RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 SENP6Q9GZR1 1112 aaPredicted RBP12.29□□□□□ -0.44
SMAD3-211ENST00000559460 IQSEC3Q9UPP2 1182 aaPredicted RBP12.29□□□□□ -0.44
SMAD3-211ENST00000559460 TRIM75PA6NK02 468 aa12.28□□□□□ -0.44
SMAD3-211ENST00000559460 ZKSCAN1P17029 563 aaPredicted RBP12.28□□□□□ -0.44
SMAD3-211ENST00000559460 CYP2B6P20813 491 aa12.28□□□□□ -0.44
SMAD3-211ENST00000559460 GNAI1P63096 354 aa12.28□□□□□ -0.44
SMAD3-211ENST00000559460 PDE3AQ14432 1141 aa12.28□□□□□ -0.44
SMAD3-211ENST00000559460 SHHQ15465 462 aa12.28□□□□□ -0.44
SMAD3-211ENST00000559460 ADAMTS19Q8TE59 1207 aa12.28□□□□□ -0.44
SMAD3-211ENST00000559460 TRIB2Q92519 343 aa12.28□□□□□ -0.44
SMAD3-211ENST00000559460 RUNDC1Q96C34 613 aa12.28□□□□□ -0.44
SMAD3-211ENST00000559460 UHRF1Q96T88 793 aaPredicted RBP12.28□□□□□ -0.44
SMAD3-211ENST00000559460 MRIQ9BWK5 157 aa12.28□□□□□ -0.44
SMAD3-211ENST00000559460 TTYH1Q9H313 450 aaPredicted RBP12.28□□□□□ -0.44
SMAD3-211ENST00000559460 LRRFIP2Q9Y608 721 aaKnown RBP12.28□□□□□ -0.44
SMAD3-211ENST00000559460 PTPRAP18433 802 aa12.27□□□□□ -0.45
SMAD3-211ENST00000559460 APOBEC3HQ6NTF7 200 aaKnown RBP12.27□□□□□ -0.45
SMAD3-211ENST00000559460 CCAR1Q8IX12 1150 aaKnown RBP12.27□□□□□ -0.45
SMAD3-211ENST00000559460 SOCS4Q8WXH5 440 aa12.27□□□□□ -0.45
SMAD3-211ENST00000559460 PPM1EQ8WY54 764 aa12.27□□□□□ -0.45
SMAD3-211ENST00000559460 FAM84BQ96KN1 310 aaPredicted RBP12.27□□□□□ -0.45
SMAD3-211ENST00000559460 NUDT12Q9BQG2 462 aa12.27□□□□□ -0.45
SMAD3-211ENST00000559460 PRDM5Q9NQX1 630 aaPredicted RBP12.27□□□□□ -0.45
SMAD3-211ENST00000559460 THEGQ9P2T0 379 aa12.27□□□□□ -0.45
SMAD3-211ENST00000559460 SUGT1Q9Y2Z0 365 aa12.27□□□□□ -0.45
SMAD3-211ENST00000559460 AFG3L2Q9Y4W6 797 aa12.27□□□□□ -0.45
SMAD3-211ENST00000559460 SPTBN5Q9NRC6 3674 aaKnown RBP12.27□□□□□ -0.45
SMAD3-211ENST00000559460 A0A1B0GUL6 1792 aa12.26□□□□□ -0.45
SMAD3-211ENST00000559460 ATN1P54259 1190 aaPredicted RBP12.26□□□□□ -0.45
SMAD3-211ENST00000559460 WDR43Q15061 677 aaKnown RBP eCLIP12.26□□□□□ -0.45
SMAD3-211ENST00000559460 GRIK5Q16478 980 aa12.26□□□□□ -0.45
SMAD3-211ENST00000559460 MAP3K21Q5TCX8 1036 aa12.26□□□□□ -0.45
SMAD3-211ENST00000559460 HHIPL2Q6UWX4 724 aa12.26□□□□□ -0.45
SMAD3-211ENST00000559460 ZSCAN29Q8IWY8 852 aaPredicted RBP12.26□□□□□ -0.45
SMAD3-211ENST00000559460 GAS2L1Q99501 681 aaPredicted RBP12.26□□□□□ -0.45
SMAD3-211ENST00000559460 CWC22Q9HCG8 908 aaKnown RBP12.26□□□□□ -0.45
SMAD3-211ENST00000559460 IFT57Q9NWB7 429 aa12.26□□□□□ -0.45
SMAD3-211ENST00000559460 ARIH1Q9Y4X5 557 aaPredicted RBP12.26□□□□□ -0.45
SMAD3-211ENST00000559460 MRPS5P82675 430 aaKnown RBP12.25□□□□□ -0.45
SMAD3-211ENST00000559460 C9orf50Q5SZB4 431 aa12.25□□□□□ -0.45
SMAD3-211ENST00000559460 ZNF594Q96JF6 807 aaPredicted RBP12.25□□□□□ -0.45
SMAD3-211ENST00000559460 ASB2Q96Q27 587 aa12.25□□□□□ -0.45
SMAD3-211ENST00000559460 ATP11BQ9Y2G3 1177 aa12.25□□□□□ -0.45
SMAD3-211ENST00000559460 SYNGAP1Q96PV0 1343 aa12.25□□□□□ -0.45
SMAD3-211ENST00000559460 AK9Q5TCS8 1911 aa12.25□□□□□ -0.45
SMAD3-211ENST00000559460 XRCC5P13010 732 aaKnown RBP12.24□□□□□ -0.45
SMAD3-211ENST00000559460 CASP7P55210 303 aa12.24□□□□□ -0.45
SMAD3-211ENST00000559460 RTP1P59025 263 aa12.24□□□□□ -0.45
SMAD3-211ENST00000559460 CACNB2Q08289 660 aaPredicted RBP12.24□□□□□ -0.45
SMAD3-211ENST00000559460 LMBR1LQ6UX01 489 aa12.24□□□□□ -0.45
SMAD3-211ENST00000559460 USP38Q8NB14 1042 aa12.24□□□□□ -0.45
SMAD3-211ENST00000559460 PROCA1Q8NCQ7 364 aaPredicted RBP12.24□□□□□ -0.45
SMAD3-211ENST00000559460 LINS1Q8NG48 757 aa12.24□□□□□ -0.45
SMAD3-211ENST00000559460 RNPC3Q96LT9 517 aaKnown RBP12.24□□□□□ -0.45
SMAD3-211ENST00000559460 GJD2Q9UKL4 321 aa12.24□□□□□ -0.45
SMAD3-211ENST00000559460 CTNND1O60716 968 aaKnown RBP12.23□□□□□ -0.45
SMAD3-211ENST00000559460 CCND3P30281 292 aaPredicted RBP12.23□□□□□ -0.45
SMAD3-211ENST00000559460 FKBP5Q13451 457 aaPredicted RBP12.23□□□□□ -0.45
SMAD3-211ENST00000559460 TREML2Q5T2D2 321 aa12.23□□□□□ -0.45
SMAD3-211ENST00000559460 C8orf58Q8NAV2 365 aa12.23□□□□□ -0.45
SMAD3-211ENST00000559460 TSPYL2Q9H2G4 693 aaPredicted RBP12.23□□□□□ -0.45
SMAD3-211ENST00000559460 TTC28Q96AY4 2481 aa12.23□□□□□ -0.45
SMAD3-211ENST00000559460 MAST2Q6P0Q8 1798 aa12.23□□□□□ -0.45
SMAD3-211ENST00000559460 MROH5Q6ZUA9 1318 aa12.22□□□□□ -0.45
SMAD3-211ENST00000559460 MSCO60682 206 aa12.22□□□□□ -0.45
SMAD3-211ENST00000559460 ZNF853P0CG23 659 aa12.22□□□□□ -0.45
SMAD3-211ENST00000559460 RGS2P41220 211 aa12.22□□□□□ -0.45
SMAD3-211ENST00000559460 IRX3P78415 501 aaPredicted RBP12.22□□□□□ -0.45
SMAD3-211ENST00000559460 GRIN2CQ14957 1233 aa12.22□□□□□ -0.45
SMAD3-211ENST00000559460 CDC42EP5Q6NZY7 148 aa12.22□□□□□ -0.45
SMAD3-211ENST00000559460 DNAAF4Q8WXU2 420 aa12.22□□□□□ -0.45
SMAD3-211ENST00000559460 BADQ92934 168 aa12.22□□□□□ -0.45
SMAD3-211ENST00000559460 USP40Q9NVE5 1235 aa12.22□□□□□ -0.45
SMAD3-211ENST00000559460 DNAJB2P25686 324 aa12.21□□□□□ -0.45
SMAD3-211ENST00000559460 CNGA1P29973 690 aa12.21□□□□□ -0.45
SMAD3-211ENST00000559460 MAPK4P31152 587 aa12.21□□□□□ -0.45
SMAD3-211ENST00000559460 FOXO4P98177 505 aa12.21□□□□□ -0.45
SMAD3-211ENST00000559460 NFIAQ12857 509 aa12.21□□□□□ -0.45
SMAD3-211ENST00000559460 MFSD14CQ5VZR4 134 aa12.21□□□□□ -0.45
SMAD3-211ENST00000559460 LHX8Q68G74 356 aa12.21□□□□□ -0.45
SMAD3-211ENST00000559460 FBXO33Q7Z6M2 555 aa12.21□□□□□ -0.45
SMAD3-211ENST00000559460 ASCC2Q9H1I8 757 aaPredicted RBP12.21□□□□□ -0.45
SMAD3-211ENST00000559460 SPINK5Q9NQ38 1064 aaPredicted RBP12.21□□□□□ -0.45
SMAD3-211ENST00000559460 PHF20L1A8MW92 1017 aa12.2□□□□□ -0.46
SMAD3-211ENST00000559460 KBTBD13C9JR72 458 aa12.2□□□□□ -0.46
SMAD3-211ENST00000559460 DNM1LO00429 736 aa12.2□□□□□ -0.46
SMAD3-211ENST00000559460 SLC4A2P04920 1241 aa12.2□□□□□ -0.46
SMAD3-211ENST00000559460 FLIIQ13045 1269 aa12.2□□□□□ -0.46
SMAD3-211ENST00000559460 METTL24Q5JXM2 366 aa12.2□□□□□ -0.46
SMAD3-211ENST00000559460 WDR66Q8TBY9 1149 aa12.2□□□□□ -0.46
SMAD3-211ENST00000559460 APBA2Q99767 749 aa12.2□□□□□ -0.46
SMAD3-211ENST00000559460 TBC1D2Q9BYX2 928 aa12.2□□□□□ -0.46
SMAD3-211ENST00000559460 ZNF576Q9H609 170 aa12.2□□□□□ -0.46
SMAD3-211ENST00000559460 DAGLAQ9Y4D2 1042 aa12.2□□□□□ -0.46
SMAD3-211ENST00000559460 EYSQ5T1H1 3165 aa12.2□□□□□ -0.46
SMAD3-211ENST00000559460 HMGCS2P54868 508 aa12.19□□□□□ -0.46
SMAD3-211ENST00000559460 GPRC5AQ8NFJ5 357 aa12.19□□□□□ -0.46
SMAD3-211ENST00000559460 LPAR1Q92633 364 aa12.19□□□□□ -0.46
SMAD3-211ENST00000559460 MORF4L1Q9UBU8 362 aa12.19□□□□□ -0.46
SMAD3-211ENST00000559460 FAM198AQ9UFP1 575 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms