RNA–Protein interactions for RNA: ENST00000560080.1

RNF111-209, Transcript of ring finger protein 111, humanhuman

TSL 3

Gene RNF111, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-209ENST00000560080 FBLN7Q53RD9 439 aa9.29□□□□□ -0.92
RNF111-209ENST00000560080 CCDC82Q8N4S0 544 aa9.29□□□□□ -0.92
RNF111-209ENST00000560080 CCDC74AQ96AQ1 378 aa9.29□□□□□ -0.92
RNF111-209ENST00000560080 DUSP23Q9BVJ7 150 aa9.29□□□□□ -0.92
RNF111-209ENST00000560080 ADAMTS6Q9UKP5 1117 aa9.29□□□□□ -0.92
RNF111-209ENST00000560080 ZNF862O60290 1169 aa9.28□□□□□ -0.92
RNF111-209ENST00000560080 HCLS1P14317 486 aaPredicted RBP9.28□□□□□ -0.92
RNF111-209ENST00000560080 OXCT1P55809 520 aa9.28□□□□□ -0.92
RNF111-209ENST00000560080 SLC23A3Q6PIS1 610 aa9.28□□□□□ -0.92
RNF111-209ENST00000560080 FAM84AQ96KN4 292 aa9.28□□□□□ -0.92
RNF111-209ENST00000560080 FAM129BQ96TA1 746 aa9.28□□□□□ -0.92
RNF111-209ENST00000560080 FAM53CQ9NYF3 392 aa9.28□□□□□ -0.92
RNF111-209ENST00000560080 SNX11Q9Y5W9 270 aa9.28□□□□□ -0.92
RNF111-209ENST00000560080 CD96P40200 585 aa9.27□□□□□ -0.93
RNF111-209ENST00000560080 TMC1Q8TDI8 760 aa9.27□□□□□ -0.93
RNF111-209ENST00000560080 KCNB2Q92953 911 aa9.27□□□□□ -0.93
RNF111-209ENST00000560080 KRTAP4-9Q9BYQ8 210 aa9.27□□□□□ -0.93
RNF111-209ENST00000560080 BICRAQ9NZM4 1560 aa9.26□□□□□ -0.93
RNF111-209ENST00000560080 EIF1AYO14602 144 aaKnown RBP9.26□□□□□ -0.93
RNF111-209ENST00000560080 LEFTY1O75610 366 aa9.26□□□□□ -0.93
RNF111-209ENST00000560080 FAAP100Q0VG06 881 aa9.26□□□□□ -0.93
RNF111-209ENST00000560080 DTHD1Q6ZMT9 781 aa9.26□□□□□ -0.93
RNF111-209ENST00000560080 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.26□□□□□ -0.93
RNF111-209ENST00000560080 BHLHE22Q8NFJ8 381 aaPredicted RBP9.26□□□□□ -0.93
RNF111-209ENST00000560080 TMEM39AQ9NV64 488 aa9.26□□□□□ -0.93
RNF111-209ENST00000560080 GPN3Q9UHW5 284 aaPredicted RBP9.26□□□□□ -0.93
RNF111-209ENST00000560080 PCDHGC5Q9Y5F6 944 aa9.26□□□□□ -0.93
RNF111-209ENST00000560080 SCRIBQ14160 1630 aa9.25□□□□□ -0.93
RNF111-209ENST00000560080 FLAD1Q8NFF5 587 aa9.25□□□□□ -0.93
RNF111-209ENST00000560080 GTF2IRD1Q9UHL9 959 aa9.25□□□□□ -0.93
RNF111-209ENST00000560080 LRRC10BA6NIK2 292 aa9.24□□□□□ -0.93
RNF111-209ENST00000560080 ITIH2P19823 946 aa9.24□□□□□ -0.93
RNF111-209ENST00000560080 KRTAP19-4Q3LI73 84 aa9.24□□□□□ -0.93
RNF111-209ENST00000560080 ZSWIM9Q86XI8 627 aa9.24□□□□□ -0.93
RNF111-209ENST00000560080 TOP6BLQ8N6T0 577 aa9.24□□□□□ -0.93
RNF111-209ENST00000560080 ASB11Q8WXH4 323 aa9.24□□□□□ -0.93
RNF111-209ENST00000560080 PLAGL2Q9UPG8 496 aa9.24□□□□□ -0.93
RNF111-209ENST00000560080 CARNS1A5YM72 827 aa9.23□□□□□ -0.93
RNF111-209ENST00000560080 XRCC5P13010 732 aaKnown RBP9.23□□□□□ -0.93
RNF111-209ENST00000560080 ARHGAP4P98171 946 aa9.23□□□□□ -0.93
RNF111-209ENST00000560080 GRM2Q14416 872 aa9.23□□□□□ -0.93
RNF111-209ENST00000560080 SPOCD1Q6ZMY3 1216 aa9.23□□□□□ -0.93
RNF111-209ENST00000560080 RNF214Q8ND24 703 aa9.23□□□□□ -0.93
RNF111-209ENST00000560080 NIF3L1Q9GZT8 377 aa9.23□□□□□ -0.93
RNF111-209ENST00000560080 ERVK-24P63145 666 aa9.22□□□□□ -0.93
RNF111-209ENST00000560080 KCNMB1Q16558 191 aa9.22□□□□□ -0.93
RNF111-209ENST00000560080 ISL2Q96A47 359 aa9.22□□□□□ -0.93
RNF111-209ENST00000560080 EMILIN2Q9BXX0 1053 aa9.22□□□□□ -0.93
RNF111-209ENST00000560080 TNKS2Q9H2K2 1166 aa9.22□□□□□ -0.93
RNF111-209ENST00000560080 USTQ9Y2C2 406 aa9.22□□□□□ -0.93
RNF111-209ENST00000560080 U3KQE9 123 aa9.22□□□□□ -0.93
RNF111-209ENST00000560080 SERPINB4P48594 390 aa9.21□□□□□ -0.94
RNF111-209ENST00000560080 FCGRTP55899 365 aa9.21□□□□□ -0.94
RNF111-209ENST00000560080 IKZF1Q13422 519 aa9.21□□□□□ -0.94
RNF111-209ENST00000560080 ECM1Q16610 540 aa9.21□□□□□ -0.94
RNF111-209ENST00000560080 PDZD3Q86UT5 571 aa9.21□□□□□ -0.94
RNF111-209ENST00000560080 NLRP2Q9NX02 1062 aa9.21□□□□□ -0.94
RNF111-209ENST00000560080 NEFMP07197 916 aa9.2□□□□□ -0.94
RNF111-209ENST00000560080 ZC3H12AQ5D1E8 599 aaKnown RBP9.2□□□□□ -0.94
RNF111-209ENST00000560080 SULF2Q8IWU5 870 aa9.2□□□□□ -0.94
RNF111-209ENST00000560080 DMRTB1Q96MA1 342 aa9.2□□□□□ -0.94
RNF111-209ENST00000560080 CSRNP1Q96S65 589 aa9.2□□□□□ -0.94
RNF111-209ENST00000560080 IGF2BP3O00425 579 aaKnown RBP eCLIP9.19□□□□□ -0.94
RNF111-209ENST00000560080 ARNTP27540 789 aa9.19□□□□□ -0.94
RNF111-209ENST00000560080 ZP2Q05996 745 aa9.19□□□□□ -0.94
RNF111-209ENST00000560080 MESP2Q0VG99 397 aa9.19□□□□□ -0.94
RNF111-209ENST00000560080 ACSBG1Q96GR2 724 aa9.19□□□□□ -0.94
RNF111-209ENST00000560080 TOX2Q96NM4 488 aa9.19□□□□□ -0.94
RNF111-209ENST00000560080 GPR182O15218 404 aa9.18□□□□□ -0.94
RNF111-209ENST00000560080 RAP1GAPP47736 663 aa9.18□□□□□ -0.94
RNF111-209ENST00000560080 MLANAQ16655 118 aa9.18□□□□□ -0.94
RNF111-209ENST00000560080 EPS8L3Q8TE67 593 aaKnown RBP9.18□□□□□ -0.94
RNF111-209ENST00000560080 HEXIM2Q96MH2 286 aaKnown RBP9.18□□□□□ -0.94
RNF111-209ENST00000560080 PPP1R16BQ96T49 567 aa9.18□□□□□ -0.94
RNF111-209ENST00000560080 SHROOM4Q9ULL8 1493 aa9.17□□□□□ -0.94
RNF111-209ENST00000560080 AFMP43652 599 aa9.17□□□□□ -0.94
RNF111-209ENST00000560080 MAP1SQ66K74 1059 aaPredicted RBP9.17□□□□□ -0.94
RNF111-209ENST00000560080 PRDM7Q9NQW5 492 aa9.17□□□□□ -0.94
RNF111-209ENST00000560080 PICK1Q9NRD5 415 aa9.17□□□□□ -0.94
RNF111-209ENST00000560080 GNAT3A8MTJ3 354 aa9.16□□□□□ -0.94
RNF111-209ENST00000560080 NME2P22392 152 aa9.16□□□□□ -0.94
RNF111-209ENST00000560080 LCE4AQ5TA78 99 aa9.16□□□□□ -0.94
RNF111-209ENST00000560080 ALKBH8Q96BT7 664 aaKnown RBP9.16□□□□□ -0.94
RNF111-209ENST00000560080 PRDM10Q9NQV6 1147 aa9.16□□□□□ -0.94
RNF111-209ENST00000560080 ZSCAN18Q8TBC5 510 aaPredicted RBP9.15□□□□□ -0.94
RNF111-209ENST00000560080 GPBAR1Q8TDU6 330 aa9.15□□□□□ -0.94
RNF111-209ENST00000560080 CBX8Q9HC52 389 aa9.15□□□□□ -0.94
RNF111-209ENST00000560080 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.15□□□□□ -0.94
RNF111-209ENST00000560080 AKAP2Q9Y2D5 859 aa9.15□□□□□ -0.94
RNF111-209ENST00000560080 ZNF503-AS2A6NEH8 195 aa9.14□□□□□ -0.95
RNF111-209ENST00000560080 CLCN7P51798 805 aa9.14□□□□□ -0.95
RNF111-209ENST00000560080 SPACA3Q8IXA5 215 aa9.14□□□□□ -0.95
RNF111-209ENST00000560080 LMCD1Q9NZU5 365 aa9.14□□□□□ -0.95
RNF111-209ENST00000560080 CTNND2Q9UQB3 1225 aa9.14□□□□□ -0.95
RNF111-209ENST00000560080 SAMM50Q9Y512 469 aa9.14□□□□□ -0.95
RNF111-209ENST00000560080 IGHA2P01877 340 aa9.13□□□□□ -0.95
RNF111-209ENST00000560080 CDC37L1Q7L3B6 337 aa9.13□□□□□ -0.95
RNF111-209ENST00000560080 FAM214BQ7L5A3 538 aa9.13□□□□□ -0.95
RNF111-209ENST00000560080 BCO2Q9BYV7 579 aa9.13□□□□□ -0.95
RNF111-209ENST00000560080 TSPAN15O95858 294 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms