RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 EPS15P42566 896 aa21.52■■□□□ 1.03
CLPX-203ENST00000558958 NFIAQ12857 509 aa21.52■■□□□ 1.03
CLPX-203ENST00000558958 NBPF9Q3BBW0 867 aa21.52■■□□□ 1.03
CLPX-203ENST00000558958 SPDYE2Q495Y8 402 aa21.52■■□□□ 1.03
CLPX-203ENST00000558958 TBC1D10BQ4KMP7 808 aaPredicted RBP21.52■■□□□ 1.03
CLPX-203ENST00000558958 SBK1Q52WX2 424 aa21.52■■□□□ 1.03
CLPX-203ENST00000558958 RBM26Q5T8P6 1007 aaKnown RBP21.52■■□□□ 1.03
CLPX-203ENST00000558958 MCM9Q9NXL9 1143 aa21.52■■□□□ 1.03
CLPX-203ENST00000558958 ZNF70Q9UC06 446 aaPredicted RBP21.52■■□□□ 1.03
CLPX-203ENST00000558958 ECM29Q5VYK3 1845 aa21.51■■□□□ 1.03
CLPX-203ENST00000558958 CACNB3P54284 484 aa21.51■■□□□ 1.03
CLPX-203ENST00000558958 HAND2P61296 217 aa21.51■■□□□ 1.03
CLPX-203ENST00000558958 PICALMQ13492 652 aa21.51■■□□□ 1.03
CLPX-203ENST00000558958 KIF4BQ2VIQ3 1234 aa21.51■■□□□ 1.03
CLPX-203ENST00000558958 ARPP21Q9UBL0 812 aaPredicted RBP21.51■■□□□ 1.03
CLPX-203ENST00000558958 FOCADQ5VW36 1801 aa21.5■■□□□ 1.03
CLPX-203ENST00000558958 BAZ2AQ9UIF9 1905 aaKnown RBP21.5■■□□□ 1.03
CLPX-203ENST00000558958 MYO1BO43795 1136 aa21.5■■□□□ 1.03
CLPX-203ENST00000558958 LMOD1P29536 600 aaPredicted RBP21.5■■□□□ 1.03
CLPX-203ENST00000558958 NBPF3Q9H094 633 aa21.5■■□□□ 1.03
CLPX-203ENST00000558958 TMOD2Q9NZR1 351 aa21.5■■□□□ 1.03
CLPX-203ENST00000558958 FAM198AQ9UFP1 575 aa21.5■■□□□ 1.03
CLPX-203ENST00000558958 ANAPC4Q9UJX5 808 aa21.5■■□□□ 1.03
CLPX-203ENST00000558958 CYP2D7A0A087X1C5 515 aa21.49■■□□□ 1.03
CLPX-203ENST00000558958 CLRN2A0PK11 232 aa21.49■■□□□ 1.03
CLPX-203ENST00000558958 MINDY4BA8MYZ0 360 aa21.49■■□□□ 1.03
CLPX-203ENST00000558958 PPARAQ07869 468 aa21.49■■□□□ 1.03
CLPX-203ENST00000558958 OSBPL5Q9H0X9 879 aaPredicted RBP21.49■■□□□ 1.03
CLPX-203ENST00000558958 SAP30BPQ9UHR5 308 aaKnown RBP21.49■■□□□ 1.03
CLPX-203ENST00000558958 NAV1Q8NEY1 1877 aa21.48■■□□□ 1.03
CLPX-203ENST00000558958 CYP2D6P10635 497 aa21.48■■□□□ 1.03
CLPX-203ENST00000558958 KRT32Q14532 448 aa21.48■■□□□ 1.03
CLPX-203ENST00000558958 ADCK5Q3MIX3 580 aa21.48■■□□□ 1.03
CLPX-203ENST00000558958 C12orf60Q5U649 245 aa21.48■■□□□ 1.03
CLPX-203ENST00000558958 FKBP1CQ5VVH2 108 aa21.48■■□□□ 1.03
CLPX-203ENST00000558958 TRPM4Q8TD43 1214 aa21.48■■□□□ 1.03
CLPX-203ENST00000558958 RBM19Q9Y4C8 960 aaKnown RBP21.48■■□□□ 1.03
CLPX-203ENST00000558958 LAMA4Q16363 1823 aa21.47■■□□□ 1.03
CLPX-203ENST00000558958 DDX60LQ5H9U9 1706 aaKnown RBP21.47■■□□□ 1.03
CLPX-203ENST00000558958 E7EWF7 191 aa21.47■■□□□ 1.03
CLPX-203ENST00000558958 ENTPD3O75355 529 aa21.47■■□□□ 1.03
CLPX-203ENST00000558958 CTDSPL2Q05D32 466 aa21.47■■□□□ 1.03
CLPX-203ENST00000558958 STOX1Q6ZVD7 989 aa21.47■■□□□ 1.03
CLPX-203ENST00000558958 TBC1D10CQ8IV04 446 aa21.47■■□□□ 1.03
CLPX-203ENST00000558958 ADARB2Q9NS39 739 aaKnown RBP21.47■■□□□ 1.03
CLPX-203ENST00000558958 SMIM22K7EJ46 135 aa21.46■■□□□ 1.03
CLPX-203ENST00000558958 POLR3DP05423 398 aaPredicted RBP21.46■■□□□ 1.03
CLPX-203ENST00000558958 TCP10Q12799 353 aa21.46■■□□□ 1.03
CLPX-203ENST00000558958 ZFPM1Q8IX07 1006 aa21.46■■□□□ 1.03
CLPX-203ENST00000558958 AMOTL1Q8IY63 956 aa21.46■■□□□ 1.03
CLPX-203ENST00000558958 TM6SF1Q9BZW5 370 aa21.46■■□□□ 1.03
CLPX-203ENST00000558958 TCP10L2B9ZVM9 353 aa21.45■■□□□ 1.03
CLPX-203ENST00000558958 HIRAP54198 1017 aaPredicted RBP21.45■■□□□ 1.03
CLPX-203ENST00000558958 EVX2Q03828 476 aa21.45■■□□□ 1.03
CLPX-203ENST00000558958 JAKMIP1Q96N16 626 aaKnown RBP21.45■■□□□ 1.03
CLPX-203ENST00000558958 VEZTQ9HBM0 779 aa21.45■■□□□ 1.03
CLPX-203ENST00000558958 HACL1Q9UJ83 578 aa21.45■■□□□ 1.03
CLPX-203ENST00000558958 PLCD1P51178 756 aa21.45■■□□□ 1.02
CLPX-203ENST00000558958 RABEP1Q15276 862 aa21.45■■□□□ 1.02
CLPX-203ENST00000558958 SLC4A8Q2Y0W8 1093 aa21.45■■□□□ 1.02
CLPX-203ENST00000558958 AKNAD1Q5T1N1 836 aa21.45■■□□□ 1.02
CLPX-203ENST00000558958 STAG1Q8WVM7 1258 aa21.45■■□□□ 1.02
CLPX-203ENST00000558958 TACC3Q9Y6A5 838 aa21.45■■□□□ 1.02
CLPX-203ENST00000558958 ASTN2O75129 1339 aaPredicted RBP21.44■■□□□ 1.02
CLPX-203ENST00000558958 MYH1P12882 1939 aa21.44■■□□□ 1.02
CLPX-203ENST00000558958 CNTNAP1P78357 1384 aa21.44■■□□□ 1.02
CLPX-203ENST00000558958 ROBO3Q96MS0 1386 aa21.44■■□□□ 1.02
CLPX-203ENST00000558958 PSMA5P28066 241 aa21.44■■□□□ 1.02
CLPX-203ENST00000558958 TTC6Q86TZ1 520 aa21.44■■□□□ 1.02
CLPX-203ENST00000558958 FAM83AQ86UY5 434 aa21.44■■□□□ 1.02
CLPX-203ENST00000558958 FAM151AQ8WW52 585 aa21.44■■□□□ 1.02
CLPX-203ENST00000558958 NEK1Q96PY6 1258 aa21.44■■□□□ 1.02
CLPX-203ENST00000558958 DHX36Q9H2U1 1008 aaKnown RBP21.44■■□□□ 1.02
CLPX-203ENST00000558958 COL2A1P02458 1487 aaPredicted RBP21.44■■□□□ 1.02
CLPX-203ENST00000558958 LAMB1P07942 1786 aa21.43■■□□□ 1.02
CLPX-203ENST00000558958 POTECB2RU33 542 aa21.43■■□□□ 1.02
CLPX-203ENST00000558958 SLC3A2P08195 630 aaKnown RBP21.43■■□□□ 1.02
CLPX-203ENST00000558958 FGRP09769 529 aa21.43■■□□□ 1.02
CLPX-203ENST00000558958 CASTP20810 708 aaKnown RBP21.43■■□□□ 1.02
CLPX-203ENST00000558958 MFSD6Q6ZSS7 791 aa21.43■■□□□ 1.02
CLPX-203ENST00000558958 SH3BP5LQ7L8J4 393 aa21.43■■□□□ 1.02
CLPX-203ENST00000558958 RNF41Q9H4P4 317 aaPredicted RBP21.43■■□□□ 1.02
CLPX-203ENST00000558958 ZSWIM6Q9HCJ5 1215 aa21.43■■□□□ 1.02
CLPX-203ENST00000558958 INCENPQ9NQS7 918 aa21.43■■□□□ 1.02
CLPX-203ENST00000558958 ATRNL1Q5VV63 1379 aa21.43■■□□□ 1.02
CLPX-203ENST00000558958 WDR90Q96KV7 1748 aa21.42■■□□□ 1.02
CLPX-203ENST00000558958 IQCA1LA6NCM1 817 aa21.42■■□□□ 1.02
CLPX-203ENST00000558958 DDTLA6NHG4 134 aaPredicted RBP21.42■■□□□ 1.02
CLPX-203ENST00000558958 PCP11498 1178 aaKnown RBP21.42■■□□□ 1.02
CLPX-203ENST00000558958 EPHX2P34913 555 aa21.42■■□□□ 1.02
CLPX-203ENST00000558958 COL9A3Q14050 684 aaPredicted RBP21.42■■□□□ 1.02
CLPX-203ENST00000558958 HLA-DOAP06340 250 aa21.41■■□□□ 1.02
CLPX-203ENST00000558958 TNNI2P48788 182 aa21.41■■□□□ 1.02
CLPX-203ENST00000558958 TNFAIP1Q13829 316 aa21.41■■□□□ 1.02
CLPX-203ENST00000558958 ANGEL2Q5VTE6 544 aaKnown RBP21.41■■□□□ 1.02
CLPX-203ENST00000558958 USP50Q70EL3 339 aaPredicted RBP21.41■■□□□ 1.02
CLPX-203ENST00000558958 STK11IPQ8N1F8 1099 aa21.41■■□□□ 1.02
CLPX-203ENST00000558958 NCOA7Q8NI08 942 aa21.41■■□□□ 1.02
CLPX-203ENST00000558958 DYNLL2Q96FJ2 89 aa21.41■■□□□ 1.02
CLPX-203ENST00000558958 UPF3BQ9BZI7 483 aaKnown RBP21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms