RNA–Protein interactions for RNA: ENST00000560944.1

CERS3-208, Transcript of ceramide synthase 3, human

TSL 3

Gene CERS3, Length 448 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CERS3-208	ENST00000560944	NOL10	Q9BSC4	688 aa	Known RBP	13.54	□□□□□ -0.24
CERS3-208	ENST00000560944	HELLS	Q9NRZ9	838 aa		13.54	□□□□□ -0.24
CERS3-208	ENST00000560944	TAF6L	Q9Y6J9	622 aa		13.54	□□□□□ -0.24
CERS3-208	ENST00000560944	DDTL	A6NHG4	134 aa	Predicted RBP	13.53	□□□□□ -0.24
CERS3-208	ENST00000560944	SEC24B	O95487	1268 aa		13.53	□□□□□ -0.24
CERS3-208	ENST00000560944	BAG3	O95817	575 aa		13.53	□□□□□ -0.24
CERS3-208	ENST00000560944	USP5	P45974	858 aa		13.53	□□□□□ -0.24
CERS3-208	ENST00000560944	RASA3	Q14644	834 aa		13.53	□□□□□ -0.24
CERS3-208	ENST00000560944	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.53	□□□□□ -0.24
CERS3-208	ENST00000560944	C8orf34	Q49A92	452 aa		13.53	□□□□□ -0.24
CERS3-208	ENST00000560944	LDHD	Q86WU2	507 aa		13.53	□□□□□ -0.24
CERS3-208	ENST00000560944	TEPSIN	Q96N21	525 aa		13.53	□□□□□ -0.24
CERS3-208	ENST00000560944	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.53	□□□□□ -0.24
CERS3-208	ENST00000560944	DCP1A	Q9NPI6	582 aa	Predicted RBP	13.53	□□□□□ -0.24
CERS3-208	ENST00000560944	MKRN1	Q9UHC7	482 aa	Known RBP	13.53	□□□□□ -0.24
CERS3-208	ENST00000560944	PGAP2	Q9UHJ9	254 aa		13.53	□□□□□ -0.24
CERS3-208	ENST00000560944	PALD1	Q9ULE6	856 aa		13.53	□□□□□ -0.24
CERS3-208	ENST00000560944	TACC3	Q9Y6A5	838 aa		13.53	□□□□□ -0.24
CERS3-208	ENST00000560944	NBPF12	Q5TAG4	269 aa	Predicted RBP	13.52	□□□□□ -0.25
CERS3-208	ENST00000560944	NKX2-3	Q8TAU0	364 aa		13.52	□□□□□ -0.25
CERS3-208	ENST00000560944	IDI2	Q9BXS1	227 aa		13.52	□□□□□ -0.25
CERS3-208	ENST00000560944	LSG1	Q9H089	658 aa	Known RBP	13.52	□□□□□ -0.25
CERS3-208	ENST00000560944	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.52	□□□□□ -0.25
CERS3-208	ENST00000560944	DEFB129	Q9H1M3	183 aa		13.52	□□□□□ -0.25
CERS3-208	ENST00000560944	TMOD2	Q9NZR1	351 aa		13.52	□□□□□ -0.25
CERS3-208	ENST00000560944	LAMA4	Q16363	1823 aa		13.51	□□□□□ -0.25
CERS3-208	ENST00000560944	ATRNL1	Q5VV63	1379 aa		13.51	□□□□□ -0.25
CERS3-208	ENST00000560944	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.51	□□□□□ -0.25
CERS3-208	ENST00000560944	HIP1	O00291	1037 aa		13.51	□□□□□ -0.25
CERS3-208	ENST00000560944	MYO1B	O43795	1136 aa		13.51	□□□□□ -0.25
CERS3-208	ENST00000560944	HSPD1	P10809	573 aa	Known RBP	13.51	□□□□□ -0.25
CERS3-208	ENST00000560944	HAND2	P61296	217 aa		13.51	□□□□□ -0.25
CERS3-208	ENST00000560944	PRKG1	Q13976	671 aa		13.51	□□□□□ -0.25
CERS3-208	ENST00000560944	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.51	□□□□□ -0.25
CERS3-208	ENST00000560944	MOB2	Q70IA6	237 aa		13.51	□□□□□ -0.25
CERS3-208	ENST00000560944	PNMA8A	Q86V59	439 aa	Predicted RBP	13.51	□□□□□ -0.25
CERS3-208	ENST00000560944	APOBEC3F	Q8IUX4	373 aa	Known RBP	13.51	□□□□□ -0.25
CERS3-208	ENST00000560944	SLC44A5	Q8NCS7	719 aa		13.51	□□□□□ -0.25
CERS3-208	ENST00000560944	CDCA5	Q96FF9	252 aa		13.51	□□□□□ -0.25
CERS3-208	ENST00000560944	DYNLL2	Q96FJ2	89 aa		13.51	□□□□□ -0.25
CERS3-208	ENST00000560944	NBPF3	Q9H094	633 aa		13.51	□□□□□ -0.25
CERS3-208	ENST00000560944	INCENP	Q9NQS7	918 aa		13.51	□□□□□ -0.25
CERS3-208	ENST00000560944	OTOF	Q9HC10	1997 aa		13.51	□□□□□ -0.25
CERS3-208	ENST00000560944	RAD50	Q92878	1312 aa		13.5	□□□□□ -0.25
CERS3-208	ENST00000560944	PITPNM2	Q9BZ72	1349 aa		13.5	□□□□□ -0.25
CERS3-208	ENST00000560944	APP	P05067	770 aa		13.5	□□□□□ -0.25
CERS3-208	ENST00000560944	PLCG2	P16885	1265 aa		13.5	□□□□□ -0.25
CERS3-208	ENST00000560944	PLCD1	P51178	756 aa		13.5	□□□□□ -0.25
CERS3-208	ENST00000560944	COL9A3	Q14050	684 aa	Predicted RBP	13.5	□□□□□ -0.25
CERS3-208	ENST00000560944	CHADL	Q6NUI6	762 aa		13.5	□□□□□ -0.25
CERS3-208	ENST00000560944	SULF1	Q8IWU6	871 aa		13.5	□□□□□ -0.25
CERS3-208	ENST00000560944	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.5	□□□□□ -0.25
CERS3-208	ENST00000560944	DCPS	Q96C86	337 aa	Known RBP	13.5	□□□□□ -0.25
CERS3-208	ENST00000560944	DNAJC18	Q9H819	358 aa		13.5	□□□□□ -0.25
CERS3-208	ENST00000560944	ZNF408	Q9H9D4	720 aa		13.5	□□□□□ -0.25
CERS3-208	ENST00000560944	MCM9	Q9NXL9	1143 aa		13.5	□□□□□ -0.25
CERS3-208	ENST00000560944	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.5	□□□□□ -0.25
CERS3-208	ENST00000560944	PAPPA2	Q9BXP8	1791 aa		13.5	□□□□□ -0.25
CERS3-208	ENST00000560944	USP17L12	C9JPN9	530 aa		13.49	□□□□□ -0.25
CERS3-208	ENST00000560944	USP17L21	D6R901	530 aa		13.49	□□□□□ -0.25
CERS3-208	ENST00000560944	TDO2	P48775	406 aa		13.49	□□□□□ -0.25
CERS3-208	ENST00000560944	MFAP1	P55081	439 aa	Known RBP	13.49	□□□□□ -0.25
CERS3-208	ENST00000560944	RRP1B	Q14684	758 aa	Known RBP	13.49	□□□□□ -0.25
CERS3-208	ENST00000560944	CTR9	Q6PD62	1173 aa		13.49	□□□□□ -0.25
CERS3-208	ENST00000560944	MIGA2	Q7L4E1	593 aa		13.49	□□□□□ -0.25
CERS3-208	ENST00000560944	IFNL3	Q8IZI9	196 aa		13.49	□□□□□ -0.25
CERS3-208	ENST00000560944	FAM151A	Q8WW52	585 aa		13.49	□□□□□ -0.25
CERS3-208	ENST00000560944	ANO2	Q9NQ90	1003 aa		13.49	□□□□□ -0.25
CERS3-208	ENST00000560944	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.49	□□□□□ -0.25
CERS3-208	ENST00000560944	MINDY4B	A8MYZ0	360 aa		13.48	□□□□□ -0.25
CERS3-208	ENST00000560944	PATL2	C9JE40	543 aa	Known RBP	13.48	□□□□□ -0.25
CERS3-208	ENST00000560944	ITGBL1	O95965	494 aa	Predicted RBP	13.48	□□□□□ -0.25
CERS3-208	ENST00000560944	MMP14	P50281	582 aa		13.48	□□□□□ -0.25
CERS3-208	ENST00000560944	CTDSPL2	Q05D32	466 aa		13.48	□□□□□ -0.25
CERS3-208	ENST00000560944	TBC1D10C	Q8IV04	446 aa		13.48	□□□□□ -0.25
CERS3-208	ENST00000560944	ZC3H15	Q8WU90	426 aa	Known RBP	13.48	□□□□□ -0.25
CERS3-208	ENST00000560944	CSRNP1	Q96S65	589 aa		13.48	□□□□□ -0.25
CERS3-208	ENST00000560944	RBM8A	Q9Y5S9	174 aa	Known RBP	13.48	□□□□□ -0.25
CERS3-208	ENST00000560944	ENTPD3	O75355	529 aa		13.47	□□□□□ -0.25
CERS3-208	ENST00000560944	FGA	P02671	866 aa		13.47	□□□□□ -0.25
CERS3-208	ENST00000560944	JAG1	P78504	1218 aa		13.47	□□□□□ -0.25
CERS3-208	ENST00000560944	FKBP1C	Q5VVH2	108 aa		13.47	□□□□□ -0.25
CERS3-208	ENST00000560944	TMED8	Q6PL24	325 aa	Predicted RBP	13.47	□□□□□ -0.25
CERS3-208	ENST00000560944	FAM83A	Q86UY5	434 aa		13.47	□□□□□ -0.25
CERS3-208	ENST00000560944	RUFY2	Q8WXA3	655 aa		13.47	□□□□□ -0.25
CERS3-208	ENST00000560944	NAPB	Q9H115	298 aa		13.47	□□□□□ -0.25
CERS3-208	ENST00000560944	COL2A1	P02458	1487 aa	Predicted RBP	13.47	□□□□□ -0.25
CERS3-208	ENST00000560944	TRPM7	Q96QT4	1865 aa		13.46	□□□□□ -0.25
CERS3-208	ENST00000560944	IGSF3	O75054	1194 aa		13.46	□□□□□ -0.25
CERS3-208	ENST00000560944	PRDM1	O75626	825 aa		13.46	□□□□□ -0.25
CERS3-208	ENST00000560944	POLR3D	P05423	398 aa	Predicted RBP	13.46	□□□□□ -0.25
CERS3-208	ENST00000560944	CDC37L1	Q7L3B6	337 aa		13.46	□□□□□ -0.25
CERS3-208	ENST00000560944	CCDC84	Q86UT8	332 aa	Predicted RBP	13.46	□□□□□ -0.25
CERS3-208	ENST00000560944	ATP8A2	Q9NTI2	1148 aa		13.46	□□□□□ -0.25
CERS3-208	ENST00000560944	CELF2	O95319	508 aa	Known RBP	13.45	□□□□□ -0.26
CERS3-208	ENST00000560944	GNAT2	P19087	354 aa		13.45	□□□□□ -0.26
CERS3-208	ENST00000560944	TNNI2	P48788	182 aa		13.45	□□□□□ -0.26
CERS3-208	ENST00000560944	PPARA	Q07869	468 aa		13.45	□□□□□ -0.26
CERS3-208	ENST00000560944	TNFAIP1	Q13829	316 aa		13.45	□□□□□ -0.26
CERS3-208	ENST00000560944	C12orf60	Q5U649	245 aa		13.45	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms