RNA–Protein interactions for RNA: ENST00000559774.6

LRRC28-215, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-215ENST00000559774 GSG1L2A8MUP6 293 aa10.39□□□□□ -0.75
LRRC28-215ENST00000559774 REC8O95072 547 aa10.39□□□□□ -0.75
LRRC28-215ENST00000559774 CHGBP05060 677 aa10.39□□□□□ -0.75
LRRC28-215ENST00000559774 NT5C2P49902 561 aa10.39□□□□□ -0.75
LRRC28-215ENST00000559774 FSTL1Q12841 308 aa10.39□□□□□ -0.75
LRRC28-215ENST00000559774 RASA3Q14644 834 aa10.39□□□□□ -0.75
LRRC28-215ENST00000559774 SUPT20HL1Q3ZLR7 823 aa10.39□□□□□ -0.75
LRRC28-215ENST00000559774 SLFNL1Q499Z3 407 aa10.39□□□□□ -0.75
LRRC28-215ENST00000559774 SBK1Q52WX2 424 aa10.39□□□□□ -0.75
LRRC28-215ENST00000559774 KIAA1211Q6ZU35 1233 aa10.39□□□□□ -0.75
LRRC28-215ENST00000559774 TTC6Q86TZ1 520 aa10.39□□□□□ -0.75
LRRC28-215ENST00000559774 SMC1BQ8NDV3 1235 aa10.39□□□□□ -0.75
LRRC28-215ENST00000559774 TGFBRAP1Q8WUH2 860 aa10.39□□□□□ -0.75
LRRC28-215ENST00000559774 SEC62Q99442 399 aaKnown RBP10.39□□□□□ -0.75
LRRC28-215ENST00000559774 OSBPL5Q9H0X9 879 aaPredicted RBP10.39□□□□□ -0.75
LRRC28-215ENST00000559774 ARPP21Q9UBL0 812 aaPredicted RBP10.39□□□□□ -0.75
LRRC28-215ENST00000559774 CTNNA3Q9UI47 895 aa10.39□□□□□ -0.75
LRRC28-215ENST00000559774 CNTNAP1P78357 1384 aa10.39□□□□□ -0.75
LRRC28-215ENST00000559774 UNCXA6NJT0 531 aa10.38□□□□□ -0.75
LRRC28-215ENST00000559774 TCP10L2B9ZVM9 353 aa10.38□□□□□ -0.75
LRRC28-215ENST00000559774 TBC1D12O60347 775 aa10.38□□□□□ -0.75
LRRC28-215ENST00000559774 HLA-DOAP06340 250 aa10.38□□□□□ -0.75
LRRC28-215ENST00000559774 HSPD1P10809 573 aaKnown RBP10.38□□□□□ -0.75
LRRC28-215ENST00000559774 MAP3K10Q02779 954 aa10.38□□□□□ -0.75
LRRC28-215ENST00000559774 NFIAQ12857 509 aa10.38□□□□□ -0.75
LRRC28-215ENST00000559774 ZNF589Q86UQ0 364 aaPredicted RBP10.38□□□□□ -0.75
LRRC28-215ENST00000559774 METTL16Q86W50 562 aaKnown RBP10.38□□□□□ -0.75
LRRC28-215ENST00000559774 FOXP4Q8IVH2 680 aaPredicted RBP10.38□□□□□ -0.75
LRRC28-215ENST00000559774 IFNL3Q8IZI9 196 aa10.38□□□□□ -0.75
LRRC28-215ENST00000559774 EHD4Q9H223 541 aa10.38□□□□□ -0.75
LRRC28-215ENST00000559774 DDX4Q9NQI0 724 aaKnown RBP10.38□□□□□ -0.75
LRRC28-215ENST00000559774 PI4KBQ9UBF8 816 aa10.38□□□□□ -0.75
LRRC28-215ENST00000559774 HERC5Q9UII4 1024 aaKnown RBP10.38□□□□□ -0.75
LRRC28-215ENST00000559774 ADAMTSL1Q8N6G6 1762 aa10.38□□□□□ -0.75
LRRC28-215ENST00000559774 MYH2Q9UKX2 1941 aa10.38□□□□□ -0.75
LRRC28-215ENST00000559774 ASTN2O75129 1339 aaPredicted RBP10.37□□□□□ -0.75
LRRC28-215ENST00000559774 ITGBL1O95965 494 aaPredicted RBP10.37□□□□□ -0.75
LRRC28-215ENST00000559774 APPP05067 770 aa10.37□□□□□ -0.75
LRRC28-215ENST00000559774 PCP11498 1178 aaKnown RBP10.37□□□□□ -0.75
LRRC28-215ENST00000559774 NF2P35240 595 aa10.37□□□□□ -0.75
LRRC28-215ENST00000559774 FKBP1BP68106 108 aa10.37□□□□□ -0.75
LRRC28-215ENST00000559774 SDR42E1Q8WUS8 393 aa10.37□□□□□ -0.75
LRRC28-215ENST00000559774 MAP4K1Q92918 833 aa10.37□□□□□ -0.75
LRRC28-215ENST00000559774 TEPSINQ96N21 525 aa10.37□□□□□ -0.75
LRRC28-215ENST00000559774 NAPBQ9H115 298 aa10.37□□□□□ -0.75
LRRC28-215ENST00000559774 ZNF287Q9HBT7 754 aa10.37□□□□□ -0.75
LRRC28-215ENST00000559774 MCM9Q9NXL9 1143 aa10.37□□□□□ -0.75
LRRC28-215ENST00000559774 ANAPC4Q9UJX5 808 aa10.37□□□□□ -0.75
LRRC28-215ENST00000559774 FOXP2O15409 715 aa10.36□□□□□ -0.75
LRRC28-215ENST00000559774 PRKAB2O43741 272 aa10.36□□□□□ -0.75
LRRC28-215ENST00000559774 FGAP02671 866 aa10.36□□□□□ -0.75
LRRC28-215ENST00000559774 SLC3A2P08195 630 aaKnown RBP10.36□□□□□ -0.75
LRRC28-215ENST00000559774 POTEIP0CG38 1075 aa10.36□□□□□ -0.75
LRRC28-215ENST00000559774 POTEJP0CG39 1038 aa10.36□□□□□ -0.75
LRRC28-215ENST00000559774 TDO2P48775 406 aa10.36□□□□□ -0.75
LRRC28-215ENST00000559774 CACNB3P54284 484 aa10.36□□□□□ -0.75
LRRC28-215ENST00000559774 PICALMQ13492 652 aa10.36□□□□□ -0.75
LRRC28-215ENST00000559774 C12orf60Q5U649 245 aa10.36□□□□□ -0.75
LRRC28-215ENST00000559774 DCAF15Q66K64 600 aa10.36□□□□□ -0.75
LRRC28-215ENST00000559774 CTR9Q6PD62 1173 aa10.36□□□□□ -0.75
LRRC28-215ENST00000559774 CCDC129Q6ZRS4 1044 aa10.36□□□□□ -0.75
LRRC28-215ENST00000559774 USP48Q86UV5 1035 aa10.36□□□□□ -0.75
LRRC28-215ENST00000559774 MAPKAPK5Q8IW41 473 aa10.36□□□□□ -0.75
LRRC28-215ENST00000559774 ZSCAN29Q8IWY8 852 aaPredicted RBP10.36□□□□□ -0.75
LRRC28-215ENST00000559774 CSRNP1Q96S65 589 aa10.36□□□□□ -0.75
LRRC28-215ENST00000559774 TMEM39BQ9GZU3 492 aa10.36□□□□□ -0.75
LRRC28-215ENST00000559774 U3KPZ7 1027 aaPredicted RBP10.36□□□□□ -0.75
LRRC28-215ENST00000559774 MYH7P12883 1935 aa10.36□□□□□ -0.75
LRRC28-215ENST00000559774 DDTLA6NHG4 134 aaPredicted RBP10.35□□□□□ -0.75
LRRC28-215ENST00000559774 USP17L12C9JPN9 530 aa10.35□□□□□ -0.75
LRRC28-215ENST00000559774 USP17L21D6R901 530 aa10.35□□□□□ -0.75
LRRC28-215ENST00000559774 PPP1R12BO60237 982 aaPredicted RBP10.35□□□□□ -0.75
LRRC28-215ENST00000559774 POLR3DP05423 398 aaPredicted RBP10.35□□□□□ -0.75
LRRC28-215ENST00000559774 TCP10Q12799 353 aa10.35□□□□□ -0.75
LRRC28-215ENST00000559774 MAP3K11Q16584 847 aa10.35□□□□□ -0.75
LRRC28-215ENST00000559774 VPS53Q5VIR6 699 aa10.35□□□□□ -0.75
LRRC28-215ENST00000559774 MAP1SQ66K74 1059 aaPredicted RBP10.35□□□□□ -0.75
LRRC28-215ENST00000559774 SH3BP5LQ7L8J4 393 aa10.35□□□□□ -0.75
LRRC28-215ENST00000559774 GLIS2Q9BZE0 524 aaPredicted RBP10.35□□□□□ -0.75
LRRC28-215ENST00000559774 LSG1Q9H089 658 aaKnown RBP10.35□□□□□ -0.75
LRRC28-215ENST00000559774 IL25Q9H293 177 aa10.35□□□□□ -0.75
LRRC28-215ENST00000559774 EPB41L4AQ9HCS5 686 aaPredicted RBP10.35□□□□□ -0.75
LRRC28-215ENST00000559774 GINM1Q9NU53 330 aa10.35□□□□□ -0.75
LRRC28-215ENST00000559774 SWAP70Q9UH65 585 aa10.35□□□□□ -0.75
LRRC28-215ENST00000559774 SERPINB13Q9UIV8 391 aa10.35□□□□□ -0.75
LRRC28-215ENST00000559774 PALD1Q9ULE6 856 aa10.35□□□□□ -0.75
LRRC28-215ENST00000559774 MYO5AQ9Y4I1 1855 aaKnown RBP10.35□□□□□ -0.75
LRRC28-215ENST00000559774 ROBO3Q96MS0 1386 aa10.35□□□□□ -0.75
LRRC28-215ENST00000559774 ECM29Q5VYK3 1845 aa10.35□□□□□ -0.75
LRRC28-215ENST00000559774 PASKQ96RG2 1323 aa10.34□□□□□ -0.75
LRRC28-215ENST00000559774 ADM5C9JUS6 153 aa10.34□□□□□ -0.75
LRRC28-215ENST00000559774 ZNF213O14771 459 aa10.34□□□□□ -0.75
LRRC28-215ENST00000559774 FGRP09769 529 aa10.34□□□□□ -0.75
LRRC28-215ENST00000559774 GABPAQ06546 454 aa10.34□□□□□ -0.75
LRRC28-215ENST00000559774 IMMTQ16891 758 aaKnown RBP10.34□□□□□ -0.75
LRRC28-215ENST00000559774 C8orf34Q49A92 452 aa10.34□□□□□ -0.75
LRRC28-215ENST00000559774 RNF20Q5VTR2 975 aa10.34□□□□□ -0.75
LRRC28-215ENST00000559774 ZFPM1Q8IX07 1006 aa10.34□□□□□ -0.75
LRRC28-215ENST00000559774 CNKSR2Q8WXI2 1034 aa10.34□□□□□ -0.75
LRRC28-215ENST00000559774 CDCA5Q96FF9 252 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms