RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 ZNF157P51786 506 aaPredicted RBP6.92□□□□□ -1.3
CASC4-206ENST00000558847 AP3B2Q13367 1082 aa6.92□□□□□ -1.3
CASC4-206ENST00000558847 POU4F3Q15319 338 aa6.92□□□□□ -1.3
CASC4-206ENST00000558847 PDZD3Q86UT5 571 aa6.92□□□□□ -1.3
CASC4-206ENST00000558847 STK35Q8TDR2 534 aa6.92□□□□□ -1.3
CASC4-206ENST00000558847 NECAB3Q96P71 396 aaPredicted RBP6.92□□□□□ -1.3
CASC4-206ENST00000558847 SUGCTQ9HAC7 445 aa6.92□□□□□ -1.3
CASC4-206ENST00000558847 TMEM39AQ9NV64 488 aa6.92□□□□□ -1.3
CASC4-206ENST00000558847 FAM95CA0A1B0GW59 222 aa6.91□□□□□ -1.3
CASC4-206ENST00000558847 TIAF1O95411 115 aa6.91□□□□□ -1.3
CASC4-206ENST00000558847 CYP11A1P05108 521 aa6.91□□□□□ -1.3
CASC4-206ENST00000558847 RAD51AP2Q09MP3 1159 aa6.91□□□□□ -1.3
CASC4-206ENST00000558847 C9orf131Q5VYM1 1079 aa6.91□□□□□ -1.3
CASC4-206ENST00000558847 PAOXQ6QHF9 649 aa6.91□□□□□ -1.3
CASC4-206ENST00000558847 TPTE2Q6XPS3 522 aa6.91□□□□□ -1.3
CASC4-206ENST00000558847 SLC43A3Q8NBI5 491 aa6.91□□□□□ -1.3
CASC4-206ENST00000558847 DDX54Q8TDD1 881 aaKnown RBP6.91□□□□□ -1.3
CASC4-206ENST00000558847 FMNL2Q96PY5 1086 aa6.91□□□□□ -1.3
CASC4-206ENST00000558847 CEP44Q9C0F1 390 aa6.91□□□□□ -1.3
CASC4-206ENST00000558847 GGT7Q9UJ14 662 aa6.91□□□□□ -1.3
CASC4-206ENST00000558847 TTF2Q9UNY4 1162 aaKnown RBP6.91□□□□□ -1.3
CASC4-206ENST00000558847 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.91□□□□□ -1.3
CASC4-206ENST00000558847 PAGE1O75459 146 aa6.9□□□□□ -1.3
CASC4-206ENST00000558847 CELA3AP09093 270 aa6.9□□□□□ -1.3
CASC4-206ENST00000558847 DRD2P14416 443 aa6.9□□□□□ -1.3
CASC4-206ENST00000558847 YBX3P16989 372 aaKnown RBP eCLIP6.9□□□□□ -1.3
CASC4-206ENST00000558847 USP48Q86UV5 1035 aa6.9□□□□□ -1.3
CASC4-206ENST00000558847 SULF2Q8IWU5 870 aa6.9□□□□□ -1.3
CASC4-206ENST00000558847 SMG8Q8ND04 991 aaKnown RBP6.9□□□□□ -1.3
CASC4-206ENST00000558847 CORO1BQ9BR76 489 aa6.9□□□□□ -1.3
CASC4-206ENST00000558847 IGSF3O75054 1194 aa6.89□□□□□ -1.31
CASC4-206ENST00000558847 F13BP05160 661 aa6.89□□□□□ -1.31
CASC4-206ENST00000558847 PPP2R3AQ06190 1150 aa6.89□□□□□ -1.31
CASC4-206ENST00000558847 EXOSC6Q5RKV6 272 aaKnown RBP6.89□□□□□ -1.31
CASC4-206ENST00000558847 RASIP1Q5U651 963 aa6.89□□□□□ -1.31
CASC4-206ENST00000558847 FBLIM1Q8WUP2 373 aa6.89□□□□□ -1.31
CASC4-206ENST00000558847 YIPF2Q9BWQ6 316 aa6.89□□□□□ -1.31
CASC4-206ENST00000558847 DDX41Q9UJV9 622 aaKnown RBP6.89□□□□□ -1.31
CASC4-206ENST00000558847 GSTP1P09211 210 aaKnown RBP6.88□□□□□ -1.31
CASC4-206ENST00000558847 NME2P22392 152 aa6.88□□□□□ -1.31
CASC4-206ENST00000558847 ZNF252P-AS1Q0IIN9 211 aa6.88□□□□□ -1.31
CASC4-206ENST00000558847 MEI1Q5TIA1 1274 aa6.88□□□□□ -1.31
CASC4-206ENST00000558847 SV2BQ7L1I2 683 aa6.88□□□□□ -1.31
CASC4-206ENST00000558847 VPS37DQ86XT2 251 aa6.88□□□□□ -1.31
CASC4-206ENST00000558847 UBXN4Q92575 508 aa6.88□□□□□ -1.31
CASC4-206ENST00000558847 TBC1D32Q96NH3 1257 aa6.88□□□□□ -1.31
CASC4-206ENST00000558847 CCDC86Q9H6F5 360 aaKnown RBP6.88□□□□□ -1.31
CASC4-206ENST00000558847 ADH5P11766 374 aa6.87□□□□□ -1.31
CASC4-206ENST00000558847 FOSL1P15407 271 aa6.87□□□□□ -1.31
CASC4-206ENST00000558847 CCDC85BQ15834 202 aaPredicted RBP6.87□□□□□ -1.31
CASC4-206ENST00000558847 HP1BP3Q5SSJ5 553 aaPredicted RBP6.87□□□□□ -1.31
CASC4-206ENST00000558847 DIEXFQ68CQ4 756 aaKnown RBP6.87□□□□□ -1.31
CASC4-206ENST00000558847 CDPF1Q6NVV7 123 aa6.87□□□□□ -1.31
CASC4-206ENST00000558847 ERMP1Q7Z2K6 904 aa6.87□□□□□ -1.31
CASC4-206ENST00000558847 RELL1Q8IUW5 271 aa6.87□□□□□ -1.31
CASC4-206ENST00000558847 C2CD4AQ8NCU7 369 aaPredicted RBP6.87□□□□□ -1.31
CASC4-206ENST00000558847 SPATA32Q96LK8 384 aa6.87□□□□□ -1.31
CASC4-206ENST00000558847 METTL22Q9BUU2 404 aaPredicted RBP6.87□□□□□ -1.31
CASC4-206ENST00000558847 RSRP1Q9BUV0 290 aa6.87□□□□□ -1.31
CASC4-206ENST00000558847 WDR18Q9BV38 432 aa6.87□□□□□ -1.31
CASC4-206ENST00000558847 CAPN10Q9HC96 672 aa6.87□□□□□ -1.31
CASC4-206ENST00000558847 KRT82Q9NSB4 513 aa6.87□□□□□ -1.31
CASC4-206ENST00000558847 CACNA2D2Q9NY47 1150 aa6.87□□□□□ -1.31
CASC4-206ENST00000558847 INPP5FQ9Y2H2 1132 aa6.87□□□□□ -1.31
CASC4-206ENST00000558847 PCDHGC5Q9Y5F6 944 aa6.87□□□□□ -1.31
CASC4-206ENST00000558847 CYP26A1O43174 497 aa6.86□□□□□ -1.31
CASC4-206ENST00000558847 ZNF862O60290 1169 aa6.86□□□□□ -1.31
CASC4-206ENST00000558847 BMP6P22004 513 aa6.86□□□□□ -1.31
CASC4-206ENST00000558847 ARNTP27540 789 aa6.86□□□□□ -1.31
CASC4-206ENST00000558847 CPSF6Q16630 551 aaKnown RBP eCLIP6.86□□□□□ -1.311e-6■■■■□ 25
CASC4-206ENST00000558847 TP53INP2Q8IXH6 220 aa6.86□□□□□ -1.31
CASC4-206ENST00000558847 ABI1Q8IZP0 508 aa6.86□□□□□ -1.31
CASC4-206ENST00000558847 WDR89Q96FK6 387 aaPredicted RBP6.86□□□□□ -1.31
CASC4-206ENST00000558847 TINF2Q9BSI4 451 aa6.86□□□□□ -1.31
CASC4-206ENST00000558847 ADGRE2Q9UHX3 823 aa6.86□□□□□ -1.31
CASC4-206ENST00000558847 SYNGAP1Q96PV0 1343 aa6.85□□□□□ -1.31
CASC4-206ENST00000558847 AOC2O75106 756 aa6.85□□□□□ -1.31
CASC4-206ENST00000558847 RAB6AP20340 208 aa6.85□□□□□ -1.31
CASC4-206ENST00000558847 SOX4Q06945 474 aaPredicted RBP6.85□□□□□ -1.31
CASC4-206ENST00000558847 PDE3AQ14432 1141 aa6.85□□□□□ -1.31
CASC4-206ENST00000558847 KIF4BQ2VIQ3 1234 aa6.85□□□□□ -1.31
CASC4-206ENST00000558847 PCNX4Q63HM2 1172 aa6.85□□□□□ -1.31
CASC4-206ENST00000558847 SHISA5Q8N114 240 aa6.85□□□□□ -1.31
CASC4-206ENST00000558847 ARMC5Q96C12 935 aa6.85□□□□□ -1.31
CASC4-206ENST00000558847 ZC3H12CQ9C0D7 883 aaKnown RBP6.85□□□□□ -1.31
CASC4-206ENST00000558847 RAD18Q9NS91 495 aa6.85□□□□□ -1.31
CASC4-206ENST00000558847 CCDC39Q9UFE4 941 aa6.85□□□□□ -1.31
CASC4-206ENST00000558847 SAMM50Q9Y512 469 aa6.85□□□□□ -1.31
CASC4-206ENST00000558847 GRIN3AQ8TCU5 1115 aa6.84□□□□□ -1.31
CASC4-206ENST00000558847 KRTAP9-9Q9BYP9 154 aa6.84□□□□□ -1.31
CASC4-206ENST00000558847 KRTAP9-4Q9BYQ2 154 aa6.84□□□□□ -1.31
CASC4-206ENST00000558847 TANGO6Q9C0B7 1094 aa6.84□□□□□ -1.31
CASC4-206ENST00000558847 ACBD3Q9H3P7 528 aa6.84□□□□□ -1.31
CASC4-206ENST00000558847 GSX1Q9H4S2 264 aaPredicted RBP6.84□□□□□ -1.31
CASC4-206ENST00000558847 TMPRSS2O15393 492 aa6.83□□□□□ -1.32
CASC4-206ENST00000558847 LIG1P18858 919 aa6.83□□□□□ -1.32
CASC4-206ENST00000558847 ADMP35318 185 aa6.83□□□□□ -1.32
CASC4-206ENST00000558847 ARID5AQ03989 594 aa6.83□□□□□ -1.32
CASC4-206ENST00000558847 MSMPQ1L6U9 139 aa6.83□□□□□ -1.32
CASC4-206ENST00000558847 ZNF394Q53GI3 561 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms