RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 A0A0G2JLL6 359 aaPredicted RBP11.66□□□□□ -0.54
SMAD3-215ENST00000560424 MDM2Q00987 491 aaPredicted RBP11.66□□□□□ -0.54
SMAD3-215ENST00000560424 CCDC27Q2M243 656 aa11.66□□□□□ -0.54
SMAD3-215ENST00000560424 FAM109BQ6ICB4 259 aaPredicted RBP11.66□□□□□ -0.54
SMAD3-215ENST00000560424 APOBEC3HQ6NTF7 200 aaKnown RBP11.66□□□□□ -0.54
SMAD3-215ENST00000560424 HHIPL2Q6UWX4 724 aa11.66□□□□□ -0.54
SMAD3-215ENST00000560424 PRRT2Q7Z6L0 340 aaPredicted RBP11.66□□□□□ -0.54
SMAD3-215ENST00000560424 ANKRD13CQ8N6S4 541 aa11.66□□□□□ -0.54
SMAD3-215ENST00000560424 SYMPKQ92797 1274 aaKnown RBP11.66□□□□□ -0.54
SMAD3-215ENST00000560424 TSR2Q969E8 191 aaKnown RBP11.66□□□□□ -0.54
SMAD3-215ENST00000560424 GUCD1Q96NT3 240 aa11.66□□□□□ -0.54
SMAD3-215ENST00000560424 LBHD1Q9BQE6 289 aaPredicted RBP11.66□□□□□ -0.54
SMAD3-215ENST00000560424 ZNF112Q9UJU3 913 aa11.66□□□□□ -0.54
SMAD3-215ENST00000560424 SUGT1Q9Y2Z0 365 aa11.66□□□□□ -0.54
SMAD3-215ENST00000560424 DDX60LQ5H9U9 1706 aaKnown RBP11.66□□□□□ -0.54
SMAD3-215ENST00000560424 SCYL3Q8IZE3 742 aa11.65□□□□□ -0.54
SMAD3-215ENST00000560424 C9orf78Q9NZ63 289 aaPredicted RBP11.65□□□□□ -0.54
SMAD3-215ENST00000560424 LRRFIP2Q9Y608 721 aaKnown RBP11.65□□□□□ -0.54
SMAD3-215ENST00000560424 VCANP13611 3396 aa11.64□□□□□ -0.55
SMAD3-215ENST00000560424 TRIM75PA6NK02 468 aa11.64□□□□□ -0.55
SMAD3-215ENST00000560424 FAM110CQ1W6H9 321 aa11.64□□□□□ -0.55
SMAD3-215ENST00000560424 METTL24Q5JXM2 366 aa11.64□□□□□ -0.55
SMAD3-215ENST00000560424 FBXO33Q7Z6M2 555 aa11.64□□□□□ -0.55
SMAD3-215ENST00000560424 ZSCAN29Q8IWY8 852 aaPredicted RBP11.64□□□□□ -0.55
SMAD3-215ENST00000560424 MAFAQ8NHW3 353 aaPredicted RBP11.64□□□□□ -0.55
SMAD3-215ENST00000560424 POTEB2H3BUK9 544 aa11.63□□□□□ -0.55
SMAD3-215ENST00000560424 PTPRAP18433 802 aa11.63□□□□□ -0.55
SMAD3-215ENST00000560424 PRKAG2Q9UGJ0 569 aa11.63□□□□□ -0.55
SMAD3-215ENST00000560424 AGTPBP1Q9UPW5 1226 aa11.63□□□□□ -0.55
SMAD3-215ENST00000560424 GRM8O00222 908 aa11.62□□□□□ -0.55
SMAD3-215ENST00000560424 COL9A1P20849 921 aa11.62□□□□□ -0.55
SMAD3-215ENST00000560424 PABPC4Q13310 644 aaKnown RBP eCLIP11.62□□□□□ -0.55
SMAD3-215ENST00000560424 EPHA10Q5JZY3 1008 aa11.62□□□□□ -0.55
SMAD3-215ENST00000560424 CDC42EP5Q6NZY7 148 aa11.62□□□□□ -0.55
SMAD3-215ENST00000560424 WDR66Q8TBY9 1149 aa11.62□□□□□ -0.55
SMAD3-215ENST00000560424 PUS3Q9BZE2 481 aaKnown RBP11.62□□□□□ -0.55
SMAD3-215ENST00000560424 USP40Q9NVE5 1235 aa11.62□□□□□ -0.55
SMAD3-215ENST00000560424 OGDHLQ9ULD0 1010 aa11.62□□□□□ -0.55
SMAD3-215ENST00000560424 AFG3L2Q9Y4W6 797 aa11.62□□□□□ -0.55
SMAD3-215ENST00000560424 F6X3S4 739 aa11.61□□□□□ -0.55
SMAD3-215ENST00000560424 IFIT1P09914 478 aaKnown RBP11.61□□□□□ -0.55
SMAD3-215ENST00000560424 PRKAR2AP13861 404 aaKnown RBP11.61□□□□□ -0.55
SMAD3-215ENST00000560424 GCLCP48506 637 aaPredicted RBP11.61□□□□□ -0.55
SMAD3-215ENST00000560424 NFIAQ12857 509 aa11.61□□□□□ -0.55
SMAD3-215ENST00000560424 PFASO15067 1338 aa11.6□□□□□ -0.55
SMAD3-215ENST00000560424 CYP2B6P20813 491 aa11.6□□□□□ -0.55
SMAD3-215ENST00000560424 TRIM32Q13049 653 aa11.6□□□□□ -0.55
SMAD3-215ENST00000560424 BEND3Q5T5X7 828 aa11.6□□□□□ -0.55
SMAD3-215ENST00000560424 CCAR1Q8IX12 1150 aaKnown RBP11.6□□□□□ -0.55
SMAD3-215ENST00000560424 CDX2Q99626 313 aaPredicted RBP11.6□□□□□ -0.55
SMAD3-215ENST00000560424 DAGLAQ9Y4D2 1042 aa11.6□□□□□ -0.55
SMAD3-215ENST00000560424 DOCK3Q8IZD9 2030 aa11.6□□□□□ -0.55
SMAD3-215ENST00000560424 DOCK2Q92608 1830 aa11.6□□□□□ -0.55
SMAD3-215ENST00000560424 CTNND1O60716 968 aaKnown RBP11.59□□□□□ -0.55
SMAD3-215ENST00000560424 PDE8BO95263 885 aa11.59□□□□□ -0.55
SMAD3-215ENST00000560424 FOSL2P15408 326 aa11.59□□□□□ -0.55
SMAD3-215ENST00000560424 PDE3AQ14432 1141 aa11.59□□□□□ -0.55
SMAD3-215ENST00000560424 DIXDC1Q155Q3 683 aa11.59□□□□□ -0.55
SMAD3-215ENST00000560424 SLC4A10Q6U841 1118 aa11.59□□□□□ -0.55
SMAD3-215ENST00000560424 WDR63Q8IWG1 891 aa11.59□□□□□ -0.55
SMAD3-215ENST00000560424 TRMT44Q8IYL2 757 aaKnown RBP11.59□□□□□ -0.55
SMAD3-215ENST00000560424 TRMT2AQ8IZ69 625 aaKnown RBP11.59□□□□□ -0.55
SMAD3-215ENST00000560424 PROCA1Q8NCQ7 364 aaPredicted RBP11.59□□□□□ -0.55
SMAD3-215ENST00000560424 TRIB2Q92519 343 aa11.59□□□□□ -0.55
SMAD3-215ENST00000560424 NUDT12Q9BQG2 462 aa11.59□□□□□ -0.55
SMAD3-215ENST00000560424 SPINK5Q9NQ38 1064 aaPredicted RBP11.59□□□□□ -0.55
SMAD3-215ENST00000560424 FAM198AQ9UFP1 575 aa11.59□□□□□ -0.55
SMAD3-215ENST00000560424 CACNA1FO60840 1977 aa11.59□□□□□ -0.55
SMAD3-215ENST00000560424 MYH13Q9UKX3 1938 aa11.58□□□□□ -0.55
SMAD3-215ENST00000560424 DOCK1Q14185 1865 aa11.58□□□□□ -0.56
SMAD3-215ENST00000560424 PHF20L1A8MW92 1017 aa11.58□□□□□ -0.56
SMAD3-215ENST00000560424 LDHBP07195 334 aaKnown RBP11.58□□□□□ -0.56
SMAD3-215ENST00000560424 ZKSCAN1P17029 563 aaPredicted RBP11.58□□□□□ -0.56
SMAD3-215ENST00000560424 PUM3Q15397 648 aaKnown RBP11.58□□□□□ -0.56
SMAD3-215ENST00000560424 LRRC26Q2I0M4 334 aa11.58□□□□□ -0.56
SMAD3-215ENST00000560424 TREML2Q5T2D2 321 aa11.58□□□□□ -0.56
SMAD3-215ENST00000560424 WWC1Q8IX03 1113 aa11.58□□□□□ -0.56
SMAD3-215ENST00000560424 SOCS4Q8WXH5 440 aa11.58□□□□□ -0.56
SMAD3-215ENST00000560424 CWC22Q9HCG8 908 aaKnown RBP11.58□□□□□ -0.56
SMAD3-215ENST00000560424 PTPRFP10586 1907 aa11.58□□□□□ -0.56
SMAD3-215ENST00000560424 ENTPD3O75355 529 aa11.57□□□□□ -0.56
SMAD3-215ENST00000560424 SLC5A1P13866 664 aa11.57□□□□□ -0.56
SMAD3-215ENST00000560424 RGS3P49796 1198 aa11.57□□□□□ -0.56
SMAD3-215ENST00000560424 IRX3P78415 501 aaPredicted RBP11.57□□□□□ -0.56
SMAD3-215ENST00000560424 LRRC24Q50LG9 513 aa11.57□□□□□ -0.56
SMAD3-215ENST00000560424 MYLIPQ8WY64 445 aa11.57□□□□□ -0.56
SMAD3-215ENST00000560424 SRCIN1Q9C0H9 1055 aa11.57□□□□□ -0.56
SMAD3-215ENST00000560424 SENP6Q9GZR1 1112 aaPredicted RBP11.57□□□□□ -0.56
SMAD3-215ENST00000560424 GJD2Q9UKL4 321 aa11.57□□□□□ -0.56
SMAD3-215ENST00000560424 IL16Q14005 1332 aa11.57□□□□□ -0.56
SMAD3-215ENST00000560424 KIF16BQ96L93 1317 aa11.57□□□□□ -0.56
SMAD3-215ENST00000560424 COL2A1P02458 1487 aaPredicted RBP11.57□□□□□ -0.56
SMAD3-215ENST00000560424 E9PSI1 815 aa11.56□□□□□ -0.56
SMAD3-215ENST00000560424 TNFRSF10AO00220 468 aa11.56□□□□□ -0.56
SMAD3-215ENST00000560424 ALDH1L1O75891 902 aa11.56□□□□□ -0.56
SMAD3-215ENST00000560424 COL6A1P12109 1028 aa11.56□□□□□ -0.56
SMAD3-215ENST00000560424 PRDX5P30044 214 aa11.56□□□□□ -0.56
SMAD3-215ENST00000560424 SLFN5Q08AF3 891 aa11.56□□□□□ -0.56
SMAD3-215ENST00000560424 SPP2Q13103 211 aa11.56□□□□□ -0.56
SMAD3-215ENST00000560424 PICALMQ13492 652 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms