RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 GSG1L2A8MUP6 293 aa17.15■□□□□ 0.34
SMAD6-204ENST00000559931 ENTPD3O75355 529 aa17.15■□□□□ 0.34
SMAD6-204ENST00000559931 TDO2P48775 406 aa17.15■□□□□ 0.34
SMAD6-204ENST00000559931 C1QTNF8P60827 252 aa17.15■□□□□ 0.34
SMAD6-204ENST00000559931 RASA3Q14644 834 aa17.15■□□□□ 0.34
SMAD6-204ENST00000559931 MAP1SQ66K74 1059 aaPredicted RBP17.15■□□□□ 0.34
SMAD6-204ENST00000559931 USP48Q86UV5 1035 aa17.15■□□□□ 0.34
SMAD6-204ENST00000559931 AMOTL1Q8IY63 956 aa17.15■□□□□ 0.34
SMAD6-204ENST00000559931 DEFB129Q9H1M3 183 aa17.15■□□□□ 0.34
SMAD6-204ENST00000559931 ANO2Q9NQ90 1003 aa17.15■□□□□ 0.34
SMAD6-204ENST00000559931 DDX4Q9NQI0 724 aaKnown RBP17.15■□□□□ 0.34
SMAD6-204ENST00000559931 MCM9Q9NXL9 1143 aa17.15■□□□□ 0.34
SMAD6-204ENST00000559931 FAM198AQ9UFP1 575 aa17.15■□□□□ 0.34
SMAD6-204ENST00000559931 PGAP2Q9UHJ9 254 aa17.15■□□□□ 0.34
SMAD6-204ENST00000559931 CDK5RAP2Q96SN8 1893 aa17.15■□□□□ 0.34
SMAD6-204ENST00000559931 PITPNM2Q9BZ72 1349 aa17.15■□□□□ 0.34
SMAD6-204ENST00000559931 POLR3DP05423 398 aaPredicted RBP17.14■□□□□ 0.33
SMAD6-204ENST00000559931 HSPD1P10809 573 aaKnown RBP17.14■□□□□ 0.33
SMAD6-204ENST00000559931 VPS53Q5VIR6 699 aa17.14■□□□□ 0.33
SMAD6-204ENST00000559931 CDC37L1Q7L3B6 337 aa17.14■□□□□ 0.33
SMAD6-204ENST00000559931 FAM83AQ86UY5 434 aa17.14■□□□□ 0.33
SMAD6-204ENST00000559931 ZFPM1Q8IX07 1006 aa17.14■□□□□ 0.33
SMAD6-204ENST00000559931 IFNL3Q8IZI9 196 aa17.14■□□□□ 0.33
SMAD6-204ENST00000559931 FAM151AQ8WW52 585 aa17.14■□□□□ 0.33
SMAD6-204ENST00000559931 NAPBQ9H115 298 aa17.14■□□□□ 0.33
SMAD6-204ENST00000559931 IL25Q9H293 177 aa17.14■□□□□ 0.33
SMAD6-204ENST00000559931 DCP1AQ9NPI6 582 aaPredicted RBP17.14■□□□□ 0.33
SMAD6-204ENST00000559931 FLT1P17948 1338 aa17.14■□□□□ 0.33
SMAD6-204ENST00000559931 MYH1P12882 1939 aa17.13■□□□□ 0.33
SMAD6-204ENST00000559931 NPM3O75607 178 aaKnown RBP17.13■□□□□ 0.33
SMAD6-204ENST00000559931 SLC4A8Q2Y0W8 1093 aa17.13■□□□□ 0.33
SMAD6-204ENST00000559931 GLIS2Q9BZE0 524 aaPredicted RBP17.13■□□□□ 0.33
SMAD6-204ENST00000559931 TMEM39BQ9GZU3 492 aa17.13■□□□□ 0.33
SMAD6-204ENST00000559931 OSBPL5Q9H0X9 879 aaPredicted RBP17.13■□□□□ 0.33
SMAD6-204ENST00000559931 PALD1Q9ULE6 856 aa17.13■□□□□ 0.33
SMAD6-204ENST00000559931 BAZ2AQ9UIF9 1905 aaKnown RBP17.13■□□□□ 0.33
SMAD6-204ENST00000559931 RPAP1Q9BWH6 1393 aaPredicted RBP17.13■□□□□ 0.33
SMAD6-204ENST00000559931 MINDY4BA8MYZ0 360 aa17.12■□□□□ 0.33
SMAD6-204ENST00000559931 ADM5C9JUS6 153 aa17.12■□□□□ 0.33
SMAD6-204ENST00000559931 EIF5BO60841 1220 aaKnown RBP17.12■□□□□ 0.33
SMAD6-204ENST00000559931 REC8O95072 547 aa17.12■□□□□ 0.33
SMAD6-204ENST00000559931 FSTL1Q12841 308 aa17.12■□□□□ 0.33
SMAD6-204ENST00000559931 PRAMEF18Q5VWM3 479 aa17.12■□□□□ 0.33
SMAD6-204ENST00000559931 GIMAP6Q6P9H5 292 aa17.12■□□□□ 0.33
SMAD6-204ENST00000559931 CNTNAP1P78357 1384 aa17.12■□□□□ 0.33
SMAD6-204ENST00000559931 FOCADQ5VW36 1801 aa17.12■□□□□ 0.33
SMAD6-204ENST00000559931 USP17L12C9JPN9 530 aa17.11■□□□□ 0.33
SMAD6-204ENST00000559931 USP17L21D6R901 530 aa17.11■□□□□ 0.33
SMAD6-204ENST00000559931 HLA-DOAP06340 250 aa17.11■□□□□ 0.33
SMAD6-204ENST00000559931 PTH1RQ03431 593 aa17.11■□□□□ 0.33
SMAD6-204ENST00000559931 TTC6Q86TZ1 520 aa17.11■□□□□ 0.33
SMAD6-204ENST00000559931 DSCC1Q9BVC3 393 aa17.11■□□□□ 0.33
SMAD6-204ENST00000559931 TRIM34Q9BYJ4 488 aa17.11■□□□□ 0.33
SMAD6-204ENST00000559931 DHX36Q9H2U1 1008 aaKnown RBP17.11■□□□□ 0.33
SMAD6-204ENST00000559931 CTNNA3Q9UI47 895 aa17.11■□□□□ 0.33
SMAD6-204ENST00000559931 PPP2R3BQ9Y5P8 575 aa17.11■□□□□ 0.33
SMAD6-204ENST00000559931 NAV1Q8NEY1 1877 aa17.1■□□□□ 0.33
SMAD6-204ENST00000559931 FGAP02671 866 aa17.1■□□□□ 0.33
SMAD6-204ENST00000559931 ALX1Q15699 326 aa17.1■□□□□ 0.33
SMAD6-204ENST00000559931 SUPT20HL1Q3ZLR7 823 aa17.1■□□□□ 0.33
SMAD6-204ENST00000559931 CTR9Q6PD62 1173 aa17.1■□□□□ 0.33
SMAD6-204ENST00000559931 DLK2Q6UY11 383 aa17.1■□□□□ 0.33
SMAD6-204ENST00000559931 CSRNP1Q96S65 589 aa17.1■□□□□ 0.33
SMAD6-204ENST00000559931 EPB41L4AQ9HCS5 686 aaPredicted RBP17.1■□□□□ 0.33
SMAD6-204ENST00000559931 U3KPZ7 1027 aaPredicted RBP17.1■□□□□ 0.33
SMAD6-204ENST00000559931 CYP2D7A0A087X1C5 515 aa17.09■□□□□ 0.33
SMAD6-204ENST00000559931 DDTLA6NHG4 134 aaPredicted RBP17.09■□□□□ 0.33
SMAD6-204ENST00000559931 CYP2D6P10635 497 aa17.09■□□□□ 0.33
SMAD6-204ENST00000559931 NF2P35240 595 aa17.09■□□□□ 0.33
SMAD6-204ENST00000559931 C8orf34Q49A92 452 aa17.09■□□□□ 0.33
SMAD6-204ENST00000559931 NBPF12Q5TAG4 269 aaPredicted RBP17.09■□□□□ 0.33
SMAD6-204ENST00000559931 STK11IPQ8N1F8 1099 aa17.09■□□□□ 0.33
SMAD6-204ENST00000559931 CRACR2BQ8N4Y2 399 aaPredicted RBP17.09■□□□□ 0.33
SMAD6-204ENST00000559931 HOOK2Q96ED9 719 aa17.09■□□□□ 0.33
SMAD6-204ENST00000559931 LSG1Q9H089 658 aaKnown RBP17.09■□□□□ 0.33
SMAD6-204ENST00000559931 PI4KBQ9UBF8 816 aa17.09■□□□□ 0.33
SMAD6-204ENST00000559931 ARPP21Q9UBL0 812 aaPredicted RBP17.09■□□□□ 0.33
SMAD6-204ENST00000559931 MKRN1Q9UHC7 482 aaKnown RBP17.09■□□□□ 0.33
SMAD6-204ENST00000559931 TRPM7Q96QT4 1865 aa17.08■□□□□ 0.33
SMAD6-204ENST00000559931 TRAF5O00463 557 aa17.08■□□□□ 0.32
SMAD6-204ENST00000559931 FOXP2O15409 715 aa17.08■□□□□ 0.32
SMAD6-204ENST00000559931 FMR1Q06787 632 aaKnown RBP eCLIP17.08■□□□□ 0.32
SMAD6-204ENST00000559931 SH3BP5LQ7L8J4 393 aa17.08■□□□□ 0.32
SMAD6-204ENST00000559931 MAP4K1Q92918 833 aa17.08■□□□□ 0.32
SMAD6-204ENST00000559931 CDCA5Q96FF9 252 aa17.08■□□□□ 0.32
SMAD6-204ENST00000559931 ZNF408Q9H9D4 720 aa17.08■□□□□ 0.32
SMAD6-204ENST00000559931 ZNF213O14771 459 aa17.07■□□□□ 0.32
SMAD6-204ENST00000559931 ITGBL1O95965 494 aaPredicted RBP17.07■□□□□ 0.32
SMAD6-204ENST00000559931 SLC3A2P08195 630 aaKnown RBP17.07■□□□□ 0.32
SMAD6-204ENST00000559931 PLCD1P51178 756 aa17.07■□□□□ 0.32
SMAD6-204ENST00000559931 HAND2P61296 217 aa17.07■□□□□ 0.32
SMAD6-204ENST00000559931 TTLL12Q14166 644 aaPredicted RBP17.07■□□□□ 0.32
SMAD6-204ENST00000559931 IMMTQ16891 758 aaKnown RBP17.07■□□□□ 0.32
SMAD6-204ENST00000559931 SBK1Q52WX2 424 aa17.07■□□□□ 0.32
SMAD6-204ENST00000559931 C12orf60Q5U649 245 aa17.07■□□□□ 0.32
SMAD6-204ENST00000559931 MIGA2Q7L4E1 593 aa17.07■□□□□ 0.32
SMAD6-204ENST00000559931 FOXP4Q8IVH2 680 aaPredicted RBP17.07■□□□□ 0.32
SMAD6-204ENST00000559931 CDAN1Q8IWY9 1227 aa17.07■□□□□ 0.32
SMAD6-204ENST00000559931 TEPSINQ96N21 525 aa17.07■□□□□ 0.32
SMAD6-204ENST00000559931 RBM8AQ9Y5S9 174 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms