RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 SH3BP5LQ7L8J4 393 aa18.91■□□□□ 0.62
CCDC113-203ENST00000561517 CFHR5Q9BXR6 569 aa18.91■□□□□ 0.62
CCDC113-203ENST00000561517 SNCAIPQ9Y6H5 919 aa18.91■□□□□ 0.62
CCDC113-203ENST00000561517 TESPA1A2RU30 521 aaPredicted RBP18.9■□□□□ 0.62
CCDC113-203ENST00000561517 IFNL1Q8IU54 200 aa18.9■□□□□ 0.62
CCDC113-203ENST00000561517 CNKSR2Q8WXI2 1034 aa18.9■□□□□ 0.62
CCDC113-203ENST00000561517 ZKSCAN4Q969J2 545 aaPredicted RBP18.9■□□□□ 0.62
CCDC113-203ENST00000561517 DDTLA6NHG4 134 aaPredicted RBP18.89■□□□□ 0.61
CCDC113-203ENST00000561517 SPDYE5A6NIY4 337 aa18.89■□□□□ 0.61
CCDC113-203ENST00000561517 ALDH1A1P00352 501 aa18.89■□□□□ 0.61
CCDC113-203ENST00000561517 IFIT2P09913 472 aaKnown RBP18.89■□□□□ 0.61
CCDC113-203ENST00000561517 PPP4CP60510 307 aa18.89■□□□□ 0.61
CCDC113-203ENST00000561517 MAP3K10Q02779 954 aa18.89■□□□□ 0.61
CCDC113-203ENST00000561517 PICALMQ13492 652 aa18.89■□□□□ 0.61
CCDC113-203ENST00000561517 NOM1Q5C9Z4 860 aaKnown RBP18.89■□□□□ 0.61
CCDC113-203ENST00000561517 ERO1BQ86YB8 467 aa18.89■□□□□ 0.61
CCDC113-203ENST00000561517 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.89■□□□□ 0.61
CCDC113-203ENST00000561517 MS4A4AQ96JQ5 239 aa18.89■□□□□ 0.61
CCDC113-203ENST00000561517 COL2A1P02458 1487 aaPredicted RBP18.89■□□□□ 0.61
CCDC113-203ENST00000561517 IGF2BP3O00425 579 aaKnown RBP eCLIP18.88■□□□□ 0.61
CCDC113-203ENST00000561517 TBC1D8O95759 1140 aa18.88■□□□□ 0.61
CCDC113-203ENST00000561517 BAG3O95817 575 aa18.88■□□□□ 0.61
CCDC113-203ENST00000561517 INPP5BP32019 993 aa18.88■□□□□ 0.61
CCDC113-203ENST00000561517 ADGRA1Q86SQ6 560 aa18.88■□□□□ 0.61
CCDC113-203ENST00000561517 NOL10Q9BSC4 688 aaKnown RBP18.88■□□□□ 0.61
CCDC113-203ENST00000561517 ANTXR1Q9H6X2 564 aa18.88■□□□□ 0.61
CCDC113-203ENST00000561517 NDUFB9Q9Y6M9 179 aa18.88■□□□□ 0.61
CCDC113-203ENST00000561517 IDH1O75874 414 aaKnown RBP18.87■□□□□ 0.61
CCDC113-203ENST00000561517 PLCG2P16885 1265 aa18.87■□□□□ 0.61
CCDC113-203ENST00000561517 NOL9Q5SY16 702 aaKnown RBP18.87■□□□□ 0.61
CCDC113-203ENST00000561517 TMED8Q6PL24 325 aaPredicted RBP18.87■□□□□ 0.61
CCDC113-203ENST00000561517 ZSCAN29Q8IWY8 852 aaPredicted RBP18.87■□□□□ 0.61
CCDC113-203ENST00000561517 TEX11Q8IYF3 940 aa18.87■□□□□ 0.61
CCDC113-203ENST00000561517 SH3RF3Q8TEJ3 882 aaPredicted RBP18.87■□□□□ 0.61
CCDC113-203ENST00000561517 OTUD5Q96G74 571 aa18.87■□□□□ 0.61
CCDC113-203ENST00000561517 LRRCC1Q9C099 1032 aa18.87■□□□□ 0.61
CCDC113-203ENST00000561517 DCTPP1Q9H773 170 aa18.87■□□□□ 0.61
CCDC113-203ENST00000561517 AATFQ9NY61 560 aaKnown RBP eCLIP18.87■□□□□ 0.61
CCDC113-203ENST00000561517 PHF20L1A8MW92 1017 aa18.86■□□□□ 0.61
CCDC113-203ENST00000561517 GTF2A2P52657 109 aa18.86■□□□□ 0.61
CCDC113-203ENST00000561517 PTPN18Q99952 460 aa18.86■□□□□ 0.61
CCDC113-203ENST00000561517 OSBPL5Q9H0X9 879 aaPredicted RBP18.86■□□□□ 0.61
CCDC113-203ENST00000561517 MYH1P12882 1939 aa18.86■□□□□ 0.61
CCDC113-203ENST00000561517 MYH7P12883 1935 aa18.86■□□□□ 0.61
CCDC113-203ENST00000561517 DOCK1Q14185 1865 aa18.86■□□□□ 0.61
CCDC113-203ENST00000561517 SIPA1L1O43166 1804 aa18.86■□□□□ 0.61
CCDC113-203ENST00000561517 TBC1D12O60347 775 aa18.85■□□□□ 0.61
CCDC113-203ENST00000561517 CYP7A1P22680 504 aa18.85■□□□□ 0.61
CCDC113-203ENST00000561517 PPATQ06203 517 aa18.85■□□□□ 0.61
CCDC113-203ENST00000561517 MAP3K12Q12852 859 aa18.85■□□□□ 0.61
CCDC113-203ENST00000561517 PPIL2Q13356 520 aa18.85■□□□□ 0.61
CCDC113-203ENST00000561517 TTF1Q15361 905 aaPredicted RBP18.85■□□□□ 0.61
CCDC113-203ENST00000561517 OTUD7BQ6GQQ9 843 aa18.85■□□□□ 0.61
CCDC113-203ENST00000561517 BRI3BPQ8WY22 251 aa18.85■□□□□ 0.61
CCDC113-203ENST00000561517 R3HDMLQ9H3Y0 253 aa18.85■□□□□ 0.61
CCDC113-203ENST00000561517 PCDHB15Q9Y5E8 787 aa18.85■□□□□ 0.61
CCDC113-203ENST00000561517 PTPRFP10586 1907 aa18.84■□□□□ 0.61
CCDC113-203ENST00000561517 PHIPQ8WWQ0 1821 aa18.84■□□□□ 0.61
CCDC113-203ENST00000561517 GPR25O00155 361 aa18.84■□□□□ 0.61
CCDC113-203ENST00000561517 IRF6O14896 467 aa18.84■□□□□ 0.61
CCDC113-203ENST00000561517 ATP5JP18859 108 aa18.84■□□□□ 0.61
CCDC113-203ENST00000561517 MAGEB6Q8N7X4 407 aa18.84■□□□□ 0.61
CCDC113-203ENST00000561517 CCL15-CCL14A0A0B4J2E2 113 aa18.83■□□□□ 0.6
CCDC113-203ENST00000561517 SMARCA5O60264 1052 aaPredicted RBP18.83■□□□□ 0.6
CCDC113-203ENST00000561517 CCL15Q16663 113 aa18.83■□□□□ 0.6
CCDC113-203ENST00000561517 CERS3Q8IU89 383 aa18.83■□□□□ 0.6
CCDC113-203ENST00000561517 ZNF296Q8WUU4 475 aaPredicted RBP18.83■□□□□ 0.6
CCDC113-203ENST00000561517 CRBNQ96SW2 442 aa18.83■□□□□ 0.6
CCDC113-203ENST00000561517 MCOLN1Q9GZU1 580 aa18.83■□□□□ 0.6
CCDC113-203ENST00000561517 ATAD5Q96QE3 1844 aa18.83■□□□□ 0.6
CCDC113-203ENST00000561517 SLURP2P0DP57 97 aa18.82■□□□□ 0.6
CCDC113-203ENST00000561517 CETPP11597 493 aa18.82■□□□□ 0.6
CCDC113-203ENST00000561517 DYNLL1P63167 89 aaKnown RBP18.82■□□□□ 0.6
CCDC113-203ENST00000561517 SNAPC2Q13487 334 aa18.82■□□□□ 0.6
CCDC113-203ENST00000561517 DGKZQ13574 1117 aa18.82■□□□□ 0.6
CCDC113-203ENST00000561517 TGFBRAP1Q8WUH2 860 aa18.82■□□□□ 0.6
CCDC113-203ENST00000561517 ABHD8Q96I13 439 aa18.82■□□□□ 0.6
CCDC113-203ENST00000561517 BCL11AQ9H165 835 aa18.82■□□□□ 0.6
CCDC113-203ENST00000561517 DHX36Q9H2U1 1008 aaKnown RBP18.82■□□□□ 0.6
CCDC113-203ENST00000561517 KCNH4Q9UQ05 1017 aa18.82■□□□□ 0.6
CCDC113-203ENST00000561517 FLT1P17948 1338 aa18.81■□□□□ 0.6
CCDC113-203ENST00000561517 GOLIM4O00461 696 aa18.81■□□□□ 0.6
CCDC113-203ENST00000561517 CTNND1O60716 968 aaKnown RBP18.81■□□□□ 0.6
CCDC113-203ENST00000561517 SCYL3Q8IZE3 742 aa18.81■□□□□ 0.6
CCDC113-203ENST00000561517 DNAJC2Q99543 621 aaKnown RBP18.81■□□□□ 0.6
CCDC113-203ENST00000561517 BOLA2Q9H3K6 86 aa18.81■□□□□ 0.6
CCDC113-203ENST00000561517 FKTNO75072 461 aa18.8■□□□□ 0.6
CCDC113-203ENST00000561517 CRHR2Q13324 411 aa18.8■□□□□ 0.6
CCDC113-203ENST00000561517 CTU1Q7Z7A3 348 aaKnown RBP18.8■□□□□ 0.6
CCDC113-203ENST00000561517 MAPKAPK5Q8IW41 473 aa18.8■□□□□ 0.6
CCDC113-203ENST00000561517 FAM43AQ8N2R8 423 aa18.8■□□□□ 0.6
CCDC113-203ENST00000561517 MIGA1Q8NAN2 632 aa18.8■□□□□ 0.6
CCDC113-203ENST00000561517 HAUS7Q99871 368 aa18.8■□□□□ 0.6
CCDC113-203ENST00000561517 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.8■□□□□ 0.6
CCDC113-203ENST00000561517 ZCCHC17Q9NP64 241 aaKnown RBP18.8■□□□□ 0.6
CCDC113-203ENST00000561517 PAG1Q9NWQ8 432 aa18.8■□□□□ 0.6
CCDC113-203ENST00000561517 PI4KBQ9UBF8 816 aa18.8■□□□□ 0.6
CCDC113-203ENST00000561517 PDE6AP16499 860 aa18.79■□□□□ 0.6
CCDC113-203ENST00000561517 PTPRAP18433 802 aa18.79■□□□□ 0.6
CCDC113-203ENST00000561517 SLC9C2Q5TAH2 1124 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms