RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 EPS15P42566 896 aa12.42□□□□□ -0.42
TPM1-221ENST00000559831 RBM25P49756 843 aaKnown RBP12.42□□□□□ -0.42
TPM1-221ENST00000559831 NBPF9Q3BBW0 867 aa12.42□□□□□ -0.42
TPM1-221ENST00000559831 GIMAP6Q6P9H5 292 aa12.42□□□□□ -0.42
TPM1-221ENST00000559831 AMOTL1Q8IY63 956 aa12.42□□□□□ -0.42
TPM1-221ENST00000559831 STK11IPQ8N1F8 1099 aa12.42□□□□□ -0.42
TPM1-221ENST00000559831 VEZTQ9HBM0 779 aa12.42□□□□□ -0.42
TPM1-221ENST00000559831 MCM9Q9NXL9 1143 aa12.42□□□□□ -0.42
TPM1-221ENST00000559831 ZNF70Q9UC06 446 aaPredicted RBP12.42□□□□□ -0.42
TPM1-221ENST00000559831 SNX14Q9Y5W7 946 aa12.42□□□□□ -0.42
TPM1-221ENST00000559831 CYP2D7A0A087X1C5 515 aa12.41□□□□□ -0.42
TPM1-221ENST00000559831 GLTPD2A6NH11 291 aa12.41□□□□□ -0.42
TPM1-221ENST00000559831 TCP10L2B9ZVM9 353 aa12.41□□□□□ -0.42
TPM1-221ENST00000559831 USP17L12C9JPN9 530 aa12.41□□□□□ -0.42
TPM1-221ENST00000559831 USP17L21D6R901 530 aa12.41□□□□□ -0.42
TPM1-221ENST00000559831 WNT10BO00744 389 aa12.41□□□□□ -0.42
TPM1-221ENST00000559831 ZNF213O14771 459 aa12.41□□□□□ -0.42
TPM1-221ENST00000559831 POLR3DP05423 398 aaPredicted RBP12.41□□□□□ -0.42
TPM1-221ENST00000559831 CYP21A2P08686 494 aa12.41□□□□□ -0.42
TPM1-221ENST00000559831 CYP2D6P10635 497 aa12.41□□□□□ -0.42
TPM1-221ENST00000559831 ZKSCAN1P17029 563 aaPredicted RBP12.41□□□□□ -0.42
TPM1-221ENST00000559831 CTDSPL2Q05D32 466 aa12.41□□□□□ -0.42
TPM1-221ENST00000559831 TCP10Q12799 353 aa12.41□□□□□ -0.42
TPM1-221ENST00000559831 NFIAQ12857 509 aa12.41□□□□□ -0.42
TPM1-221ENST00000559831 SPDYE2Q495Y8 402 aa12.41□□□□□ -0.42
TPM1-221ENST00000559831 RASEFQ8IZ41 740 aa12.41□□□□□ -0.42
TPM1-221ENST00000559831 TRPM4Q8TD43 1214 aa12.41□□□□□ -0.42
TPM1-221ENST00000559831 ZBED3Q96IU2 234 aaPredicted RBP12.41□□□□□ -0.42
TPM1-221ENST00000559831 DDX4Q9NQI0 724 aaKnown RBP12.41□□□□□ -0.42
TPM1-221ENST00000559831 ARPP21Q9UBL0 812 aaPredicted RBP12.41□□□□□ -0.42
TPM1-221ENST00000559831 TAF6LQ9Y6J9 622 aa12.41□□□□□ -0.42
TPM1-221ENST00000559831 WDR90Q96KV7 1748 aa12.4□□□□□ -0.42
TPM1-221ENST00000559831 PPARAQ07869 468 aa12.4□□□□□ -0.42
TPM1-221ENST00000559831 CTR9Q6PD62 1173 aa12.4□□□□□ -0.42
TPM1-221ENST00000559831 OSBPL5Q9H0X9 879 aaPredicted RBP12.4□□□□□ -0.42
TPM1-221ENST00000559831 FAM198AQ9UFP1 575 aa12.4□□□□□ -0.42
TPM1-221ENST00000559831 SIPA1L1O43166 1804 aa12.39□□□□□ -0.43
TPM1-221ENST00000559831 ANAPC15P60006 121 aa12.39□□□□□ -0.43
TPM1-221ENST00000559831 EVX2Q03828 476 aa12.39□□□□□ -0.43
TPM1-221ENST00000559831 TBC1D10CQ8IV04 446 aa12.39□□□□□ -0.43
TPM1-221ENST00000559831 ZSCAN29Q8IWY8 852 aaPredicted RBP12.39□□□□□ -0.43
TPM1-221ENST00000559831 ZFPM1Q8IX07 1006 aa12.39□□□□□ -0.43
TPM1-221ENST00000559831 KCNB2Q92953 911 aa12.39□□□□□ -0.43
TPM1-221ENST00000559831 L3MBTL3Q96JM7 780 aaPredicted RBP12.39□□□□□ -0.43
TPM1-221ENST00000559831 JAKMIP1Q96N16 626 aaKnown RBP12.39□□□□□ -0.43
TPM1-221ENST00000559831 IDI2Q9BXS1 227 aa12.39□□□□□ -0.43
TPM1-221ENST00000559831 ADARB2Q9NS39 739 aaKnown RBP12.39□□□□□ -0.43
TPM1-221ENST00000559831 MKRN1Q9UHC7 482 aaKnown RBP12.39□□□□□ -0.43
TPM1-221ENST00000559831 HACL1Q9UJ83 578 aa12.39□□□□□ -0.43
TPM1-221ENST00000559831 ASTN2O75129 1339 aaPredicted RBP12.38□□□□□ -0.43
TPM1-221ENST00000559831 E7EWF7 191 aa12.38□□□□□ -0.43
TPM1-221ENST00000559831 SMIM22K7EJ46 135 aa12.38□□□□□ -0.43
TPM1-221ENST00000559831 SLC3A2P08195 630 aaKnown RBP12.38□□□□□ -0.43
TPM1-221ENST00000559831 KRT32Q14532 448 aa12.38□□□□□ -0.43
TPM1-221ENST00000559831 ADCK5Q3MIX3 580 aa12.38□□□□□ -0.43
TPM1-221ENST00000559831 SBK1Q52WX2 424 aa12.38□□□□□ -0.43
TPM1-221ENST00000559831 C12orf60Q5U649 245 aa12.38□□□□□ -0.43
TPM1-221ENST00000559831 STOX1Q6ZVD7 989 aa12.38□□□□□ -0.43
TPM1-221ENST00000559831 NBPF3Q9H094 633 aa12.38□□□□□ -0.43
TPM1-221ENST00000559831 TOMM22Q9NS69 142 aa12.38□□□□□ -0.43
TPM1-221ENST00000559831 SCAF8Q9UPN6 1271 aaKnown RBP12.38□□□□□ -0.43
TPM1-221ENST00000559831 ENTPD3O75355 529 aa12.37□□□□□ -0.43
TPM1-221ENST00000559831 HLA-DOAP06340 250 aa12.37□□□□□ -0.43
TPM1-221ENST00000559831 CASTP20810 708 aaKnown RBP12.37□□□□□ -0.43
TPM1-221ENST00000559831 PSMA5P28066 241 aa12.37□□□□□ -0.43
TPM1-221ENST00000559831 EPHX2P34913 555 aa12.37□□□□□ -0.43
TPM1-221ENST00000559831 TNNI2P48788 182 aa12.37□□□□□ -0.43
TPM1-221ENST00000559831 PLCD1P51178 756 aa12.37□□□□□ -0.43
TPM1-221ENST00000559831 HIRAP54198 1017 aaPredicted RBP12.37□□□□□ -0.43
TPM1-221ENST00000559831 RRP12Q5JTH9 1297 aaKnown RBP12.37□□□□□ -0.43
TPM1-221ENST00000559831 AKNAD1Q5T1N1 836 aa12.37□□□□□ -0.43
TPM1-221ENST00000559831 MFSD6Q6ZSS7 791 aa12.37□□□□□ -0.43
TPM1-221ENST00000559831 DYNLL2Q96FJ2 89 aa12.37□□□□□ -0.43
TPM1-221ENST00000559831 KIF2CQ99661 725 aa12.37□□□□□ -0.43
TPM1-221ENST00000559831 INCENPQ9NQS7 918 aa12.37□□□□□ -0.43
TPM1-221ENST00000559831 ANAPC4Q9UJX5 808 aa12.37□□□□□ -0.43
TPM1-221ENST00000559831 RBM19Q9Y4C8 960 aaKnown RBP12.37□□□□□ -0.43
TPM1-221ENST00000559831 CNTNAP1P78357 1384 aa12.37□□□□□ -0.43
TPM1-221ENST00000559831 NEDD4P46934 1319 aa12.37□□□□□ -0.43
TPM1-221ENST00000559831 IQCA1LA6NCM1 817 aa12.36□□□□□ -0.43
TPM1-221ENST00000559831 NPM3O75607 178 aaKnown RBP12.36□□□□□ -0.43
TPM1-221ENST00000559831 CPA1P15085 419 aa12.36□□□□□ -0.43
TPM1-221ENST00000559831 TRDNQ13061 729 aa12.36□□□□□ -0.43
TPM1-221ENST00000559831 TNFAIP1Q13829 316 aa12.36□□□□□ -0.43
TPM1-221ENST00000559831 RABEP1Q15276 862 aa12.36□□□□□ -0.43
TPM1-221ENST00000559831 TSGA10IPQ3SY00 556 aa12.36□□□□□ -0.43
TPM1-221ENST00000559831 EAPPQ56P03 285 aaPredicted RBP12.36□□□□□ -0.43
TPM1-221ENST00000559831 ANGEL2Q5VTE6 544 aaKnown RBP12.36□□□□□ -0.43
TPM1-221ENST00000559831 FKBP1CQ5VVH2 108 aa12.36□□□□□ -0.43
TPM1-221ENST00000559831 RALYLQ86SE5 291 aaKnown RBP12.36□□□□□ -0.43
TPM1-221ENST00000559831 TTC6Q86TZ1 520 aa12.36□□□□□ -0.43
TPM1-221ENST00000559831 STAG1Q8WVM7 1258 aa12.36□□□□□ -0.43
TPM1-221ENST00000559831 FAM151AQ8WW52 585 aa12.36□□□□□ -0.43
TPM1-221ENST00000559831 NEK1Q96PY6 1258 aa12.36□□□□□ -0.43
TPM1-221ENST00000559831 TRIM34Q9BYJ4 488 aa12.36□□□□□ -0.43
TPM1-221ENST00000559831 UPF3BQ9BZI7 483 aaKnown RBP12.36□□□□□ -0.43
TPM1-221ENST00000559831 RNF41Q9H4P4 317 aaPredicted RBP12.36□□□□□ -0.43
TPM1-221ENST00000559831 GGA3Q9NZ52 723 aa12.36□□□□□ -0.43
TPM1-221ENST00000559831 TACC3Q9Y6A5 838 aa12.36□□□□□ -0.43
TPM1-221ENST00000559831 COL2A1P02458 1487 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms