RNA–Protein interactions for RNA: ENST00000558937.1

SMAD6-203, Transcript of SMAD family member 6, humanhuman

TSL 5

Gene SMAD6, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-203ENST00000558937 CEP85Q6P2H3 762 aa18.57■□□□□ 0.56
SMAD6-203ENST00000558937 SH3BP5LQ7L8J4 393 aa18.57■□□□□ 0.56
SMAD6-203ENST00000558937 CD99L2Q8TCZ2 262 aa18.57■□□□□ 0.56
SMAD6-203ENST00000558937 NSUN4Q96CB9 384 aaKnown RBP18.57■□□□□ 0.56
SMAD6-203ENST00000558937 ERO1AQ96HE7 468 aa18.57■□□□□ 0.56
SMAD6-203ENST00000558937 RAI14Q9P0K7 980 aa18.57■□□□□ 0.56
SMAD6-203ENST00000558937 TRIM17Q9Y577 477 aa18.57■□□□□ 0.56
SMAD6-203ENST00000558937 LDHCP07864 332 aa18.56■□□□□ 0.56
SMAD6-203ENST00000558937 GSTO1P78417 241 aa18.56■□□□□ 0.56
SMAD6-203ENST00000558937 OTOP1Q7RTM1 612 aa18.56■□□□□ 0.56
SMAD6-203ENST00000558937 ZSCAN29Q8IWY8 852 aaPredicted RBP18.56■□□□□ 0.56
SMAD6-203ENST00000558937 ZFYVE28Q9HCC9 887 aa18.56■□□□□ 0.56
SMAD6-203ENST00000558937 SNRKQ9NRH2 765 aa18.56■□□□□ 0.56
SMAD6-203ENST00000558937 MYO5AQ9Y4I1 1855 aaKnown RBP18.56■□□□□ 0.56
SMAD6-203ENST00000558937 DOCK1Q14185 1865 aa18.55■□□□□ 0.56
SMAD6-203ENST00000558937 DDTLA6NHG4 134 aaPredicted RBP18.55■□□□□ 0.56
SMAD6-203ENST00000558937 BTBD19C9JJ37 291 aa18.55■□□□□ 0.56
SMAD6-203ENST00000558937 SP3Q02447 781 aa18.55■□□□□ 0.56
SMAD6-203ENST00000558937 CCDC158Q5M9N0 1113 aa18.55■□□□□ 0.56
SMAD6-203ENST00000558937 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.55■□□□□ 0.56
SMAD6-203ENST00000558937 SLURP2P0DP57 97 aa18.54■□□□□ 0.56
SMAD6-203ENST00000558937 MS4A1P11836 297 aa18.54■□□□□ 0.56
SMAD6-203ENST00000558937 CAP1Q01518 475 aa18.54■□□□□ 0.56
SMAD6-203ENST00000558937 ZCCHC17Q9NP64 241 aaKnown RBP18.54■□□□□ 0.56
SMAD6-203ENST00000558937 TLR7Q9NYK1 1049 aaKnown RBP18.54■□□□□ 0.56
SMAD6-203ENST00000558937 LRP2BPQ9P2M1 347 aa18.54■□□□□ 0.56
SMAD6-203ENST00000558937 DBNLQ9UJU6 430 aaKnown RBP18.54■□□□□ 0.56
SMAD6-203ENST00000558937 KCNH4Q9UQ05 1017 aa18.54■□□□□ 0.56
SMAD6-203ENST00000558937 PHF20L1A8MW92 1017 aa18.53■□□□□ 0.56
SMAD6-203ENST00000558937 EAF2Q96CJ1 260 aaPredicted RBP18.53■□□□□ 0.56
SMAD6-203ENST00000558937 CCDC8Q9H0W5 538 aaPredicted RBP18.53■□□□□ 0.56
SMAD6-203ENST00000558937 COL2A1P02458 1487 aaPredicted RBP18.52■□□□□ 0.56
SMAD6-203ENST00000558937 ZSWIM8A7E2V4 1837 aa18.52■□□□□ 0.56
SMAD6-203ENST00000558937 NPM3O75607 178 aaKnown RBP18.52■□□□□ 0.56
SMAD6-203ENST00000558937 MAP4K4O95819 1239 aaPredicted RBP18.52■□□□□ 0.56
SMAD6-203ENST00000558937 MAP3K10Q02779 954 aa18.52■□□□□ 0.56
SMAD6-203ENST00000558937 SCYL3Q8IZE3 742 aa18.52■□□□□ 0.56
SMAD6-203ENST00000558937 ZNF512BQ96KM6 892 aaPredicted RBP18.52■□□□□ 0.56
SMAD6-203ENST00000558937 EFCC1Q9HA90 598 aa18.52■□□□□ 0.56
SMAD6-203ENST00000558937 EXOC6BQ9Y2D4 811 aa18.52■□□□□ 0.56
SMAD6-203ENST00000558937 CDK5RAP2Q96SN8 1893 aa18.52■□□□□ 0.55
SMAD6-203ENST00000558937 PHIPQ8WWQ0 1821 aa18.51■□□□□ 0.55
SMAD6-203ENST00000558937 CYP2E1P05181 493 aaPredicted RBP18.51■□□□□ 0.55
SMAD6-203ENST00000558937 ZAP70P43403 619 aa18.51■□□□□ 0.55
SMAD6-203ENST00000558937 PTPRFP10586 1907 aa18.51■□□□□ 0.55
SMAD6-203ENST00000558937 TLR2O60603 784 aa18.5■□□□□ 0.55
SMAD6-203ENST00000558937 MOGSQ13724 837 aa18.5■□□□□ 0.55
SMAD6-203ENST00000558937 NAA16Q6N069 864 aaPredicted RBP18.5■□□□□ 0.55
SMAD6-203ENST00000558937 ANKRD23Q86SG2 305 aa18.5■□□□□ 0.55
SMAD6-203ENST00000558937 TEX11Q8IYF3 940 aa18.5■□□□□ 0.55
SMAD6-203ENST00000558937 NOL10Q9BSC4 688 aaKnown RBP18.5■□□□□ 0.55
SMAD6-203ENST00000558937 OSBPL5Q9H0X9 879 aaPredicted RBP18.5■□□□□ 0.55
SMAD6-203ENST00000558937 PIH1D3Q9NQM4 214 aaKnown RBP18.5■□□□□ 0.55
SMAD6-203ENST00000558937 RCAN3Q9UKA8 241 aa18.5■□□□□ 0.55
SMAD6-203ENST00000558937 PTPN22Q9Y2R2 807 aa18.5■□□□□ 0.55
SMAD6-203ENST00000558937 COG6Q9Y2V7 657 aa18.5■□□□□ 0.55
SMAD6-203ENST00000558937 FOCADQ5VW36 1801 aa18.5■□□□□ 0.55
SMAD6-203ENST00000558937 SIPA1L1O43166 1804 aa18.49■□□□□ 0.55
SMAD6-203ENST00000558937 ERC1Q8IUD2 1116 aa18.49■□□□□ 0.55
SMAD6-203ENST00000558937 SH3RF3Q8TEJ3 882 aaPredicted RBP18.49■□□□□ 0.55
SMAD6-203ENST00000558937 PICK1Q9NRD5 415 aa18.49■□□□□ 0.55
SMAD6-203ENST00000558937 AATFQ9NY61 560 aaKnown RBP eCLIP18.49■□□□□ 0.55
SMAD6-203ENST00000558937 DDX19BQ9UMR2 479 aa18.49■□□□□ 0.55
SMAD6-203ENST00000558937 ATAD5Q96QE3 1844 aa18.49■□□□□ 0.55
SMAD6-203ENST00000558937 FAM196BA6NMK8 535 aa18.48■□□□□ 0.55
SMAD6-203ENST00000558937 CXCL11O14625 94 aa18.48■□□□□ 0.55
SMAD6-203ENST00000558937 TBC1D12O60347 775 aa18.48■□□□□ 0.55
SMAD6-203ENST00000558937 PTPRAP18433 802 aa18.48■□□□□ 0.55
SMAD6-203ENST00000558937 ADGRA1Q86SQ6 560 aa18.48■□□□□ 0.55
SMAD6-203ENST00000558937 AACSQ86V21 672 aa18.48■□□□□ 0.55
SMAD6-203ENST00000558937 ZHX2Q9Y6X8 837 aa18.48■□□□□ 0.55
SMAD6-203ENST00000558937 ADGRA2Q96PE1 1338 aa18.48■□□□□ 0.55
SMAD6-203ENST00000558937 PDHXO00330 501 aa18.47■□□□□ 0.55
SMAD6-203ENST00000558937 CTNND1O60716 968 aaKnown RBP18.47■□□□□ 0.55
SMAD6-203ENST00000558937 BAG3O95817 575 aa18.47■□□□□ 0.55
SMAD6-203ENST00000558937 PPP4CP60510 307 aa18.47■□□□□ 0.55
SMAD6-203ENST00000558937 HSP90AB4PQ58FF6 505 aa18.47■□□□□ 0.55
SMAD6-203ENST00000558937 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.47■□□□□ 0.55
SMAD6-203ENST00000558937 A0A0G2JLL6 359 aaPredicted RBP18.46■□□□□ 0.55
SMAD6-203ENST00000558937 IGSF3O75054 1194 aa18.46■□□□□ 0.55
SMAD6-203ENST00000558937 PLCG2P16885 1265 aa18.46■□□□□ 0.55
SMAD6-203ENST00000558937 ARHGEF6Q15052 776 aa18.46■□□□□ 0.55
SMAD6-203ENST00000558937 GPAT2Q6NUI2 795 aa18.46■□□□□ 0.55
SMAD6-203ENST00000558937 C17orf99Q6UX52 265 aa18.46■□□□□ 0.55
SMAD6-203ENST00000558937 PRRT2Q7Z6L0 340 aaPredicted RBP18.46■□□□□ 0.55
SMAD6-203ENST00000558937 CCDC84Q86UT8 332 aaPredicted RBP18.46■□□□□ 0.55
SMAD6-203ENST00000558937 RPAP2Q8IXW5 612 aaPredicted RBP18.46■□□□□ 0.55
SMAD6-203ENST00000558937 RHPN1Q8TCX5 695 aa18.46■□□□□ 0.55
SMAD6-203ENST00000558937 ARHGAP39Q9C0H5 1083 aa18.46■□□□□ 0.55
SMAD6-203ENST00000558937 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.46■□□□□ 0.55
SMAD6-203ENST00000558937 IL1RAPL2Q9NP60 686 aa18.46■□□□□ 0.55
SMAD6-203ENST00000558937 ZBTB40Q9NUA8 1239 aa18.46■□□□□ 0.55
SMAD6-203ENST00000558937 CPA4Q9UI42 421 aa18.46■□□□□ 0.55
SMAD6-203ENST00000558937 AFG3L2Q9Y4W6 797 aa18.46■□□□□ 0.55
SMAD6-203ENST00000558937 NDUFB9Q9Y6M9 179 aa18.46■□□□□ 0.55
SMAD6-203ENST00000558937 RBBP6Q7Z6E9 1792 aaKnown RBP18.45■□□□□ 0.54
SMAD6-203ENST00000558937 LACTBP83111 547 aaPredicted RBP18.45■□□□□ 0.54
SMAD6-203ENST00000558937 SIRT2Q8IXJ6 389 aa18.45■□□□□ 0.54
SMAD6-203ENST00000558937 FLT1P17948 1338 aa18.45■□□□□ 0.54
SMAD6-203ENST00000558937 HMMRO75330 724 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms