RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 ZC3H4Q9UPT8 1303 aaKnown RBP11.27□□□□□ -0.61
HERC1-206ENST00000559996 SMIM22K7EJ46 135 aa11.26□□□□□ -0.61
HERC1-206ENST00000559996 WNT10BO00744 389 aa11.26□□□□□ -0.61
HERC1-206ENST00000559996 WDHD1O75717 1129 aaPredicted RBP11.26□□□□□ -0.61
HERC1-206ENST00000559996 FGAP02671 866 aa11.26□□□□□ -0.61
HERC1-206ENST00000559996 NECTIN1Q15223 517 aa11.26□□□□□ -0.61
HERC1-206ENST00000559996 ALX1Q15699 326 aa11.26□□□□□ -0.61
HERC1-206ENST00000559996 NBPF9Q3BBW0 867 aa11.26□□□□□ -0.61
HERC1-206ENST00000559996 SAMD7Q7Z3H4 446 aa11.26□□□□□ -0.61
HERC1-206ENST00000559996 MICALL2Q8IY33 904 aa11.26□□□□□ -0.61
HERC1-206ENST00000559996 KCNB2Q92953 911 aa11.26□□□□□ -0.61
HERC1-206ENST00000559996 DSCC1Q9BVC3 393 aa11.26□□□□□ -0.61
HERC1-206ENST00000559996 TMEM106CQ9BVX2 250 aa11.26□□□□□ -0.61
HERC1-206ENST00000559996 MYOZ2Q9NPC6 264 aa11.26□□□□□ -0.61
HERC1-206ENST00000559996 DDX4Q9NQI0 724 aaKnown RBP11.26□□□□□ -0.61
HERC1-206ENST00000559996 TACC3Q9Y6A5 838 aa11.26□□□□□ -0.61
HERC1-206ENST00000559996 CDK5RAP2Q96SN8 1893 aa11.25□□□□□ -0.61
HERC1-206ENST00000559996 EPB41L2O43491 1005 aaKnown RBP11.25□□□□□ -0.61
HERC1-206ENST00000559996 ZFPM1Q8IX07 1006 aa11.25□□□□□ -0.61
HERC1-206ENST00000559996 SLF2Q8IX21 1173 aa11.25□□□□□ -0.61
HERC1-206ENST00000559996 IFNL3Q8IZI9 196 aa11.25□□□□□ -0.61
HERC1-206ENST00000559996 TRPM4Q8TD43 1214 aa11.25□□□□□ -0.61
HERC1-206ENST00000559996 SDR42E1Q8WUS8 393 aa11.25□□□□□ -0.61
HERC1-206ENST00000559996 AIDAQ96BJ3 306 aa11.25□□□□□ -0.61
HERC1-206ENST00000559996 IDI2Q9BXS1 227 aa11.25□□□□□ -0.61
HERC1-206ENST00000559996 TDRD3Q9H7E2 651 aaKnown RBP11.25□□□□□ -0.61
HERC1-206ENST00000559996 USP40Q9NVE5 1235 aa11.25□□□□□ -0.61
HERC1-206ENST00000559996 PGAP2Q9UHJ9 254 aa11.25□□□□□ -0.61
HERC1-206ENST00000559996 TAF6LQ9Y6J9 622 aa11.25□□□□□ -0.61
HERC1-206ENST00000559996 ASTN2O75129 1339 aaPredicted RBP11.25□□□□□ -0.61
HERC1-206ENST00000559996 BAG3O95817 575 aa11.24□□□□□ -0.61
HERC1-206ENST00000559996 MFAP1P55081 439 aaKnown RBP11.24□□□□□ -0.61
HERC1-206ENST00000559996 NFIAQ12857 509 aa11.24□□□□□ -0.61
HERC1-206ENST00000559996 COL9A3Q14050 684 aaPredicted RBP11.24□□□□□ -0.61
HERC1-206ENST00000559996 DPY19L2Q6NUT2 758 aa11.24□□□□□ -0.61
HERC1-206ENST00000559996 CASC1Q6TDU7 716 aa11.24□□□□□ -0.61
HERC1-206ENST00000559996 IL17RAQ96F46 866 aa11.24□□□□□ -0.61
HERC1-206ENST00000559996 KIF2CQ99661 725 aa11.24□□□□□ -0.61
HERC1-206ENST00000559996 DCP1AQ9NPI6 582 aaPredicted RBP11.24□□□□□ -0.61
HERC1-206ENST00000559996 ZNF70Q9UC06 446 aaPredicted RBP11.24□□□□□ -0.61
HERC1-206ENST00000559996 FAM198AQ9UFP1 575 aa11.24□□□□□ -0.61
HERC1-206ENST00000559996 HDAC9Q9UKV0 1011 aa11.24□□□□□ -0.61
HERC1-206ENST00000559996 SLC4A4Q9Y6R1 1079 aa11.24□□□□□ -0.61
HERC1-206ENST00000559996 RPAP1Q9BWH6 1393 aaPredicted RBP11.24□□□□□ -0.61
HERC1-206ENST00000559996 PYGBP11216 843 aa11.23□□□□□ -0.61
HERC1-206ENST00000559996 GNAT2P19087 354 aa11.23□□□□□ -0.61
HERC1-206ENST00000559996 HSPA4P34932 840 aa11.23□□□□□ -0.61
HERC1-206ENST00000559996 CACNB3P54284 484 aa11.23□□□□□ -0.61
HERC1-206ENST00000559996 DLGAP5Q15398 846 aa11.23□□□□□ -0.61
HERC1-206ENST00000559996 TBC1D10BQ4KMP7 808 aaPredicted RBP11.23□□□□□ -0.61
HERC1-206ENST00000559996 RBM26Q5T8P6 1007 aaKnown RBP11.23□□□□□ -0.61
HERC1-206ENST00000559996 IER5LQ5T953 404 aa11.23□□□□□ -0.61
HERC1-206ENST00000559996 GIMAP6Q6P9H5 292 aa11.23□□□□□ -0.61
HERC1-206ENST00000559996 CTR9Q6PD62 1173 aa11.23□□□□□ -0.61
HERC1-206ENST00000559996 SH3BP5LQ7L8J4 393 aa11.23□□□□□ -0.61
HERC1-206ENST00000559996 OGFOD1Q8N543 542 aa11.23□□□□□ -0.61
HERC1-206ENST00000559996 NKX2-3Q8TAU0 364 aa11.23□□□□□ -0.61
HERC1-206ENST00000559996 TGFBRAP1Q8WUH2 860 aa11.23□□□□□ -0.61
HERC1-206ENST00000559996 NBPF3Q9H094 633 aa11.23□□□□□ -0.61
HERC1-206ENST00000559996 ANO2Q9NQ90 1003 aa11.23□□□□□ -0.61
HERC1-206ENST00000559996 PALD1Q9ULE6 856 aa11.23□□□□□ -0.61
HERC1-206ENST00000559996 RBM8AQ9Y5S9 174 aaKnown RBP11.23□□□□□ -0.61
HERC1-206ENST00000559996 WDR90Q96KV7 1748 aa11.23□□□□□ -0.61
HERC1-206ENST00000559996 FOCADQ5VW36 1801 aa11.23□□□□□ -0.61
HERC1-206ENST00000559996 ECM29Q5VYK3 1845 aa11.23□□□□□ -0.61
HERC1-206ENST00000559996 H7C1D1 291 aa11.22□□□□□ -0.61
HERC1-206ENST00000559996 REC8O95072 547 aa11.22□□□□□ -0.61
HERC1-206ENST00000559996 ZMYM6O95789 1325 aa11.22□□□□□ -0.61
HERC1-206ENST00000559996 CYP21A2P08686 494 aa11.22□□□□□ -0.61
HERC1-206ENST00000559996 RBM25P49756 843 aaKnown RBP11.22□□□□□ -0.61
HERC1-206ENST00000559996 RBM5P52756 815 aaKnown RBP eCLIP11.22□□□□□ -0.61
HERC1-206ENST00000559996 CNTNAP1P78357 1384 aa11.22□□□□□ -0.61
HERC1-206ENST00000559996 TSGA10IPQ3SY00 556 aa11.22□□□□□ -0.61
HERC1-206ENST00000559996 SBK1Q52WX2 424 aa11.22□□□□□ -0.61
HERC1-206ENST00000559996 TEX11Q8IYF3 940 aa11.22□□□□□ -0.61
HERC1-206ENST00000559996 CRNKL1Q9BZJ0 848 aaKnown RBP11.22□□□□□ -0.61
HERC1-206ENST00000559996 ATP8A2Q9NTI2 1148 aa11.22□□□□□ -0.61
HERC1-206ENST00000559996 FLT1P17948 1338 aa11.21□□□□□ -0.61
HERC1-206ENST00000559996 CYP2D7A0A087X1C5 515 aa11.21□□□□□ -0.61
HERC1-206ENST00000559996 CLRN2A0PK11 232 aa11.21□□□□□ -0.61
HERC1-206ENST00000559996 USP17L12C9JPN9 530 aa11.21□□□□□ -0.61
HERC1-206ENST00000559996 USP17L21D6R901 530 aa11.21□□□□□ -0.61
HERC1-206ENST00000559996 SLC27A2O14975 620 aa11.21□□□□□ -0.61
HERC1-206ENST00000559996 SLURP2P0DP57 97 aa11.21□□□□□ -0.61
HERC1-206ENST00000559996 PLCG2P16885 1265 aa11.21□□□□□ -0.61
HERC1-206ENST00000559996 KIF4BQ2VIQ3 1234 aa11.21□□□□□ -0.61
HERC1-206ENST00000559996 LCE2DQ5TA82 110 aaPredicted RBP11.21□□□□□ -0.61
HERC1-206ENST00000559996 CREB3L3Q68CJ9 461 aa11.21□□□□□ -0.61
HERC1-206ENST00000559996 CERS3Q8IU89 383 aa11.21□□□□□ -0.61
HERC1-206ENST00000559996 MAPKAPK5Q8IW41 473 aa11.21□□□□□ -0.61
HERC1-206ENST00000559996 TBC1D32Q96NH3 1257 aa11.21□□□□□ -0.61
HERC1-206ENST00000559996 INCENPQ9NQS7 918 aa11.21□□□□□ -0.61
HERC1-206ENST00000559996 ADARB2Q9NS39 739 aaKnown RBP11.21□□□□□ -0.61
HERC1-206ENST00000559996 SCAF8Q9UPN6 1271 aaKnown RBP11.21□□□□□ -0.61
HERC1-206ENST00000559996 BAZ2AQ9UIF9 1905 aaKnown RBP11.21□□□□□ -0.62
HERC1-206ENST00000559996 DDX60LQ5H9U9 1706 aaKnown RBP11.21□□□□□ -0.62
HERC1-206ENST00000559996 POLR2AP24928 1970 aaKnown RBP11.2□□□□□ -0.62
HERC1-206ENST00000559996 DDTLA6NHG4 134 aaPredicted RBP11.2□□□□□ -0.62
HERC1-206ENST00000559996 FGRP09769 529 aa11.2□□□□□ -0.62
HERC1-206ENST00000559996 CYP2D6P10635 497 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms