5 1084 aa21.23■□□□□ 0.99
RAB40C-206ENST00000561781 TTC19Q6DKK2 380 aaPredicted RBP21.23■□□□□ 0.99
RAB40C-206ENST00000561781 SMARCC1Q92922 1105 aaPredicted RBP21.23■□□□□ 0.99
RAB40C-206ENST00000561781 SUGCTQ9HAC7 445 aa21.23■□□□□ 0.99
RAB40C-206ENST00000561781 CAPN7Q9Y6W3 813 aa21.23■□□□□ 0.99
RAB40C-206ENST00000561781 SRCAPQ6ZRS2 3230 aa21.23■□□□□ 0.99
RAB40C-206ENST00000561781 SKIDA1Q1XH10 827 aa21.22■□□□□ 0.99
RAB40C-206ENST00000561781 WWC2Q6AWC2 1192 aa21.22■□□□□ 0.99
RAB40C-206ENST00000561781 IFNL2Q8IZJ0 200 aa21.22■□□□□ 0.99
RAB40C-206ENST00000561781 FSIP1Q8NA03 581 aa21.22■□□□□ 0.99
RAB40C-206ENST00000561781 NECTIN2Q92692 538 aa21.22■□□□□ 0.99
RAB40C-206ENST00000561781 USP42Q9H9J4 1324 aaKnown RBP21.22■□□□□ 0.99
RAB40C-206ENST00000561781 SHTN1A0MZ66 631 aa21.21■□□□□ 0.99
RAB40C-206ENST00000561781 CBFA2T2O43439 604 aa21.21■□□□□ 0.99
RAB40C-206ENST00000561781 PRPF6O94906 941 aaKnown RBP21.21■□□□□ 0.99
RAB40C-206ENST00000561781 WLSQ5T9L3 541 aa21.21■□□□□ 0.99
RAB40C-206ENST00000561781 CCDC12Q8WUD4 166 aaPredicted RBP21.21■□□□□ 0.99
RAB40C-206ENST00000561781 IL17REQ8NFR9 667 aa21.2■□□□□ 0.99
RAB40C-206ENST00000561781 XAGE2Q96GT9 111 aa21.2■□□□□ 0.99
RAB40C-206ENST00000561781 FAM227BQ96M60 508 aa21.2■□□□□ 0.99
RAB40C-206ENST00000561781 SDF4Q9BRK5 362 aa21.2■□□□□ 0.99
RAB40C-206ENST00000561781 ALDH8A1Q9H2A2 487 aaPredicted RBP21.2■□□□□ 0.99
RAB40C-206ENST00000561781 ZSWIM4Q9H7M6 989 aa21.2■□□□□ 0.99
RAB40C-206ENST00000561781 A0A1B0GUA9 196 aa21.2■□□□□ 0.98
RAB40C-206ENST00000561781 FSBPO95073 299 aa21.2■□□□□ 0.98
RAB40C-206ENST00000561781 FANCCQ00597 558 aa21.2■□□□□ 0.98
RAB40C-206ENST00000561781 NBPF3Q9H094 633 aa21.2■□□□□ 0.98
RAB40C-206ENST00000561781 MPHOSPH10O00566 681 aaKnown RBP21.19■□□□□ 0.98
RAB40C-206ENST00000561781 AKAP4Q5JQC9 854 aa21.19■□□□□ 0.98
RAB40C-206ENST00000561781 AP1ARQ63HQ0 302 aa21.19■□□□□ 0.98
RAB40C-206ENST00000561781 IQCA1Q86XH1 822 aa21.19■□□□□ 0.98
RAB40C-206ENST00000561781 USP28Q96RU2 1077 aa21.19■□□□□ 0.98
RAB40C-206ENST00000561781 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.19■□□□□ 0.98
RAB40C-206ENST00000561781 CDHR2Q9BYE9 1310 aa21.19■□□□□ 0.98
RAB40C-206ENST00000561781 LRRIQ3A6PVS8 624 aaPredicted RBP21.19■□□□□ 0.98
RAB40C-206ENST00000561781 GNAT3A8MTJ3 354 aa21.19■□□□□ 0.98
RAB40C-206ENST00000561781 SYF2O95926 243 aaKnown RBP21.19■□□□□ 0.98
RAB40C-206ENST00000561781 FNTAP49354 379 aa21.19■□□□□ 0.98
RAB40C-206ENST00000561781 ADCY2Q08462 1091 aa21.19■□□□□ 0.98
RAB40C-206ENST00000561781 CDC23Q9UJX2 597 aa21.19■□□□□ 0.98
RAB40C-206ENST00000561781 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.19■□□□□ 0.98
RAB40C-206ENST00000561781 TOGARAM1Q9Y4F4 1720 aa21.19■□□□□ 0.98
RAB40C-206ENST00000561781 TTC36A6NLP5 189 aa21.18■□□□□ 0.98
RAB40C-206ENST00000561781 ME1P48163 572 aa21.18■□□□□ 0.98
RAB40C-206ENST00000561781 GOLGA8FQ08AF8 430 aa21.18■□□□□ 0.98
RAB40C-206ENST00000561781 GOLGA8DPQ0D2H9 430 aa21.18■□□□□ 0.98
RAB40C-206ENST00000561781 TBC1D8BQ0IIM8 1120 aa21.18■□□□□ 0.98
RAB40C-206ENST00000561781 GRIK3Q13003 919 aa21.18■□□□□ 0.98
RAB40C-206ENST00000561781 NCAPHQ15003 741 aa21.18■□□□□ 0.98
RAB40C-206ENST00000561781 KIF4BQ2VIQ3 1234 aa21.18■□□□□ 0.98
RAB40C-206ENST00000561781 MYH15Q9Y2K3 1946 aa21.18■□□□□ 0.98
RAB40C-206ENST00000561781 LMOD1P29536 600 aaPredicted RBP21.18■□□□□ 0.98
RAB40C-206ENST00000561781 VSNL1P62760 191 aa21.18■□□□□ 0.98
RAB40C-206ENST00000561781 SPATS2Q86XZ4 545 aaKnown RBP21.18■□□□□ 0.98
RAB40C-206ENST00000561781 FMR1NBQ8N0W7 255 aaPredicted RBP21.18■□□□□ 0.98
RAB40C-206ENST00000561781 FAM210AQ96ND0 272 aa21.18■□□□□ 0.98
RAB40C-206ENST00000561781 SH3GL3Q99963 347 aa21.18■□□□□ 0.98
RAB40C-206ENST00000561781 CD248Q9HCU0 757 aa21.18■□□□□ 0.98
RAB40C-206ENST00000561781 KIAA1468Q9P260 1216 aa21.18■□□□□ 0.98
RAB40C-206ENST00000561781 FOSBP53539 338 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms