RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 MIGA1Q8NAN2 632 aa14.48□□□□□ -0.09
RABGGTA-215ENST00000560207 SH3RF3Q8TEJ3 882 aaPredicted RBP14.48□□□□□ -0.09
RABGGTA-215ENST00000560207 OSBPL5Q9H0X9 879 aaPredicted RBP14.48□□□□□ -0.09
RABGGTA-215ENST00000560207 GBA2Q9HCG7 927 aaPredicted RBP14.48□□□□□ -0.09
RABGGTA-215ENST00000560207 DIAPH3Q9NSV4 1193 aa14.48□□□□□ -0.09
RABGGTA-215ENST00000560207 CNTNAP1P78357 1384 aa14.47□□□□□ -0.09
RABGGTA-215ENST00000560207 MYH8P13535 1937 aa14.47□□□□□ -0.09
RABGGTA-215ENST00000560207 TBC1D12O60347 775 aa14.47□□□□□ -0.09
RABGGTA-215ENST00000560207 IREB2P48200 963 aaKnown RBP14.47□□□□□ -0.09
RABGGTA-215ENST00000560207 MAP3K11Q16584 847 aa14.47□□□□□ -0.09
RABGGTA-215ENST00000560207 FOXP4Q8IVH2 680 aaPredicted RBP14.47□□□□□ -0.09
RABGGTA-215ENST00000560207 ZSCAN29Q8IWY8 852 aaPredicted RBP14.47□□□□□ -0.09
RABGGTA-215ENST00000560207 TEPSINQ96N21 525 aa14.47□□□□□ -0.09
RABGGTA-215ENST00000560207 NACAP1Q9BZK3 213 aa14.47□□□□□ -0.09
RABGGTA-215ENST00000560207 PI4KBQ9UBF8 816 aa14.47□□□□□ -0.09
RABGGTA-215ENST00000560207 FAM198AQ9UFP1 575 aa14.47□□□□□ -0.09
RABGGTA-215ENST00000560207 HERC5Q9UII4 1024 aaKnown RBP14.47□□□□□ -0.09
RABGGTA-215ENST00000560207 MBD4O95243 580 aa14.46□□□□□ -0.09
RABGGTA-215ENST00000560207 SDSP20132 328 aa14.46□□□□□ -0.09
RABGGTA-215ENST00000560207 NFIAQ12857 509 aa14.46□□□□□ -0.09
RABGGTA-215ENST00000560207 MCMDC2Q4G0Z9 681 aa14.46□□□□□ -0.09
RABGGTA-215ENST00000560207 CASC1Q6TDU7 716 aa14.46□□□□□ -0.09
RABGGTA-215ENST00000560207 TGFBRAP1Q8WUH2 860 aa14.46□□□□□ -0.09
RABGGTA-215ENST00000560207 CSRNP1Q96S65 589 aa14.46□□□□□ -0.09
RABGGTA-215ENST00000560207 STRBPQ96SI9 672 aaKnown RBP14.46□□□□□ -0.09
RABGGTA-215ENST00000560207 TMEM39BQ9GZU3 492 aa14.46□□□□□ -0.09
RABGGTA-215ENST00000560207 FLT1P17948 1338 aa14.45□□□□□ -0.1
RABGGTA-215ENST00000560207 RAD50Q92878 1312 aa14.45□□□□□ -0.1
RABGGTA-215ENST00000560207 LAMB1P07942 1786 aa14.45□□□□□ -0.1
RABGGTA-215ENST00000560207 BAZ2AQ9UIF9 1905 aaKnown RBP14.45□□□□□ -0.1
RABGGTA-215ENST00000560207 TRAF5O00463 557 aa14.45□□□□□ -0.1
RABGGTA-215ENST00000560207 EIF5BO60841 1220 aaKnown RBP14.45□□□□□ -0.1
RABGGTA-215ENST00000560207 CACNB3P54284 484 aa14.45□□□□□ -0.1
RABGGTA-215ENST00000560207 DYNLL1P63167 89 aaKnown RBP14.45□□□□□ -0.1
RABGGTA-215ENST00000560207 MAP3K10Q02779 954 aa14.45□□□□□ -0.1
RABGGTA-215ENST00000560207 TCP10Q12799 353 aa14.45□□□□□ -0.1
RABGGTA-215ENST00000560207 PICALMQ13492 652 aa14.45□□□□□ -0.1
RABGGTA-215ENST00000560207 TTLL12Q14166 644 aaPredicted RBP14.45□□□□□ -0.1
RABGGTA-215ENST00000560207 TRIM34Q9BYJ4 488 aa14.45□□□□□ -0.1
RABGGTA-215ENST00000560207 ZNF341Q9BYN7 854 aa14.45□□□□□ -0.1
RABGGTA-215ENST00000560207 PUS7LQ9H0K6 701 aaKnown RBP14.45□□□□□ -0.1
RABGGTA-215ENST00000560207 EHD4Q9H223 541 aa14.45□□□□□ -0.1
RABGGTA-215ENST00000560207 GINM1Q9NU53 330 aa14.45□□□□□ -0.1
RABGGTA-215ENST00000560207 TLL2Q9Y6L7 1015 aa14.45□□□□□ -0.1
RABGGTA-215ENST00000560207 DDX60LQ5H9U9 1706 aaKnown RBP14.44□□□□□ -0.1
RABGGTA-215ENST00000560207 PATL2C9JE40 543 aaKnown RBP14.44□□□□□ -0.1
RABGGTA-215ENST00000560207 GPAA1O43292 621 aa14.44□□□□□ -0.1
RABGGTA-215ENST00000560207 ECE1P42892 770 aa14.44□□□□□ -0.1
RABGGTA-215ENST00000560207 NBPF12Q5TAG4 269 aaPredicted RBP14.44□□□□□ -0.1
RABGGTA-215ENST00000560207 CST9Q5W186 159 aa14.44□□□□□ -0.1
RABGGTA-215ENST00000560207 ANKRD13AQ8IZ07 590 aa14.44□□□□□ -0.1
RABGGTA-215ENST00000560207 LCORLQ8N3X6 602 aa14.44□□□□□ -0.1
RABGGTA-215ENST00000560207 OSBP2Q969R2 916 aa14.44□□□□□ -0.1
RABGGTA-215ENST00000560207 CCDC102AQ96A19 550 aa14.44□□□□□ -0.1
RABGGTA-215ENST00000560207 ARMT1Q9H993 441 aa14.44□□□□□ -0.1
RABGGTA-215ENST00000560207 ZNF408Q9H9D4 720 aa14.44□□□□□ -0.1
RABGGTA-215ENST00000560207 ZNF287Q9HBT7 754 aa14.44□□□□□ -0.1
RABGGTA-215ENST00000560207 ARPP21Q9UBL0 812 aaPredicted RBP14.44□□□□□ -0.1
RABGGTA-215ENST00000560207 ABT1Q9ULW3 272 aaKnown RBP14.44□□□□□ -0.1
RABGGTA-215ENST00000560207 SLC4A4Q9Y6R1 1079 aa14.44□□□□□ -0.1
RABGGTA-215ENST00000560207 GSPT1P15170 499 aaKnown RBP14.43□□□□□ -0.1
RABGGTA-215ENST00000560207 NT5C2P49902 561 aa14.43□□□□□ -0.1
RABGGTA-215ENST00000560207 SAPCD2Q86UD0 394 aa14.43□□□□□ -0.1
RABGGTA-215ENST00000560207 METTL16Q86W50 562 aaKnown RBP14.43□□□□□ -0.1
RABGGTA-215ENST00000560207 MAPKAPK5Q8IW41 473 aa14.43□□□□□ -0.1
RABGGTA-215ENST00000560207 REM2Q8IYK8 340 aaPredicted RBP14.43□□□□□ -0.1
RABGGTA-215ENST00000560207 DCP1AQ9NPI6 582 aaPredicted RBP14.43□□□□□ -0.1
RABGGTA-215ENST00000560207 DDX4Q9NQI0 724 aaKnown RBP14.43□□□□□ -0.1
RABGGTA-215ENST00000560207 MKRN1Q9UHC7 482 aaKnown RBP14.43□□□□□ -0.1
RABGGTA-215ENST00000560207 ZMYM6O95789 1325 aa14.42□□□□□ -0.1
RABGGTA-215ENST00000560207 RASSF10A6NK89 507 aa14.42□□□□□ -0.1
RABGGTA-215ENST00000560207 POLR3DP05423 398 aaPredicted RBP14.42□□□□□ -0.1
RABGGTA-215ENST00000560207 SLC3A2P08195 630 aaKnown RBP14.42□□□□□ -0.1
RABGGTA-215ENST00000560207 HUNKP57058 714 aa14.42□□□□□ -0.1
RABGGTA-215ENST00000560207 DEFB115Q30KQ5 88 aa14.42□□□□□ -0.1
RABGGTA-215ENST00000560207 SBK1Q52WX2 424 aa14.42□□□□□ -0.1
RABGGTA-215ENST00000560207 CRACR2BQ8N4Y2 399 aaPredicted RBP14.42□□□□□ -0.1
RABGGTA-215ENST00000560207 TBC1D2Q9BYX2 928 aa14.42□□□□□ -0.1
RABGGTA-215ENST00000560207 MCM9Q9NXL9 1143 aa14.42□□□□□ -0.1
RABGGTA-215ENST00000560207 SWAP70Q9UH65 585 aa14.42□□□□□ -0.1
RABGGTA-215ENST00000560207 SERPINB13Q9UIV8 391 aa14.42□□□□□ -0.1
RABGGTA-215ENST00000560207 ANGEL1Q9UNK9 670 aaKnown RBP14.42□□□□□ -0.1
RABGGTA-215ENST00000560207 CSADQ9Y600 493 aa14.42□□□□□ -0.1
RABGGTA-215ENST00000560207 CCDC171Q6TFL3 1326 aa14.41□□□□□ -0.1
RABGGTA-215ENST00000560207 APPP05067 770 aa14.41□□□□□ -0.1
RABGGTA-215ENST00000560207 MAP3K9P80192 1104 aa14.41□□□□□ -0.1
RABGGTA-215ENST00000560207 ALX1Q15699 326 aa14.41□□□□□ -0.1
RABGGTA-215ENST00000560207 LDLRAD1Q5T700 205 aa14.41□□□□□ -0.1
RABGGTA-215ENST00000560207 KLRG1Q96E93 195 aa14.41□□□□□ -0.1
RABGGTA-215ENST00000560207 ZNF112Q9UJU3 913 aa14.41□□□□□ -0.1
RABGGTA-215ENST00000560207 ATAD5Q96QE3 1844 aa14.41□□□□□ -0.1
RABGGTA-215ENST00000560207 OTOFQ9HC10 1997 aa14.4□□□□□ -0.1
RABGGTA-215ENST00000560207 DOCK1Q14185 1865 aa14.4□□□□□ -0.1
RABGGTA-215ENST00000560207 DDTLA6NHG4 134 aaPredicted RBP14.4□□□□□ -0.1
RABGGTA-215ENST00000560207 CTNND1O60716 968 aaKnown RBP14.4□□□□□ -0.1
RABGGTA-215ENST00000560207 USP2O75604 605 aaPredicted RBP14.4□□□□□ -0.1
RABGGTA-215ENST00000560207 NMIQ13287 307 aaPredicted RBP14.4□□□□□ -0.1
RABGGTA-215ENST00000560207 PRAMEF18Q5VWM3 479 aa14.4□□□□□ -0.1
RABGGTA-215ENST00000560207 RGMBQ6NW40 437 aa14.4□□□□□ -0.1
RABGGTA-215ENST00000560207 CWC27Q6UX04 472 aaKnown RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms