RNA–Protein interactions for RNA: ENST00000559598.6

CRNDE-207, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-207ENST00000559598 DNAJB12Q9NXW2 375 aaKnown RBP8.71□□□□□ -1.02
CRNDE-207ENST00000559598 NOP53Q9NZM5 478 aaKnown RBP8.71□□□□□ -1.02
CRNDE-207ENST00000559598 USP35Q9P2H5 1018 aa8.71□□□□□ -1.02
CRNDE-207ENST00000559598 PRR36Q9H6K5 1346 aa8.71□□□□□ -1.02
CRNDE-207ENST00000559598 MAP3K5Q99683 1374 aa8.71□□□□□ -1.02
CRNDE-207ENST00000559598 CRB1P82279 1406 aa8.71□□□□□ -1.02
CRNDE-207ENST00000559598 COL5A2P05997 1499 aaPredicted RBP8.7□□□□□ -1.02
CRNDE-207ENST00000559598 KRBA1A5PL33 1030 aa8.7□□□□□ -1.02
CRNDE-207ENST00000559598 H3BRB1 525 aa8.7□□□□□ -1.02
CRNDE-207ENST00000559598 ADAM23O75077 832 aa8.7□□□□□ -1.02
CRNDE-207ENST00000559598 DGKGP49619 791 aa8.7□□□□□ -1.02
CRNDE-207ENST00000559598 DNM1Q05193 864 aaKnown RBP8.7□□□□□ -1.02
CRNDE-207ENST00000559598 CHRNA2Q15822 529 aa8.7□□□□□ -1.02
CRNDE-207ENST00000559598 TUT1Q9H6E5 874 aaKnown RBP8.7□□□□□ -1.02
CRNDE-207ENST00000559598 AATKQ6ZMQ8 1374 aa8.7□□□□□ -1.02
CRNDE-207ENST00000559598 CEP350Q5VT06 3117 aa8.69□□□□□ -1.02
CRNDE-207ENST00000559598 PDGFAP04085 211 aa8.69□□□□□ -1.02
CRNDE-207ENST00000559598 RPLP1P05386 114 aaKnown RBP8.69□□□□□ -1.02
CRNDE-207ENST00000559598 PCSK2P16519 638 aa8.69□□□□□ -1.02
CRNDE-207ENST00000559598 MZF1P28698 734 aaPredicted RBP8.69□□□□□ -1.02
CRNDE-207ENST00000559598 ZC3H6P61129 1189 aaKnown RBP8.69□□□□□ -1.02
CRNDE-207ENST00000559598 AAMPQ13685 434 aa8.69□□□□□ -1.02
CRNDE-207ENST00000559598 GLYCTKQ8IVS8 523 aa8.69□□□□□ -1.02
CRNDE-207ENST00000559598 TRAIPQ9BWF2 469 aa8.69□□□□□ -1.02
CRNDE-207ENST00000559598 MTFR1LQ9H019 292 aa8.69□□□□□ -1.02
CRNDE-207ENST00000559598 TLR7Q9NYK1 1049 aaKnown RBP8.69□□□□□ -1.02
CRNDE-207ENST00000559598 SLC6A14Q9UN76 642 aa8.69□□□□□ -1.02
CRNDE-207ENST00000559598 POLR3AO14802 1390 aaPredicted RBP8.69□□□□□ -1.02
CRNDE-207ENST00000559598 MMP20O60882 483 aa8.68□□□□□ -1.02
CRNDE-207ENST00000559598 COL8A1P27658 744 aa8.68□□□□□ -1.02
CRNDE-207ENST00000559598 PCSK7Q16549 785 aa8.68□□□□□ -1.02
CRNDE-207ENST00000559598 TRPM4Q8TD43 1214 aa8.68□□□□□ -1.02
CRNDE-207ENST00000559598 SYT17Q9BSW7 474 aa8.68□□□□□ -1.02
CRNDE-207ENST00000559598 HIRIP3Q9BW71 556 aaPredicted RBP8.68□□□□□ -1.02
CRNDE-207ENST00000559598 STK32BQ9NY57 414 aa8.68□□□□□ -1.02
CRNDE-207ENST00000559598 POLIQ9UNA4 740 aa8.68□□□□□ -1.02
CRNDE-207ENST00000559598 GNEQ9Y223 722 aaKnown RBP8.68□□□□□ -1.02
CRNDE-207ENST00000559598 STARD13Q9Y3M8 1113 aa8.68□□□□□ -1.02
CRNDE-207ENST00000559598 USP19O94966 1318 aa8.68□□□□□ -1.02
CRNDE-207ENST00000559598 BRD4O60885 1362 aaPredicted RBP8.68□□□□□ -1.02
CRNDE-207ENST00000559598 QSER1Q2KHR3 1735 aa8.68□□□□□ -1.02
CRNDE-207ENST00000559598 ZBTB42B2RXF5 422 aa8.67□□□□□ -1.02
CRNDE-207ENST00000559598 FZD6O60353 706 aa8.67□□□□□ -1.02
CRNDE-207ENST00000559598 ZBTB7AO95365 584 aa8.67□□□□□ -1.02
CRNDE-207ENST00000559598 PSAPP07602 524 aa8.67□□□□□ -1.02
CRNDE-207ENST00000559598 GPLD1P80108 840 aa8.67□□□□□ -1.02
CRNDE-207ENST00000559598 ECM1Q16610 540 aa8.67□□□□□ -1.02
CRNDE-207ENST00000559598 MPHOSPH9Q99550 1183 aa8.67□□□□□ -1.02
CRNDE-207ENST00000559598 GOLGB1Q14789 3259 aaKnown RBP8.67□□□□□ -1.02
CRNDE-207ENST00000559598 NHSQ6T4R5 1651 aa8.66□□□□□ -1.02
CRNDE-207ENST00000559598 M0R082 166 aa8.66□□□□□ -1.02
CRNDE-207ENST00000559598 SOX18P35713 384 aa8.66□□□□□ -1.02
CRNDE-207ENST00000559598 NRLP54845 237 aa8.66□□□□□ -1.02
CRNDE-207ENST00000559598 DDB1Q16531 1140 aa8.66□□□□□ -1.02
CRNDE-207ENST00000559598 PDE12Q6L8Q7 609 aaKnown RBP8.66□□□□□ -1.02
CRNDE-207ENST00000559598 TTC16Q8NEE8 873 aa8.66□□□□□ -1.02
CRNDE-207ENST00000559598 ZNF417Q8TAU3 575 aa8.66□□□□□ -1.02
CRNDE-207ENST00000559598 ZNF587Q96SQ5 575 aaPredicted RBP8.66□□□□□ -1.02
CRNDE-207ENST00000559598 GGNBP2Q9H3C7 697 aa8.66□□□□□ -1.02
CRNDE-207ENST00000559598 TRAK1Q9UPV9 953 aa8.66□□□□□ -1.02
CRNDE-207ENST00000559598 COL24A1Q17RW2 1714 aa8.66□□□□□ -1.02
CRNDE-207ENST00000559598 PAPPAQ13219 1627 aa8.65□□□□□ -1.02
CRNDE-207ENST00000559598 K7ELQ4 463 aaPredicted RBP8.65□□□□□ -1.02
CRNDE-207ENST00000559598 ALBP02768 609 aa8.65□□□□□ -1.02
CRNDE-207ENST00000559598 MLLT1Q03111 559 aaPredicted RBP8.65□□□□□ -1.02
CRNDE-207ENST00000559598 PLAURQ03405 335 aa8.65□□□□□ -1.02
CRNDE-207ENST00000559598 KCNA1Q09470 495 aa8.65□□□□□ -1.02
CRNDE-207ENST00000559598 SLC15A2Q16348 729 aa8.65□□□□□ -1.02
CRNDE-207ENST00000559598 C8orf34Q49A92 452 aa8.65□□□□□ -1.02
CRNDE-207ENST00000559598 XKR5Q6UX68 686 aa8.65□□□□□ -1.02
CRNDE-207ENST00000559598 C20orf204Q6ZNR8 217 aa8.65□□□□□ -1.02
CRNDE-207ENST00000559598 ZNF438Q7Z4V0 828 aa8.65□□□□□ -1.02
CRNDE-207ENST00000559598 FAM35AQ86V20 835 aa8.65□□□□□ -1.02
CRNDE-207ENST00000559598 MICALL1Q8N3F8 863 aa8.65□□□□□ -1.02
CRNDE-207ENST00000559598 SUV39H2Q9H5I1 410 aa8.65□□□□□ -1.02
CRNDE-207ENST00000559598 ELP3Q9H9T3 547 aa8.65□□□□□ -1.02
CRNDE-207ENST00000559598 CCDC87Q9NVE4 849 aa8.65□□□□□ -1.02
CRNDE-207ENST00000559598 TMEM63CQ9P1W3 806 aa8.65□□□□□ -1.02
CRNDE-207ENST00000559598 NAGPAQ9UK23 515 aa8.65□□□□□ -1.02
CRNDE-207ENST00000559598 SHANK3Q9BYB0 1731 aa8.65□□□□□ -1.03
CRNDE-207ENST00000559598 SLIT3O75094 1523 aa8.64□□□□□ -1.03
CRNDE-207ENST00000559598 COL18A1P39060 1754 aa8.64□□□□□ -1.03
CRNDE-207ENST00000559598 HOXD8P13378 290 aaPredicted RBP8.64□□□□□ -1.03
CRNDE-207ENST00000559598 CPB1P15086 417 aa8.64□□□□□ -1.03
CRNDE-207ENST00000559598 USP5P45974 858 aa8.64□□□□□ -1.03
CRNDE-207ENST00000559598 ARHGAP4P98171 946 aa8.64□□□□□ -1.03
CRNDE-207ENST00000559598 TTC39BQ5VTQ0 682 aaPredicted RBP8.64□□□□□ -1.03
CRNDE-207ENST00000559598 OR13H1Q8NG92 308 aa8.64□□□□□ -1.03
CRNDE-207ENST00000559598 PRDM6Q9NQX0 595 aa8.64□□□□□ -1.03
CRNDE-207ENST00000559598 ABI2Q9NYB9 513 aaPredicted RBP8.64□□□□□ -1.03
CRNDE-207ENST00000559598 QRICH2Q9H0J4 1663 aa8.64□□□□□ -1.03
CRNDE-207ENST00000559598 KAT6BQ8WYB5 2073 aa8.63□□□□□ -1.03
CRNDE-207ENST00000559598 KIAA1210Q9ULL0 1709 aa8.63□□□□□ -1.03
CRNDE-207ENST00000559598 ACEP12821 1306 aa8.63□□□□□ -1.03
CRNDE-207ENST00000559598 A6NHS1 94 aa8.63□□□□□ -1.03
CRNDE-207ENST00000559598 SOWAHDA6NJG2 315 aa8.63□□□□□ -1.03
CRNDE-207ENST00000559598 GCP02774 474 aa8.63□□□□□ -1.03
CRNDE-207ENST00000559598 TXNRD1Q16881 649 aa8.63□□□□□ -1.03
CRNDE-207ENST00000559598 C8orf86Q6ZUL3 223 aa8.63□□□□□ -1.03
CRNDE-207ENST00000559598 HFE2Q6ZVN8 426 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms