RNA–Protein interactions for RNA: ENST00000561726.1

TNRC6A-208, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 4

Gene TNRC6A, Length 543 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-208ENST00000561726 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.89□□□□□ -1.63
TNRC6A-208ENST00000561726 NXPE4Q6UWF7 544 aa4.89□□□□□ -1.63
TNRC6A-208ENST00000561726 PDZD3Q86UT5 571 aa4.89□□□□□ -1.63
TNRC6A-208ENST00000561726 KRTAP1-3Q8IUG1 177 aa4.89□□□□□ -1.63
TNRC6A-208ENST00000561726 STK35Q8TDR2 534 aa4.89□□□□□ -1.63
TNRC6A-208ENST00000561726 FANCD2OSQ96PS1 177 aa4.89□□□□□ -1.63
TNRC6A-208ENST00000561726 TMEM39AQ9NV64 488 aa4.89□□□□□ -1.63
TNRC6A-208ENST00000561726 PPP4R2Q9NY27 417 aa4.89□□□□□ -1.63
TNRC6A-208ENST00000561726 ZC3H7BQ9UGR2 993 aaKnown RBP4.89□□□□□ -1.63
TNRC6A-208ENST00000561726 AKAP2Q9Y2D5 859 aa4.89□□□□□ -1.63
TNRC6A-208ENST00000561726 SLFN14P0C7P3 912 aa4.88□□□□□ -1.63
TNRC6A-208ENST00000561726 CYP27A1Q02318 531 aa4.88□□□□□ -1.63
TNRC6A-208ENST00000561726 ID3Q02535 119 aa4.88□□□□□ -1.63
TNRC6A-208ENST00000561726 PPP2R3AQ06190 1150 aa4.88□□□□□ -1.63
TNRC6A-208ENST00000561726 CDK5R2Q13319 367 aa4.88□□□□□ -1.63
TNRC6A-208ENST00000561726 ENOX2Q16206 610 aaKnown RBP4.88□□□□□ -1.63
TNRC6A-208ENST00000561726 KIF4BQ2VIQ3 1234 aa4.88□□□□□ -1.63
TNRC6A-208ENST00000561726 OGFOD3Q6PK18 319 aa4.88□□□□□ -1.63
TNRC6A-208ENST00000561726 VSIG10LQ86VR7 867 aa4.88□□□□□ -1.63
TNRC6A-208ENST00000561726 KCNB2Q92953 911 aa4.88□□□□□ -1.63
TNRC6A-208ENST00000561726 PIDD1Q9HB75 910 aa4.88□□□□□ -1.63
TNRC6A-208ENST00000561726 DISC1Q9NRI5 854 aa4.88□□□□□ -1.63
TNRC6A-208ENST00000561726 BSDC1Q9NW68 430 aaPredicted RBP4.88□□□□□ -1.63
TNRC6A-208ENST00000561726 PCDHGC5Q9Y5F6 944 aa4.88□□□□□ -1.63
TNRC6A-208ENST00000561726 CADPSQ9ULU8 1353 aa4.88□□□□□ -1.63
TNRC6A-208ENST00000561726 ANKRD62A6NC57 917 aa4.87□□□□□ -1.63
TNRC6A-208ENST00000561726 TREHO43280 583 aa4.87□□□□□ -1.63
TNRC6A-208ENST00000561726 CLSTN1O94985 981 aa4.87□□□□□ -1.63
TNRC6A-208ENST00000561726 XRCC5P13010 732 aaKnown RBP4.87□□□□□ -1.63
TNRC6A-208ENST00000561726 TCF3P15923 654 aa4.87□□□□□ -1.63
TNRC6A-208ENST00000561726 TTLL4Q14679 1199 aa4.87□□□□□ -1.63
TNRC6A-208ENST00000561726 COL19A1Q14993 1142 aa4.87□□□□□ -1.63
TNRC6A-208ENST00000561726 LCE3BQ5TA77 95 aa4.87□□□□□ -1.63
TNRC6A-208ENST00000561726 KRTAP19-1Q8IUB9 90 aa4.87□□□□□ -1.63
TNRC6A-208ENST00000561726 SULF2Q8IWU5 870 aa4.87□□□□□ -1.63
TNRC6A-208ENST00000561726 TP53INP2Q8IXH6 220 aa4.87□□□□□ -1.63
TNRC6A-208ENST00000561726 C8orf37Q96NL8 207 aa4.87□□□□□ -1.63
TNRC6A-208ENST00000561726 FMNL2Q96PY5 1086 aa4.87□□□□□ -1.63
TNRC6A-208ENST00000561726 SETDB2Q96T68 719 aa4.87□□□□□ -1.63
TNRC6A-208ENST00000561726 ATXN3LQ9H3M9 355 aa4.87□□□□□ -1.63
TNRC6A-208ENST00000561726 KRT82Q9NSB4 513 aa4.87□□□□□ -1.63
TNRC6A-208ENST00000561726 RNGTTO60942 597 aaKnown RBP4.86□□□□□ -1.63
TNRC6A-208ENST00000561726 FAM87AP0C7U9 286 aa4.86□□□□□ -1.63
TNRC6A-208ENST00000561726 HCLS1P14317 486 aaPredicted RBP4.86□□□□□ -1.63
TNRC6A-208ENST00000561726 ARNTP27540 789 aa4.86□□□□□ -1.63
TNRC6A-208ENST00000561726 MAP1SQ66K74 1059 aaPredicted RBP4.86□□□□□ -1.63
TNRC6A-208ENST00000561726 MPRIPQ6WCQ1 1025 aa4.86□□□□□ -1.63
TNRC6A-208ENST00000561726 NOL8Q76FK4 1167 aaKnown RBP4.86□□□□□ -1.63
TNRC6A-208ENST00000561726 SMYD4Q8IYR2 804 aaPredicted RBP4.86□□□□□ -1.63
TNRC6A-208ENST00000561726 C3orf58Q8NDZ4 430 aa4.86□□□□□ -1.63
TNRC6A-208ENST00000561726 FLCNQ8NFG4 579 aa4.86□□□□□ -1.63
TNRC6A-208ENST00000561726 FBXL18Q96ME1 805 aa4.86□□□□□ -1.63
TNRC6A-208ENST00000561726 GOLGA2P5Q9HBQ8 144 aa4.86□□□□□ -1.63
TNRC6A-208ENST00000561726 RNF114Q9Y508 228 aa4.86□□□□□ -1.63
TNRC6A-208ENST00000561726 NEFMP07197 916 aa4.85□□□□□ -1.63
TNRC6A-208ENST00000561726 NME2P22392 152 aa4.85□□□□□ -1.63
TNRC6A-208ENST00000561726 TXKP42681 527 aa4.85□□□□□ -1.63
TNRC6A-208ENST00000561726 MAPK8P45983 427 aa4.85□□□□□ -1.63
TNRC6A-208ENST00000561726 CYP27C1Q4G0S4 372 aa4.85□□□□□ -1.63
TNRC6A-208ENST00000561726 PAK6Q9NQU5 681 aaPredicted RBP4.85□□□□□ -1.63
TNRC6A-208ENST00000561726 WWC3Q9ULE0 1092 aa4.85□□□□□ -1.63
TNRC6A-208ENST00000561726 FBXO24O75426 580 aa4.84□□□□□ -1.63
TNRC6A-208ENST00000561726 LEFTY1O75610 366 aa4.84□□□□□ -1.63
TNRC6A-208ENST00000561726 ZNF252P-AS1Q0IIN9 211 aa4.84□□□□□ -1.63
TNRC6A-208ENST00000561726 ZC3H12AQ5D1E8 599 aaKnown RBP4.84□□□□□ -1.63
TNRC6A-208ENST00000561726 TPTE2Q6XPS3 522 aa4.84□□□□□ -1.63
TNRC6A-208ENST00000561726 ZNF574Q6ZN55 896 aaPredicted RBP4.84□□□□□ -1.63
TNRC6A-208ENST00000561726 CBLL1Q75N03 491 aa4.84□□□□□ -1.63
TNRC6A-208ENST00000561726 FAM181AQ8N9Y4 354 aa4.84□□□□□ -1.63
TNRC6A-208ENST00000561726 GRIN3AQ8TCU5 1115 aa4.84□□□□□ -1.63
TNRC6A-208ENST00000561726 GPBAR1Q8TDU6 330 aa4.84□□□□□ -1.63
TNRC6A-208ENST00000561726 ZNF526Q8TF50 670 aaPredicted RBP4.84□□□□□ -1.63
TNRC6A-208ENST00000561726 BCL7CQ8WUZ0 217 aaPredicted RBP4.84□□□□□ -1.63
TNRC6A-208ENST00000561726 UBXN4Q92575 508 aa4.84□□□□□ -1.63
TNRC6A-208ENST00000561726 NECAB3Q96P71 396 aaPredicted RBP4.84□□□□□ -1.63
TNRC6A-208ENST00000561726 HIRIP3Q9BW71 556 aaPredicted RBP4.84□□□□□ -1.63
TNRC6A-208ENST00000561726 OSBPL7Q9BZF2 842 aa4.84□□□□□ -1.63
TNRC6A-208ENST00000561726 CBX8Q9HC52 389 aa4.84□□□□□ -1.63
TNRC6A-208ENST00000561726 U3KQE9 123 aa4.84□□□□□ -1.63
TNRC6A-208ENST00000561726 ENC1O14682 589 aa4.83□□□□□ -1.64
TNRC6A-208ENST00000561726 PAGE1O75459 146 aa4.83□□□□□ -1.64
TNRC6A-208ENST00000561726 ZNF16P17020 682 aaPredicted RBP4.83□□□□□ -1.64
TNRC6A-208ENST00000561726 ERCC3P19447 782 aa4.83□□□□□ -1.64
TNRC6A-208ENST00000561726 BMP6P22004 513 aa4.83□□□□□ -1.64
TNRC6A-208ENST00000561726 GSTT1P30711 240 aa4.83□□□□□ -1.64
TNRC6A-208ENST00000561726 HNRNPUQ00839 825 aaKnown RBP eCLIP4.83□□□□□ -1.64
TNRC6A-208ENST00000561726 FMR1Q06787 632 aaKnown RBP eCLIP4.83□□□□□ -1.64
TNRC6A-208ENST00000561726 BNIP3Q12983 259 aa4.83□□□□□ -1.64
TNRC6A-208ENST00000561726 SPRED2Q7Z698 418 aa4.83□□□□□ -1.64
TNRC6A-208ENST00000561726 WFDC3Q8IUB2 231 aa4.83□□□□□ -1.64
TNRC6A-208ENST00000561726 ZSCAN29Q8IWY8 852 aaPredicted RBP4.83□□□□□ -1.64
TNRC6A-208ENST00000561726 PLD6Q8N2A8 252 aaKnown RBP4.83□□□□□ -1.64
TNRC6A-208ENST00000561726 ISL2Q96A47 359 aa4.83□□□□□ -1.64
TNRC6A-208ENST00000561726 ACSBG1Q96GR2 724 aa4.83□□□□□ -1.64
TNRC6A-208ENST00000561726 EMILIN2Q9BXX0 1053 aa4.83□□□□□ -1.64
TNRC6A-208ENST00000561726 SSU72Q9NP77 194 aaKnown RBP4.83□□□□□ -1.64
TNRC6A-208ENST00000561726 PPP1R1BQ9UD71 204 aaPredicted RBP4.83□□□□□ -1.64
TNRC6A-208ENST00000561726 PCOLCE2Q9UKZ9 415 aa4.83□□□□□ -1.64
TNRC6A-208ENST00000561726 SLC5A6Q9Y289 635 aa4.83□□□□□ -1.64
TNRC6A-208ENST00000561726 CSADQ9Y600 493 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms