RNA–Protein interactions for RNA: ENST00000561743.5

USB1-205, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 3 BASIC

Gene USB1, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-205ENST00000561743 ATAD5Q96QE3 1844 aa16.61■□□□□ 0.25
USB1-205ENST00000561743 RHBDL3P58872 404 aa16.61■□□□□ 0.25
USB1-205ENST00000561743 FBXO46Q6PJ61 603 aaPredicted RBP16.61■□□□□ 0.25
USB1-205ENST00000561743 SH3BP5LQ7L8J4 393 aa16.61■□□□□ 0.25
USB1-205ENST00000561743 CETPP11597 493 aa16.6■□□□□ 0.25
USB1-205ENST00000561743 PPATQ06203 517 aa16.6■□□□□ 0.25
USB1-205ENST00000561743 SNAPC2Q13487 334 aa16.6■□□□□ 0.25
USB1-205ENST00000561743 TTC39AQ5SRH9 613 aa16.6■□□□□ 0.25
USB1-205ENST00000561743 NOL9Q5SY16 702 aaKnown RBP16.6■□□□□ 0.25
USB1-205ENST00000561743 RAI14Q9P0K7 980 aa16.6■□□□□ 0.25
USB1-205ENST00000561743 SIPA1L1O43166 1804 aa16.6■□□□□ 0.25
USB1-205ENST00000561743 DDTLA6NHG4 134 aaPredicted RBP16.59■□□□□ 0.25
USB1-205ENST00000561743 SOX10P56693 466 aa16.59■□□□□ 0.25
USB1-205ENST00000561743 GSTO1P78417 241 aa16.59■□□□□ 0.25
USB1-205ENST00000561743 MLLT1Q03111 559 aaPredicted RBP16.59■□□□□ 0.25
USB1-205ENST00000561743 PICALMQ13492 652 aa16.59■□□□□ 0.25
USB1-205ENST00000561743 TAF1CQ15572 869 aaPredicted RBP16.59■□□□□ 0.25
USB1-205ENST00000561743 CCDC158Q5M9N0 1113 aa16.59■□□□□ 0.25
USB1-205ENST00000561743 OTOP1Q7RTM1 612 aa16.59■□□□□ 0.25
USB1-205ENST00000561743 SNRKQ9NRH2 765 aa16.59■□□□□ 0.25
USB1-205ENST00000561743 TLR7Q9NYK1 1049 aaKnown RBP16.59■□□□□ 0.25
USB1-205ENST00000561743 LRP2BPQ9P2M1 347 aa16.59■□□□□ 0.25
USB1-205ENST00000561743 DBNLQ9UJU6 430 aaKnown RBP16.59■□□□□ 0.25
USB1-205ENST00000561743 TRIM17Q9Y577 477 aa16.59■□□□□ 0.25
USB1-205ENST00000561743 PHF20L1A8MW92 1017 aa16.58■□□□□ 0.24
USB1-205ENST00000561743 BTBD19C9JJ37 291 aa16.58■□□□□ 0.24
USB1-205ENST00000561743 LDHCP07864 332 aa16.58■□□□□ 0.24
USB1-205ENST00000561743 CAP1Q01518 475 aa16.58■□□□□ 0.24
USB1-205ENST00000561743 SP3Q02447 781 aa16.58■□□□□ 0.24
USB1-205ENST00000561743 MAP3K10Q02779 954 aa16.58■□□□□ 0.24
USB1-205ENST00000561743 ZSCAN29Q8IWY8 852 aaPredicted RBP16.58■□□□□ 0.24
USB1-205ENST00000561743 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.58■□□□□ 0.24
USB1-205ENST00000561743 CD99L2Q8TCZ2 262 aa16.58■□□□□ 0.24
USB1-205ENST00000561743 EAF2Q96CJ1 260 aaPredicted RBP16.58■□□□□ 0.24
USB1-205ENST00000561743 ERO1AQ96HE7 468 aa16.58■□□□□ 0.24
USB1-205ENST00000561743 ZNF512BQ96KM6 892 aaPredicted RBP16.58■□□□□ 0.24
USB1-205ENST00000561743 ZFYVE28Q9HCC9 887 aa16.58■□□□□ 0.24
USB1-205ENST00000561743 ZCCHC17Q9NP64 241 aaKnown RBP16.58■□□□□ 0.24
USB1-205ENST00000561743 KCNH4Q9UQ05 1017 aa16.58■□□□□ 0.24
USB1-205ENST00000561743 COL2A1P02458 1487 aaPredicted RBP16.58■□□□□ 0.24
USB1-205ENST00000561743 NPM3O75607 178 aaKnown RBP16.57■□□□□ 0.24
USB1-205ENST00000561743 CYP2E1P05181 493 aaPredicted RBP16.57■□□□□ 0.24
USB1-205ENST00000561743 SLURP2P0DP57 97 aa16.57■□□□□ 0.24
USB1-205ENST00000561743 MS4A1P11836 297 aa16.57■□□□□ 0.24
USB1-205ENST00000561743 CCDC8Q9H0W5 538 aaPredicted RBP16.57■□□□□ 0.24
USB1-205ENST00000561743 EXOC6BQ9Y2D4 811 aa16.57■□□□□ 0.24
USB1-205ENST00000561743 RBBP6Q7Z6E9 1792 aaKnown RBP16.56■□□□□ 0.24
USB1-205ENST00000561743 MAP4K4O95819 1239 aaPredicted RBP16.56■□□□□ 0.24
USB1-205ENST00000561743 SCYL3Q8IZE3 742 aa16.56■□□□□ 0.24
USB1-205ENST00000561743 RCAN3Q9UKA8 241 aa16.56■□□□□ 0.24
USB1-205ENST00000561743 CENPFP49454 3210 aa16.56■□□□□ 0.24
USB1-205ENST00000561743 ZAP70P43403 619 aa16.55■□□□□ 0.24
USB1-205ENST00000561743 NAA16Q6N069 864 aaPredicted RBP16.55■□□□□ 0.24
USB1-205ENST00000561743 ADGRA1Q86SQ6 560 aa16.55■□□□□ 0.24
USB1-205ENST00000561743 DDX19BQ9UMR2 479 aa16.55■□□□□ 0.24
USB1-205ENST00000561743 COG6Q9Y2V7 657 aa16.55■□□□□ 0.24
USB1-205ENST00000561743 TLR2O60603 784 aa16.54■□□□□ 0.24
USB1-205ENST00000561743 PTPRAP18433 802 aa16.54■□□□□ 0.24
USB1-205ENST00000561743 MOGSQ13724 837 aa16.54■□□□□ 0.24
USB1-205ENST00000561743 ERC1Q8IUD2 1116 aa16.54■□□□□ 0.24
USB1-205ENST00000561743 SH3RF3Q8TEJ3 882 aaPredicted RBP16.54■□□□□ 0.24
USB1-205ENST00000561743 OSBPL5Q9H0X9 879 aaPredicted RBP16.54■□□□□ 0.24
USB1-205ENST00000561743 EFCC1Q9HA90 598 aa16.54■□□□□ 0.24
USB1-205ENST00000561743 PIH1D3Q9NQM4 214 aaKnown RBP16.54■□□□□ 0.24
USB1-205ENST00000561743 ZBTB40Q9NUA8 1239 aa16.54■□□□□ 0.24
USB1-205ENST00000561743 PTPN22Q9Y2R2 807 aa16.54■□□□□ 0.24
USB1-205ENST00000561743 MYH1P12882 1939 aa16.54■□□□□ 0.24
USB1-205ENST00000561743 MGAMO43451 1857 aa16.54■□□□□ 0.24
USB1-205ENST00000561743 TBC1D12O60347 775 aa16.53■□□□□ 0.24
USB1-205ENST00000561743 CTNND1O60716 968 aaKnown RBP16.53■□□□□ 0.24
USB1-205ENST00000561743 ANKRD23Q86SG2 305 aa16.53■□□□□ 0.24
USB1-205ENST00000561743 TEX11Q8IYF3 940 aa16.53■□□□□ 0.24
USB1-205ENST00000561743 NOL10Q9BSC4 688 aaKnown RBP16.53■□□□□ 0.24
USB1-205ENST00000561743 PICK1Q9NRD5 415 aa16.53■□□□□ 0.24
USB1-205ENST00000561743 AATFQ9NY61 560 aaKnown RBP eCLIP16.53■□□□□ 0.24
USB1-205ENST00000561743 LOC285556D6RIA3 1793 aa16.53■□□□□ 0.24
USB1-205ENST00000561743 ADGRA2Q96PE1 1338 aa16.52■□□□□ 0.24
USB1-205ENST00000561743 FAM196BA6NMK8 535 aa16.52■□□□□ 0.24
USB1-205ENST00000561743 PDHXO00330 501 aa16.52■□□□□ 0.24
USB1-205ENST00000561743 CXCL11O14625 94 aa16.52■□□□□ 0.24
USB1-205ENST00000561743 IGSF3O75054 1194 aa16.52■□□□□ 0.24
USB1-205ENST00000561743 HSP90AB4PQ58FF6 505 aa16.52■□□□□ 0.24
USB1-205ENST00000561743 AACSQ86V21 672 aa16.52■□□□□ 0.24
USB1-205ENST00000561743 SIRT2Q8IXJ6 389 aa16.52■□□□□ 0.24
USB1-205ENST00000561743 RPAP2Q8IXW5 612 aaPredicted RBP16.52■□□□□ 0.24
USB1-205ENST00000561743 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.52■□□□□ 0.24
USB1-205ENST00000561743 NDUFB9Q9Y6M9 179 aa16.52■□□□□ 0.24
USB1-205ENST00000561743 ZHX2Q9Y6X8 837 aa16.52■□□□□ 0.24
USB1-205ENST00000561743 BAG3O95817 575 aa16.51■□□□□ 0.23
USB1-205ENST00000561743 PLCG2P16885 1265 aa16.51■□□□□ 0.23
USB1-205ENST00000561743 PPP4CP60510 307 aa16.51■□□□□ 0.23
USB1-205ENST00000561743 GPAT2Q6NUI2 795 aa16.51■□□□□ 0.23
USB1-205ENST00000561743 RHPN1Q8TCX5 695 aa16.51■□□□□ 0.23
USB1-205ENST00000561743 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.51■□□□□ 0.23
USB1-205ENST00000561743 IL1RAPL2Q9NP60 686 aa16.51■□□□□ 0.23
USB1-205ENST00000561743 AFG3L2Q9Y4W6 797 aa16.51■□□□□ 0.23
USB1-205ENST00000561743 A0A0G2JLL6 359 aaPredicted RBP16.5■□□□□ 0.23
USB1-205ENST00000561743 LACTBP83111 547 aaPredicted RBP16.5■□□□□ 0.23
USB1-205ENST00000561743 C20orf194Q5TEA3 1177 aa16.5■□□□□ 0.23
USB1-205ENST00000561743 C17orf99Q6UX52 265 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms