RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.31□□□□□ -1.56
SNX1-205ENST00000559339 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.31□□□□□ -1.56
SNX1-205ENST00000559339 DNAJC2Q99543 621 aaKnown RBP5.31□□□□□ -1.56
SNX1-205ENST00000559339 TRIM34Q9BYJ4 488 aa5.31□□□□□ -1.56
SNX1-205ENST00000559339 DHX36Q9H2U1 1008 aaKnown RBP5.31□□□□□ -1.56
SNX1-205ENST00000559339 DCTPP1Q9H773 170 aa5.31□□□□□ -1.56
SNX1-205ENST00000559339 ELP3Q9H9T3 547 aa5.31□□□□□ -1.56
SNX1-205ENST00000559339 RNF186Q9NXI6 227 aa5.31□□□□□ -1.56
SNX1-205ENST00000559339 AATFQ9NY61 560 aaKnown RBP eCLIP5.31□□□□□ -1.56
SNX1-205ENST00000559339 PI4KBQ9UBF8 816 aa5.31□□□□□ -1.56
SNX1-205ENST00000559339 FZD1Q9UP38 647 aa5.31□□□□□ -1.56
SNX1-205ENST00000559339 TRPM7Q96QT4 1865 aa5.3□□□□□ -1.56
SNX1-205ENST00000559339 A0A1B0GUL6 1792 aa5.3□□□□□ -1.56
SNX1-205ENST00000559339 GOLIM4O00461 696 aa5.3□□□□□ -1.56
SNX1-205ENST00000559339 ERC2O15083 957 aa5.3□□□□□ -1.56
SNX1-205ENST00000559339 HLA-DOAP06340 250 aa5.3□□□□□ -1.56
SNX1-205ENST00000559339 HSPA8P11142 646 aaKnown RBP5.3□□□□□ -1.56
SNX1-205ENST00000559339 ATP5JP18859 108 aa5.3□□□□□ -1.56
SNX1-205ENST00000559339 USP5P45974 858 aa5.3□□□□□ -1.56
SNX1-205ENST00000559339 PPP4CP60510 307 aa5.3□□□□□ -1.56
SNX1-205ENST00000559339 PPATQ06203 517 aa5.3□□□□□ -1.56
SNX1-205ENST00000559339 SNAPC2Q13487 334 aa5.3□□□□□ -1.56
SNX1-205ENST00000559339 LRRFIP1Q32MZ4 808 aaKnown RBP5.3□□□□□ -1.56
SNX1-205ENST00000559339 SLC9C2Q5TAH2 1124 aa5.3□□□□□ -1.56
SNX1-205ENST00000559339 ZSCAN25Q6NSZ9 544 aa5.3□□□□□ -1.56
SNX1-205ENST00000559339 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.3□□□□□ -1.56
SNX1-205ENST00000559339 CDAN1Q8IWY9 1227 aa5.3□□□□□ -1.56
SNX1-205ENST00000559339 TEX11Q8IYF3 940 aa5.3□□□□□ -1.56
SNX1-205ENST00000559339 CRACR2BQ8N4Y2 399 aaPredicted RBP5.3□□□□□ -1.56
SNX1-205ENST00000559339 MAGEB6Q8N7X4 407 aa5.3□□□□□ -1.56
SNX1-205ENST00000559339 ZKSCAN4Q969J2 545 aaPredicted RBP5.3□□□□□ -1.56
SNX1-205ENST00000559339 GCC1Q96CN9 775 aa5.3□□□□□ -1.56
SNX1-205ENST00000559339 OPTNQ96CV9 577 aa5.3□□□□□ -1.56
SNX1-205ENST00000559339 OTUD5Q96G74 571 aa5.3□□□□□ -1.56
SNX1-205ENST00000559339 DDRGK1Q96HY6 314 aa5.3□□□□□ -1.56
SNX1-205ENST00000559339 WNK4Q96J92 1243 aa5.3□□□□□ -1.56
SNX1-205ENST00000559339 CLMNQ96JQ2 1002 aa5.3□□□□□ -1.56
SNX1-205ENST00000559339 CRBNQ96SW2 442 aa5.3□□□□□ -1.56
SNX1-205ENST00000559339 ZIC5Q96T25 663 aa5.3□□□□□ -1.56
SNX1-205ENST00000559339 OSBPL5Q9H0X9 879 aaPredicted RBP5.3□□□□□ -1.56
SNX1-205ENST00000559339 BOLA2Q9H3K6 86 aa5.3□□□□□ -1.56
SNX1-205ENST00000559339 PICK1Q9NRD5 415 aa5.3□□□□□ -1.56
SNX1-205ENST00000559339 ECHDC1Q9NTX5 307 aa5.3□□□□□ -1.56
SNX1-205ENST00000559339 FAM198AQ9UFP1 575 aa5.3□□□□□ -1.56
SNX1-205ENST00000559339 TSKSQ9UJT2 592 aa5.3□□□□□ -1.56
SNX1-205ENST00000559339 POLR2AP24928 1970 aaKnown RBP5.29□□□□□ -1.56
SNX1-205ENST00000559339 MAGEB6P1A0A0J9YX57 407 aa5.29□□□□□ -1.56
SNX1-205ENST00000559339 SPDYE5A6NIY4 337 aa5.29□□□□□ -1.56
SNX1-205ENST00000559339 IRF6O14896 467 aa5.29□□□□□ -1.56
SNX1-205ENST00000559339 TBC1D12O60347 775 aa5.29□□□□□ -1.56
SNX1-205ENST00000559339 CTNND1O60716 968 aaKnown RBP5.29□□□□□ -1.56
SNX1-205ENST00000559339 CETPP11597 493 aa5.29□□□□□ -1.56
SNX1-205ENST00000559339 RHBDL3P58872 404 aa5.29□□□□□ -1.56
SNX1-205ENST00000559339 HDAC1Q13547 482 aaPredicted RBP5.29□□□□□ -1.56
SNX1-205ENST00000559339 TTC6Q86TZ1 520 aa5.29□□□□□ -1.56
SNX1-205ENST00000559339 IFNL1Q8IU54 200 aa5.29□□□□□ -1.56
SNX1-205ENST00000559339 ZFPM1Q8IX07 1006 aa5.29□□□□□ -1.56
SNX1-205ENST00000559339 AMOTL1Q8IY63 956 aa5.29□□□□□ -1.56
SNX1-205ENST00000559339 MIGA1Q8NAN2 632 aa5.29□□□□□ -1.56
SNX1-205ENST00000559339 SH3RF3Q8TEJ3 882 aaPredicted RBP5.29□□□□□ -1.56
SNX1-205ENST00000559339 ZNF384Q8TF68 577 aa5.29□□□□□ -1.56
SNX1-205ENST00000559339 TGFBRAP1Q8WUH2 860 aa5.29□□□□□ -1.56
SNX1-205ENST00000559339 HAUS7Q99871 368 aa5.29□□□□□ -1.56
SNX1-205ENST00000559339 RWDD1Q9H446 243 aaPredicted RBP5.29□□□□□ -1.56
SNX1-205ENST00000559339 ANTXR1Q9H6X2 564 aa5.29□□□□□ -1.56
SNX1-205ENST00000559339 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.29□□□□□ -1.56
SNX1-205ENST00000559339 DDX4Q9NQI0 724 aaKnown RBP5.29□□□□□ -1.56
SNX1-205ENST00000559339 PIH1D3Q9NQM4 214 aaKnown RBP5.29□□□□□ -1.56
SNX1-205ENST00000559339 PAG1Q9NWQ8 432 aa5.29□□□□□ -1.56
SNX1-205ENST00000559339 HERC5Q9UII4 1024 aaKnown RBP5.29□□□□□ -1.56
SNX1-205ENST00000559339 SSUH2Q9Y2M2 353 aa5.29□□□□□ -1.56
SNX1-205ENST00000559339 SUPT16HQ9Y5B9 1047 aaKnown RBP5.29□□□□□ -1.56
SNX1-205ENST00000559339 PCDHB15Q9Y5E8 787 aa5.29□□□□□ -1.56
SNX1-205ENST00000559339 NDUFB9Q9Y6M9 179 aa5.29□□□□□ -1.56
SNX1-205ENST00000559339 SSC5DA1L4H1 1573 aa5.29□□□□□ -1.56
SNX1-205ENST00000559339 FLT1P17948 1338 aa5.28□□□□□ -1.56
SNX1-205ENST00000559339 TTC41PQ6P2S7 1318 aa5.28□□□□□ -1.56
SNX1-205ENST00000559339 CCL15-CCL14A0A0B4J2E2 113 aa5.28□□□□□ -1.56
SNX1-205ENST00000559339 TESPA1A2RU30 521 aaPredicted RBP5.28□□□□□ -1.56
SNX1-205ENST00000559339 DDTLA6NHG4 134 aaPredicted RBP5.28□□□□□ -1.56
SNX1-205ENST00000559339 CXCL11O14625 94 aa5.28□□□□□ -1.56
SNX1-205ENST00000559339 SMARCA5O60264 1052 aaPredicted RBP5.28□□□□□ -1.56
SNX1-205ENST00000559339 GLRX3O76003 335 aaKnown RBP5.28□□□□□ -1.56
SNX1-205ENST00000559339 TBC1D8O95759 1140 aa5.28□□□□□ -1.56
SNX1-205ENST00000559339 PDE6AP16499 860 aa5.28□□□□□ -1.56
SNX1-205ENST00000559339 INPP5BP32019 993 aa5.28□□□□□ -1.56
SNX1-205ENST00000559339 PPIL2Q13356 520 aa5.28□□□□□ -1.56
SNX1-205ENST00000559339 ARHGEF6Q15052 776 aa5.28□□□□□ -1.56
SNX1-205ENST00000559339 PKN2Q16513 984 aaKnown RBP5.28□□□□□ -1.56
SNX1-205ENST00000559339 CCL15Q16663 113 aa5.28□□□□□ -1.56
SNX1-205ENST00000559339 NOM1Q5C9Z4 860 aaKnown RBP5.28□□□□□ -1.56
SNX1-205ENST00000559339 NOL9Q5SY16 702 aaKnown RBP5.28□□□□□ -1.56
SNX1-205ENST00000559339 IFFO2Q5TF58 517 aa5.28□□□□□ -1.56
SNX1-205ENST00000559339 ANKRD45Q5TZF3 282 aa5.28□□□□□ -1.56
SNX1-205ENST00000559339 FASTKD5Q7L8L6 764 aaKnown RBP5.28□□□□□ -1.56
SNX1-205ENST00000559339 FOXP4Q8IVH2 680 aaPredicted RBP5.28□□□□□ -1.56
SNX1-205ENST00000559339 MAPKAPK5Q8IW41 473 aa5.28□□□□□ -1.56
SNX1-205ENST00000559339 SCYL3Q8IZE3 742 aa5.28□□□□□ -1.56
SNX1-205ENST00000559339 CFHR5Q9BXR6 569 aa5.28□□□□□ -1.56
SNX1-205ENST00000559339 TBC1D2Q9BYX2 928 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms