RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 PRPF40BQ6NWY9 871 aaKnown RBP7.92□□□□□ -1.14
PSMA4-221ENST00000560842 FBXO33Q7Z6M2 555 aa7.92□□□□□ -1.14
PSMA4-221ENST00000560842 PLD6Q8N2A8 252 aaKnown RBP7.92□□□□□ -1.14
PSMA4-221ENST00000560842 BHLHE22Q8NFJ8 381 aaPredicted RBP7.92□□□□□ -1.14
PSMA4-221ENST00000560842 EPS8L3Q8TE67 593 aaKnown RBP7.92□□□□□ -1.14
PSMA4-221ENST00000560842 FAM84AQ96KN4 292 aa7.92□□□□□ -1.14
PSMA4-221ENST00000560842 KRTAP4-5Q9BYR2 181 aa7.92□□□□□ -1.14
PSMA4-221ENST00000560842 LGR6Q9HBX8 967 aa7.92□□□□□ -1.14
PSMA4-221ENST00000560842 SYNGAP1Q96PV0 1343 aa7.92□□□□□ -1.14
PSMA4-221ENST00000560842 ECEL1O95672 775 aa7.91□□□□□ -1.14
PSMA4-221ENST00000560842 MAPK8P45983 427 aa7.91□□□□□ -1.14
PSMA4-221ENST00000560842 PRKCQQ04759 706 aa7.91□□□□□ -1.14
PSMA4-221ENST00000560842 LRRN4CLQ8ND94 238 aa7.91□□□□□ -1.14
PSMA4-221ENST00000560842 PI4K2BQ8TCG2 481 aa7.91□□□□□ -1.14
PSMA4-221ENST00000560842 CORO1BQ9BR76 489 aa7.91□□□□□ -1.14
PSMA4-221ENST00000560842 TRIM56Q9BRZ2 755 aaKnown RBP7.91□□□□□ -1.14
PSMA4-221ENST00000560842 AOC2O75106 756 aa7.9□□□□□ -1.14
PSMA4-221ENST00000560842 MFAP1P55081 439 aaKnown RBP7.9□□□□□ -1.14
PSMA4-221ENST00000560842 PTPN12Q05209 780 aaKnown RBP7.9□□□□□ -1.14
PSMA4-221ENST00000560842 SETDB2Q96T68 719 aa7.9□□□□□ -1.14
PSMA4-221ENST00000560842 LIN7BQ9HAP6 207 aa7.9□□□□□ -1.14
PSMA4-221ENST00000560842 WWC3Q9ULE0 1092 aa7.9□□□□□ -1.14
PSMA4-221ENST00000560842 PRPF40AO75400 957 aaKnown RBP7.89□□□□□ -1.15
PSMA4-221ENST00000560842 LDHBP07195 334 aaKnown RBP7.89□□□□□ -1.15
PSMA4-221ENST00000560842 ITPKAP23677 461 aa7.89□□□□□ -1.15
PSMA4-221ENST00000560842 GRIA4P48058 902 aa7.89□□□□□ -1.15
PSMA4-221ENST00000560842 FGD1P98174 961 aa7.89□□□□□ -1.15
PSMA4-221ENST00000560842 SPRED3Q2MJR0 410 aa7.89□□□□□ -1.15
PSMA4-221ENST00000560842 EAPPQ56P03 285 aaPredicted RBP7.89□□□□□ -1.15
PSMA4-221ENST00000560842 CILP2Q8IUL8 1156 aa7.89□□□□□ -1.15
PSMA4-221ENST00000560842 DDX54Q8TDD1 881 aaKnown RBP7.89□□□□□ -1.15
PSMA4-221ENST00000560842 GIPC1O14908 333 aa7.88□□□□□ -1.15
PSMA4-221ENST00000560842 FAM87AP0C7U9 286 aa7.88□□□□□ -1.15
PSMA4-221ENST00000560842 GRM2Q14416 872 aa7.88□□□□□ -1.15
PSMA4-221ENST00000560842 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.88□□□□□ -1.15
PSMA4-221ENST00000560842 PI16Q6UXB8 463 aa7.88□□□□□ -1.15
PSMA4-221ENST00000560842 FAM181AQ8N9Y4 354 aa7.88□□□□□ -1.15
PSMA4-221ENST00000560842 FRMD6Q96NE9 622 aa7.88□□□□□ -1.15
PSMA4-221ENST00000560842 WDR18Q9BV38 432 aa7.88□□□□□ -1.15
PSMA4-221ENST00000560842 EHD4Q9H223 541 aa7.88□□□□□ -1.15
PSMA4-221ENST00000560842 ABCB6Q9NP58 842 aa7.88□□□□□ -1.15
PSMA4-221ENST00000560842 NLRP2Q9NX02 1062 aa7.88□□□□□ -1.15
PSMA4-221ENST00000560842 PPP1R9AQ9ULJ8 1098 aa7.88□□□□□ -1.15
PSMA4-221ENST00000560842 TRAK1Q9UPV9 953 aa7.88□□□□□ -1.15
PSMA4-221ENST00000560842 B3GALT4O96024 378 aa7.87□□□□□ -1.15
PSMA4-221ENST00000560842 CD96P40200 585 aa7.87□□□□□ -1.15
PSMA4-221ENST00000560842 ATP2B2Q01814 1243 aa7.87□□□□□ -1.15
PSMA4-221ENST00000560842 MKNK2Q9HBH9 465 aa7.87□□□□□ -1.15
PSMA4-221ENST00000560842 TMEM238LA0A1B0GVL6 79 aa7.86□□□□□ -1.15
PSMA4-221ENST00000560842 CDK5R2Q13319 367 aa7.86□□□□□ -1.15
PSMA4-221ENST00000560842 IFI16Q16666 785 aaKnown RBP7.86□□□□□ -1.15
PSMA4-221ENST00000560842 BCO2Q9BYV7 579 aa7.86□□□□□ -1.15
PSMA4-221ENST00000560842 SRCIN1Q9C0H9 1055 aa7.86□□□□□ -1.15
PSMA4-221ENST00000560842 LRRC10BA6NIK2 292 aa7.85□□□□□ -1.15
PSMA4-221ENST00000560842 GADD45BO75293 160 aaPredicted RBP7.85□□□□□ -1.15
PSMA4-221ENST00000560842 ZNF865P0CJ78 1059 aaPredicted RBP7.85□□□□□ -1.15
PSMA4-221ENST00000560842 AOC3Q16853 763 aa7.85□□□□□ -1.15
PSMA4-221ENST00000560842 ANKRD24Q8TF21 1146 aa7.85□□□□□ -1.15
PSMA4-221ENST00000560842 HRASLS5Q96KN8 279 aa7.85□□□□□ -1.15
PSMA4-221ENST00000560842 OSBPL7Q9BZF2 842 aa7.85□□□□□ -1.15
PSMA4-221ENST00000560842 FAM53CQ9NYF3 392 aa7.85□□□□□ -1.15
PSMA4-221ENST00000560842 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.85□□□□□ -1.15
PSMA4-221ENST00000560842 U3KQE9 123 aa7.85□□□□□ -1.15
PSMA4-221ENST00000560842 TMPRSS2O15393 492 aa7.84□□□□□ -1.15
PSMA4-221ENST00000560842 XRCC5P13010 732 aaKnown RBP7.84□□□□□ -1.15
PSMA4-221ENST00000560842 GNA15P30679 374 aa7.84□□□□□ -1.15
PSMA4-221ENST00000560842 PDE3AQ14432 1141 aa7.84□□□□□ -1.15
PSMA4-221ENST00000560842 RPS26P11Q5JNZ5 115 aaPredicted RBP7.84□□□□□ -1.15
PSMA4-221ENST00000560842 LCE5AQ5TCM9 118 aa7.84□□□□□ -1.15
PSMA4-221ENST00000560842 SLC23A3Q6PIS1 610 aa7.84□□□□□ -1.15
PSMA4-221ENST00000560842 FLAD1Q8NFF5 587 aa7.84□□□□□ -1.15
PSMA4-221ENST00000560842 TOX2Q96NM4 488 aa7.84□□□□□ -1.15
PSMA4-221ENST00000560842 ZNF576Q9H609 170 aa7.84□□□□□ -1.15
PSMA4-221ENST00000560842 CRIM1Q9NZV1 1036 aa7.84□□□□□ -1.15
PSMA4-221ENST00000560842 CFPP27918 469 aa7.83□□□□□ -1.16
PSMA4-221ENST00000560842 OXCT1P55809 520 aa7.83□□□□□ -1.16
PSMA4-221ENST00000560842 NXPE4Q6UWF7 544 aa7.83□□□□□ -1.16
PSMA4-221ENST00000560842 ZSWIM9Q86XI8 627 aa7.83□□□□□ -1.16
PSMA4-221ENST00000560842 C3orf58Q8NDZ4 430 aa7.83□□□□□ -1.16
PSMA4-221ENST00000560842 PLAGL2Q9UPG8 496 aa7.83□□□□□ -1.16
PSMA4-221ENST00000560842 SPG7Q9UQ90 795 aa7.83□□□□□ -1.16
PSMA4-221ENST00000560842 TMEM265A0A087WTH1 108 aa7.82□□□□□ -1.16
PSMA4-221ENST00000560842 ZNF503-AS2A6NEH8 195 aa7.82□□□□□ -1.16
PSMA4-221ENST00000560842 RAP1GAPP47736 663 aa7.82□□□□□ -1.16
PSMA4-221ENST00000560842 AP3B2Q13367 1082 aa7.82□□□□□ -1.16
PSMA4-221ENST00000560842 FANCD2OSQ96PS1 177 aa7.82□□□□□ -1.16
PSMA4-221ENST00000560842 DUSP9Q99956 384 aaKnown RBP7.82□□□□□ -1.16
PSMA4-221ENST00000560842 ATXN3LQ9H3M9 355 aa7.82□□□□□ -1.16
PSMA4-221ENST00000560842 C12orf49Q9H741 205 aa7.82□□□□□ -1.16
PSMA4-221ENST00000560842 PIDD1Q9HB75 910 aa7.82□□□□□ -1.16
PSMA4-221ENST00000560842 PPP4R2Q9NY27 417 aa7.82□□□□□ -1.16
PSMA4-221ENST00000560842 CEACAM5P06731 702 aa7.81□□□□□ -1.16
PSMA4-221ENST00000560842 DAB2P98082 770 aa7.81□□□□□ -1.16
PSMA4-221ENST00000560842 TAGLNQ01995 201 aaKnown RBP7.81□□□□□ -1.16
PSMA4-221ENST00000560842 ANGEL2Q5VTE6 544 aaKnown RBP7.81□□□□□ -1.16
PSMA4-221ENST00000560842 TMC4Q7Z404 712 aa7.81□□□□□ -1.16
PSMA4-221ENST00000560842 C1QL4Q86Z23 238 aa7.81□□□□□ -1.16
PSMA4-221ENST00000560842 SMYD4Q8IYR2 804 aaPredicted RBP7.81□□□□□ -1.16
PSMA4-221ENST00000560842 WDR89Q96FK6 387 aaPredicted RBP7.81□□□□□ -1.16
PSMA4-221ENST00000560842 RNF19AQ9NV58 838 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms