RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 KRT26Q7Z3Y9 468 aa7.88□□□□□ -1.15
CHRNA3-204ENST00000559002 FAM83AQ86UY5 434 aa7.88□□□□□ -1.15
CHRNA3-204ENST00000559002 LDHDQ86WU2 507 aa7.88□□□□□ -1.15
CHRNA3-204ENST00000559002 ZSCAN29Q8IWY8 852 aaPredicted RBP7.88□□□□□ -1.15
CHRNA3-204ENST00000559002 IFNL3Q8IZI9 196 aa7.88□□□□□ -1.15
CHRNA3-204ENST00000559002 FAM151AQ8WW52 585 aa7.88□□□□□ -1.15
CHRNA3-204ENST00000559002 DSCC1Q9BVC3 393 aa7.88□□□□□ -1.15
CHRNA3-204ENST00000559002 OSBPL5Q9H0X9 879 aaPredicted RBP7.88□□□□□ -1.15
CHRNA3-204ENST00000559002 IL25Q9H293 177 aa7.88□□□□□ -1.15
CHRNA3-204ENST00000559002 DCP1AQ9NPI6 582 aaPredicted RBP7.88□□□□□ -1.15
CHRNA3-204ENST00000559002 MCM9Q9NXL9 1143 aa7.88□□□□□ -1.15
CHRNA3-204ENST00000559002 SAP30BPQ9UHR5 308 aaKnown RBP7.88□□□□□ -1.15
CHRNA3-204ENST00000559002 GSG1L2A8MUP6 293 aa7.87□□□□□ -1.15
CHRNA3-204ENST00000559002 NPM3O75607 178 aaKnown RBP7.87□□□□□ -1.15
CHRNA3-204ENST00000559002 POLR3DP05423 398 aaPredicted RBP7.87□□□□□ -1.15
CHRNA3-204ENST00000559002 POTEIP0CG38 1075 aa7.87□□□□□ -1.15
CHRNA3-204ENST00000559002 POTEJP0CG39 1038 aa7.87□□□□□ -1.15
CHRNA3-204ENST00000559002 RASA3Q14644 834 aa7.87□□□□□ -1.15
CHRNA3-204ENST00000559002 C8orf34Q49A92 452 aa7.87□□□□□ -1.15
CHRNA3-204ENST00000559002 TRIM34Q9BYJ4 488 aa7.87□□□□□ -1.15
CHRNA3-204ENST00000559002 TMEM39BQ9GZU3 492 aa7.87□□□□□ -1.15
CHRNA3-204ENST00000559002 DEFB129Q9H1M3 183 aa7.87□□□□□ -1.15
CHRNA3-204ENST00000559002 DHX36Q9H2U1 1008 aaKnown RBP7.87□□□□□ -1.15
CHRNA3-204ENST00000559002 EPB41L4AQ9HCS5 686 aaPredicted RBP7.87□□□□□ -1.15
CHRNA3-204ENST00000559002 DDX4Q9NQI0 724 aaKnown RBP7.87□□□□□ -1.15
CHRNA3-204ENST00000559002 ARPP21Q9UBL0 812 aaPredicted RBP7.87□□□□□ -1.15
CHRNA3-204ENST00000559002 FAM198AQ9UFP1 575 aa7.87□□□□□ -1.15
CHRNA3-204ENST00000559002 CTNNA3Q9UI47 895 aa7.87□□□□□ -1.15
CHRNA3-204ENST00000559002 PPP2R3BQ9Y5P8 575 aa7.87□□□□□ -1.15
CHRNA3-204ENST00000559002 U3KPZ7 1027 aaPredicted RBP7.87□□□□□ -1.15
CHRNA3-204ENST00000559002 CNTNAP1P78357 1384 aa7.86□□□□□ -1.15
CHRNA3-204ENST00000559002 ZMYM6O95789 1325 aa7.86□□□□□ -1.15
CHRNA3-204ENST00000559002 USP17L12C9JPN9 530 aa7.86□□□□□ -1.15
CHRNA3-204ENST00000559002 ADM5C9JUS6 153 aa7.86□□□□□ -1.15
CHRNA3-204ENST00000559002 USP17L21D6R901 530 aa7.86□□□□□ -1.15
CHRNA3-204ENST00000559002 SLC3A2P08195 630 aaKnown RBP7.86□□□□□ -1.15
CHRNA3-204ENST00000559002 MCCP23508 829 aa7.86□□□□□ -1.15
CHRNA3-204ENST00000559002 NF2P35240 595 aa7.86□□□□□ -1.15
CHRNA3-204ENST00000559002 PTH1RQ03431 593 aa7.86□□□□□ -1.15
CHRNA3-204ENST00000559002 ALX1Q15699 326 aa7.86□□□□□ -1.15
CHRNA3-204ENST00000559002 IMMTQ16891 758 aaKnown RBP7.86□□□□□ -1.15
CHRNA3-204ENST00000559002 SLC4A8Q2Y0W8 1093 aa7.86□□□□□ -1.15
CHRNA3-204ENST00000559002 MAP1SQ66K74 1059 aaPredicted RBP7.86□□□□□ -1.15
CHRNA3-204ENST00000559002 CHADLQ6NUI6 762 aa7.86□□□□□ -1.15
CHRNA3-204ENST00000559002 CDC37L1Q7L3B6 337 aa7.86□□□□□ -1.15
CHRNA3-204ENST00000559002 TTC6Q86TZ1 520 aa7.86□□□□□ -1.15
CHRNA3-204ENST00000559002 USP48Q86UV5 1035 aa7.86□□□□□ -1.15
CHRNA3-204ENST00000559002 CRACR2BQ8N4Y2 399 aaPredicted RBP7.86□□□□□ -1.15
CHRNA3-204ENST00000559002 ZNF784Q8NCA9 323 aaPredicted RBP7.86□□□□□ -1.15
CHRNA3-204ENST00000559002 HOOK2Q96ED9 719 aa7.86□□□□□ -1.15
CHRNA3-204ENST00000559002 CSRNP1Q96S65 589 aa7.86□□□□□ -1.15
CHRNA3-204ENST00000559002 GLIS2Q9BZE0 524 aaPredicted RBP7.86□□□□□ -1.15
CHRNA3-204ENST00000559002 LSG1Q9H089 658 aaKnown RBP7.86□□□□□ -1.15
CHRNA3-204ENST00000559002 UPF2Q9HAU5 1272 aaKnown RBP7.86□□□□□ -1.15
CHRNA3-204ENST00000559002 PGAP2Q9UHJ9 254 aa7.86□□□□□ -1.15
CHRNA3-204ENST00000559002 PALD1Q9ULE6 856 aa7.86□□□□□ -1.15
CHRNA3-204ENST00000559002 SCAF8Q9UPN6 1271 aaKnown RBP7.86□□□□□ -1.15
CHRNA3-204ENST00000559002 COL2A1P02458 1487 aaPredicted RBP7.86□□□□□ -1.15
CHRNA3-204ENST00000559002 MINDY4BA8MYZ0 360 aa7.85□□□□□ -1.15
CHRNA3-204ENST00000559002 FOXP2O15409 715 aa7.85□□□□□ -1.15
CHRNA3-204ENST00000559002 EPB41L2O43491 1005 aaKnown RBP7.85□□□□□ -1.15
CHRNA3-204ENST00000559002 SEC24BO95487 1268 aa7.85□□□□□ -1.15
CHRNA3-204ENST00000559002 FGAP02671 866 aa7.85□□□□□ -1.15
CHRNA3-204ENST00000559002 SUPT20HL1Q3ZLR7 823 aa7.85□□□□□ -1.15
CHRNA3-204ENST00000559002 SBK1Q52WX2 424 aa7.85□□□□□ -1.15
CHRNA3-204ENST00000559002 RNF20Q5VTR2 975 aa7.85□□□□□ -1.15
CHRNA3-204ENST00000559002 CTR9Q6PD62 1173 aa7.85□□□□□ -1.15
CHRNA3-204ENST00000559002 ZFPM1Q8IX07 1006 aa7.85□□□□□ -1.15
CHRNA3-204ENST00000559002 MAP4K1Q92918 833 aa7.85□□□□□ -1.15
CHRNA3-204ENST00000559002 MKRN1Q9UHC7 482 aaKnown RBP7.85□□□□□ -1.15
CHRNA3-204ENST00000559002 RBM8AQ9Y5S9 174 aaKnown RBP7.85□□□□□ -1.15
CHRNA3-204ENST00000559002 ATRNL1Q5VV63 1379 aa7.84□□□□□ -1.15
CHRNA3-204ENST00000559002 NAV1Q8NEY1 1877 aa7.84□□□□□ -1.15
CHRNA3-204ENST00000559002 CYP2D7A0A087X1C5 515 aa7.84□□□□□ -1.15
CHRNA3-204ENST00000559002 DDTLA6NHG4 134 aaPredicted RBP7.84□□□□□ -1.15
CHRNA3-204ENST00000559002 ZNF213O14771 459 aa7.84□□□□□ -1.15
CHRNA3-204ENST00000559002 KIF3CO14782 793 aa7.84□□□□□ -1.15
CHRNA3-204ENST00000559002 CYP2D6P10635 497 aa7.84□□□□□ -1.15
CHRNA3-204ENST00000559002 ZKSCAN1P17029 563 aaPredicted RBP7.84□□□□□ -1.15
CHRNA3-204ENST00000559002 HAND2P61296 217 aa7.84□□□□□ -1.15
CHRNA3-204ENST00000559002 PPARAQ07869 468 aa7.84□□□□□ -1.15
CHRNA3-204ENST00000559002 C12orf60Q5U649 245 aa7.84□□□□□ -1.15
CHRNA3-204ENST00000559002 PRAMEF18Q5VWM3 479 aa7.84□□□□□ -1.15
CHRNA3-204ENST00000559002 DCAF15Q66K64 600 aa7.84□□□□□ -1.15
CHRNA3-204ENST00000559002 SH3BP5LQ7L8J4 393 aa7.84□□□□□ -1.15
CHRNA3-204ENST00000559002 STK11IPQ8N1F8 1099 aa7.84□□□□□ -1.15
CHRNA3-204ENST00000559002 SMC1BQ8NDV3 1235 aa7.84□□□□□ -1.15
CHRNA3-204ENST00000559002 CDCA5Q96FF9 252 aa7.84□□□□□ -1.15
CHRNA3-204ENST00000559002 EHD4Q9H223 541 aa7.84□□□□□ -1.15
CHRNA3-204ENST00000559002 ZNF287Q9HBT7 754 aa7.84□□□□□ -1.15
CHRNA3-204ENST00000559002 TOMM22Q9NS69 142 aa7.84□□□□□ -1.15
CHRNA3-204ENST00000559002 PI4KBQ9UBF8 816 aa7.84□□□□□ -1.15
CHRNA3-204ENST00000559002 SERPINB13Q9UIV8 391 aa7.84□□□□□ -1.15
CHRNA3-204ENST00000559002 ECM29Q5VYK3 1845 aa7.84□□□□□ -1.15
CHRNA3-204ENST00000559002 SLC27A2O14975 620 aa7.83□□□□□ -1.16
CHRNA3-204ENST00000559002 TOMM70O94826 608 aa7.83□□□□□ -1.16
CHRNA3-204ENST00000559002 PLCD1P51178 756 aa7.83□□□□□ -1.16
CHRNA3-204ENST00000559002 CTDSPL2Q05D32 466 aa7.83□□□□□ -1.16
CHRNA3-204ENST00000559002 PDE4BQ07343 736 aa7.83□□□□□ -1.16
CHRNA3-204ENST00000559002 TTLL12Q14166 644 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms