RNA–Protein interactions for RNA: ENST00000560003.1

SEMA4B-214, Transcript of semaphorin 4B, humanhuman

TSL 3

Gene SEMA4B, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-214ENST00000560003 RGS3P49796 1198 aa10.95□□□□□ -0.66
SEMA4B-214ENST00000560003 OTUD7BQ6GQQ9 843 aa10.95□□□□□ -0.66
SEMA4B-214ENST00000560003 MOB2Q70IA6 237 aa10.95□□□□□ -0.66
SEMA4B-214ENST00000560003 RASAL3Q86YV0 1011 aa10.95□□□□□ -0.66
SEMA4B-214ENST00000560003 HAUS7Q99871 368 aa10.95□□□□□ -0.66
SEMA4B-214ENST00000560003 DHX36Q9H2U1 1008 aaKnown RBP10.95□□□□□ -0.66
SEMA4B-214ENST00000560003 RPAP1Q9BWH6 1393 aaPredicted RBP10.94□□□□□ -0.66
SEMA4B-214ENST00000560003 WDHD1O75717 1129 aaPredicted RBP10.94□□□□□ -0.66
SEMA4B-214ENST00000560003 ALDH1A1P00352 501 aa10.94□□□□□ -0.66
SEMA4B-214ENST00000560003 TM4SF4P48230 202 aa10.94□□□□□ -0.66
SEMA4B-214ENST00000560003 SLC9C2Q5TAH2 1124 aa10.94□□□□□ -0.66
SEMA4B-214ENST00000560003 SPRYD7Q5W111 196 aa10.94□□□□□ -0.66
SEMA4B-214ENST00000560003 TEX11Q8IYF3 940 aa10.94□□□□□ -0.66
SEMA4B-214ENST00000560003 MAGEB6Q8N7X4 407 aa10.94□□□□□ -0.66
SEMA4B-214ENST00000560003 CSRNP1Q96S65 589 aa10.94□□□□□ -0.66
SEMA4B-214ENST00000560003 DNAJC2Q99543 621 aaKnown RBP10.94□□□□□ -0.66
SEMA4B-214ENST00000560003 BOLA2Q9H3K6 86 aa10.94□□□□□ -0.66
SEMA4B-214ENST00000560003 PIH1D3Q9NQM4 214 aaKnown RBP10.94□□□□□ -0.66
SEMA4B-214ENST00000560003 PRDM10Q9NQV6 1147 aa10.94□□□□□ -0.66
SEMA4B-214ENST00000560003 PAG1Q9NWQ8 432 aa10.94□□□□□ -0.66
SEMA4B-214ENST00000560003 SAGE1Q9NXZ1 904 aa10.94□□□□□ -0.66
SEMA4B-214ENST00000560003 FAM198AQ9UFP1 575 aa10.94□□□□□ -0.66
SEMA4B-214ENST00000560003 SSUH2Q9Y2M2 353 aa10.94□□□□□ -0.66
SEMA4B-214ENST00000560003 TTC41PQ6P2S7 1318 aa10.93□□□□□ -0.66
SEMA4B-214ENST00000560003 GOLIM4O00461 696 aa10.93□□□□□ -0.66
SEMA4B-214ENST00000560003 TBC1D12O60347 775 aa10.93□□□□□ -0.66
SEMA4B-214ENST00000560003 RHBDL3P58872 404 aa10.93□□□□□ -0.66
SEMA4B-214ENST00000560003 NFIAQ12857 509 aa10.93□□□□□ -0.66
SEMA4B-214ENST00000560003 PICALMQ13492 652 aa10.93□□□□□ -0.66
SEMA4B-214ENST00000560003 ANKRD45Q5TZF3 282 aa10.93□□□□□ -0.66
SEMA4B-214ENST00000560003 FOXP4Q8IVH2 680 aaPredicted RBP10.93□□□□□ -0.66
SEMA4B-214ENST00000560003 WRNIP1Q96S55 665 aa10.93□□□□□ -0.66
SEMA4B-214ENST00000560003 AATFQ9NY61 560 aaKnown RBP eCLIP10.93□□□□□ -0.66
SEMA4B-214ENST00000560003 PI4KBQ9UBF8 816 aa10.93□□□□□ -0.66
SEMA4B-214ENST00000560003 TRPM7Q96QT4 1865 aa10.93□□□□□ -0.66
SEMA4B-214ENST00000560003 PAPPA2Q9BXP8 1791 aa10.93□□□□□ -0.66
SEMA4B-214ENST00000560003 PCNTO95613 3336 aa10.92□□□□□ -0.66
SEMA4B-214ENST00000560003 MAGEB6P1A0A0J9YX57 407 aa10.92□□□□□ -0.66
SEMA4B-214ENST00000560003 SMARCA5O60264 1052 aaPredicted RBP10.92□□□□□ -0.66
SEMA4B-214ENST00000560003 GLRX3O76003 335 aaKnown RBP10.92□□□□□ -0.66
SEMA4B-214ENST00000560003 USP5P45974 858 aa10.92□□□□□ -0.66
SEMA4B-214ENST00000560003 GTF2A2P52657 109 aa10.92□□□□□ -0.66
SEMA4B-214ENST00000560003 MAP3K10Q02779 954 aa10.92□□□□□ -0.66
SEMA4B-214ENST00000560003 MIGA2Q7L4E1 593 aa10.92□□□□□ -0.66
SEMA4B-214ENST00000560003 ERO1BQ86YB8 467 aa10.92□□□□□ -0.66
SEMA4B-214ENST00000560003 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.92□□□□□ -0.66
SEMA4B-214ENST00000560003 ZNF384Q8TF68 577 aa10.92□□□□□ -0.66
SEMA4B-214ENST00000560003 DDRGK1Q96HY6 314 aa10.92□□□□□ -0.66
SEMA4B-214ENST00000560003 TRIM34Q9BYJ4 488 aa10.92□□□□□ -0.66
SEMA4B-214ENST00000560003 PICK1Q9NRD5 415 aa10.92□□□□□ -0.66
SEMA4B-214ENST00000560003 TSHZ2Q9NRE2 1034 aa10.92□□□□□ -0.66
SEMA4B-214ENST00000560003 HERC5Q9UII4 1024 aaKnown RBP10.92□□□□□ -0.66
SEMA4B-214ENST00000560003 ZNF112Q9UJU3 913 aa10.92□□□□□ -0.66
SEMA4B-214ENST00000560003 FOXN1O15353 648 aa10.91□□□□□ -0.66
SEMA4B-214ENST00000560003 HLA-DOAP06340 250 aa10.91□□□□□ -0.66
SEMA4B-214ENST00000560003 ZFYP08048 801 aaPredicted RBP10.91□□□□□ -0.66
SEMA4B-214ENST00000560003 PPATQ06203 517 aa10.91□□□□□ -0.66
SEMA4B-214ENST00000560003 VGLL4Q14135 290 aa10.91□□□□□ -0.66
SEMA4B-214ENST00000560003 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.91□□□□□ -0.66
SEMA4B-214ENST00000560003 TICAM2Q86XR7 235 aa10.91□□□□□ -0.66
SEMA4B-214ENST00000560003 EXOC6Q8TAG9 804 aa10.91□□□□□ -0.66
SEMA4B-214ENST00000560003 SH3RF3Q8TEJ3 882 aaPredicted RBP10.91□□□□□ -0.66
SEMA4B-214ENST00000560003 TGFBRAP1Q8WUH2 860 aa10.91□□□□□ -0.66
SEMA4B-214ENST00000560003 WNK4Q96J92 1243 aa10.91□□□□□ -0.66
SEMA4B-214ENST00000560003 CRNKL1Q9BZJ0 848 aaKnown RBP10.91□□□□□ -0.66
SEMA4B-214ENST00000560003 OSBPL5Q9H0X9 879 aaPredicted RBP10.91□□□□□ -0.66
SEMA4B-214ENST00000560003 ANTXR1Q9H6X2 564 aa10.91□□□□□ -0.66
SEMA4B-214ENST00000560003 ELP3Q9H9T3 547 aa10.91□□□□□ -0.66
SEMA4B-214ENST00000560003 ARAP2Q8WZ64 1704 aa10.9□□□□□ -0.66
SEMA4B-214ENST00000560003 CTNND1O60716 968 aaKnown RBP10.9□□□□□ -0.66
SEMA4B-214ENST00000560003 PDE6AP16499 860 aa10.9□□□□□ -0.66
SEMA4B-214ENST00000560003 UBE3CQ15386 1083 aa10.9□□□□□ -0.66
SEMA4B-214ENST00000560003 TTC6Q86TZ1 520 aa10.9□□□□□ -0.66
SEMA4B-214ENST00000560003 ZFPM1Q8IX07 1006 aa10.9□□□□□ -0.66
SEMA4B-214ENST00000560003 AMOTL1Q8IY63 956 aa10.9□□□□□ -0.66
SEMA4B-214ENST00000560003 CRACR2BQ8N4Y2 399 aaPredicted RBP10.9□□□□□ -0.66
SEMA4B-214ENST00000560003 OPTNQ96CV9 577 aa10.9□□□□□ -0.66
SEMA4B-214ENST00000560003 CLMNQ96JQ2 1002 aa10.9□□□□□ -0.66
SEMA4B-214ENST00000560003 TBC1D2Q9BYX2 928 aa10.9□□□□□ -0.66
SEMA4B-214ENST00000560003 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.9□□□□□ -0.66
SEMA4B-214ENST00000560003 RNF186Q9NXI6 227 aa10.9□□□□□ -0.66
SEMA4B-214ENST00000560003 ZNF646O15015 1829 aaPredicted RBP10.9□□□□□ -0.66
SEMA4B-214ENST00000560003 POLR2AP24928 1970 aaKnown RBP10.9□□□□□ -0.66
SEMA4B-214ENST00000560003 ZNF532Q9HCE3 1301 aa10.89□□□□□ -0.67
SEMA4B-214ENST00000560003 SPDYE5A6NIY4 337 aa10.89□□□□□ -0.67
SEMA4B-214ENST00000560003 TRPA1O75762 1119 aa10.89□□□□□ -0.67
SEMA4B-214ENST00000560003 CETPP11597 493 aa10.89□□□□□ -0.67
SEMA4B-214ENST00000560003 MX1P20591 662 aa10.89□□□□□ -0.67
SEMA4B-214ENST00000560003 LBX1P52954 281 aa10.89□□□□□ -0.67
SEMA4B-214ENST00000560003 MKRN3Q13064 507 aaKnown RBP10.89□□□□□ -0.67
SEMA4B-214ENST00000560003 PPIL2Q13356 520 aa10.89□□□□□ -0.67
SEMA4B-214ENST00000560003 SNAPC2Q13487 334 aa10.89□□□□□ -0.67
SEMA4B-214ENST00000560003 NOL9Q5SY16 702 aaKnown RBP10.89□□□□□ -0.67
SEMA4B-214ENST00000560003 CDAN1Q8IWY9 1227 aa10.89□□□□□ -0.67
SEMA4B-214ENST00000560003 MIGA1Q8NAN2 632 aa10.89□□□□□ -0.67
SEMA4B-214ENST00000560003 ZKSCAN4Q969J2 545 aaPredicted RBP10.89□□□□□ -0.67
SEMA4B-214ENST00000560003 DDX4Q9NQI0 724 aaKnown RBP10.89□□□□□ -0.67
SEMA4B-214ENST00000560003 GINM1Q9NU53 330 aa10.89□□□□□ -0.67
SEMA4B-214ENST00000560003 FZD1Q9UP38 647 aa10.89□□□□□ -0.67
SEMA4B-214ENST00000560003 NDUFB9Q9Y6M9 179 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms