RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 CDK5RAP2Q96SN8 1893 aa15.26■□□□□ 0.03
SMAD3-207ENST00000558763 MAGEB6P1A0A0J9YX57 407 aa15.26■□□□□ 0.03
SMAD3-207ENST00000558763 GOLGA6L22H0YM25 854 aa15.26■□□□□ 0.03
SMAD3-207ENST00000558763 NIM1KQ8IY84 436 aa15.26■□□□□ 0.03
SMAD3-207ENST00000558763 HPS5Q9UPZ3 1129 aa15.26■□□□□ 0.03
SMAD3-207ENST00000558763 YDJCA8MPS7 323 aa15.25■□□□□ 0.03
SMAD3-207ENST00000558763 SMIM22K7EJ46 135 aa15.25■□□□□ 0.03
SMAD3-207ENST00000558763 FGD1P98174 961 aa15.25■□□□□ 0.03
SMAD3-207ENST00000558763 CTDSPL2Q05D32 466 aa15.25■□□□□ 0.03
SMAD3-207ENST00000558763 GRIK5Q16478 980 aa15.25■□□□□ 0.03
SMAD3-207ENST00000558763 KLHL40Q2TBA0 621 aa15.25■□□□□ 0.03
SMAD3-207ENST00000558763 RALYLQ86SE5 291 aaKnown RBP15.25■□□□□ 0.03
SMAD3-207ENST00000558763 VPS33BQ9H267 617 aa15.25■□□□□ 0.03
SMAD3-207ENST00000558763 MYH2Q9UKX2 1941 aa15.25■□□□□ 0.03
SMAD3-207ENST00000558763 B4E1Z4 1266 aa15.25■□□□□ 0.03
SMAD3-207ENST00000558763 SKOR2Q2VWA4 1001 aaPredicted RBP15.25■□□□□ 0.03
SMAD3-207ENST00000558763 CDC37L1Q7L3B6 337 aa15.25■□□□□ 0.03
SMAD3-207ENST00000558763 WDR66Q8TBY9 1149 aa15.25■□□□□ 0.03
SMAD3-207ENST00000558763 STAG1Q8WVM7 1258 aa15.25■□□□□ 0.03
SMAD3-207ENST00000558763 JDP2Q8WYK2 163 aa15.25■□□□□ 0.03
SMAD3-207ENST00000558763 LLPHQ9BRT6 129 aaKnown RBP15.25■□□□□ 0.03
SMAD3-207ENST00000558763 MXD3Q9BW11 206 aa15.25■□□□□ 0.03
SMAD3-207ENST00000558763 NCOA5Q9HCD5 579 aaKnown RBP15.25■□□□□ 0.03
SMAD3-207ENST00000558763 MYH15Q9Y2K3 1946 aa15.25■□□□□ 0.03
SMAD3-207ENST00000558763 ECM29Q5VYK3 1845 aa15.24■□□□□ 0.03
SMAD3-207ENST00000558763 SH2B2O14492 632 aaPredicted RBP15.24■□□□□ 0.03
SMAD3-207ENST00000558763 MFSD14BQ5SR56 506 aa15.24■□□□□ 0.03
SMAD3-207ENST00000558763 AKNAD1Q5T1N1 836 aa15.24■□□□□ 0.03
SMAD3-207ENST00000558763 GPT2Q8TD30 523 aa15.24■□□□□ 0.03
SMAD3-207ENST00000558763 ANAPC4Q9UJX5 808 aa15.24■□□□□ 0.03
SMAD3-207ENST00000558763 ZNF646O15015 1829 aaPredicted RBP15.24■□□□□ 0.03
SMAD3-207ENST00000558763 FAM205AQ6ZU69 1335 aa15.24■□□□□ 0.03
SMAD3-207ENST00000558763 PRPF40AO75400 957 aaKnown RBP15.24■□□□□ 0.03
SMAD3-207ENST00000558763 RAD17O75943 681 aa15.24■□□□□ 0.03
SMAD3-207ENST00000558763 TDO2P48775 406 aa15.24■□□□□ 0.03
SMAD3-207ENST00000558763 CCT2P78371 535 aaKnown RBP15.24■□□□□ 0.03
SMAD3-207ENST00000558763 LARP1BQ659C4 914 aaKnown RBP15.24■□□□□ 0.03
SMAD3-207ENST00000558763 TMED8Q6PL24 325 aaPredicted RBP15.24■□□□□ 0.03
SMAD3-207ENST00000558763 TMEM87AQ8NBN3 555 aa15.24■□□□□ 0.03
SMAD3-207ENST00000558763 IGDCC4Q8TDY8 1250 aa15.24■□□□□ 0.03
SMAD3-207ENST00000558763 NACAP1Q9BZK3 213 aa15.24■□□□□ 0.03
SMAD3-207ENST00000558763 GZF1Q9H116 711 aaPredicted RBP15.24■□□□□ 0.03
SMAD3-207ENST00000558763 SENP2Q9HC62 589 aa15.24■□□□□ 0.03
SMAD3-207ENST00000558763 ZNRF3Q9ULT6 936 aa15.23■□□□□ 0.03
SMAD3-207ENST00000558763 ANGEL1Q9UNK9 670 aaKnown RBP15.23■□□□□ 0.03
SMAD3-207ENST00000558763 DDX60LQ5H9U9 1706 aaKnown RBP15.23■□□□□ 0.03
SMAD3-207ENST00000558763 SBF1O95248 1867 aa15.22■□□□□ 0.03
SMAD3-207ENST00000558763 KLF18A0A0U1RQI7 1052 aa15.22■□□□□ 0.03
SMAD3-207ENST00000558763 PTPDC1A2A3K4 754 aa15.22■□□□□ 0.03
SMAD3-207ENST00000558763 USP17L3A6NCW0 530 aa15.22■□□□□ 0.03
SMAD3-207ENST00000558763 USP17L4A6NCW7 530 aa15.22■□□□□ 0.03
SMAD3-207ENST00000558763 IGSF3O75054 1194 aa15.22■□□□□ 0.03
SMAD3-207ENST00000558763 LMNB1P20700 586 aa15.22■□□□□ 0.03
SMAD3-207ENST00000558763 PDCP20941 246 aa15.22■□□□□ 0.03
SMAD3-207ENST00000558763 PPARAQ07869 468 aa15.22■□□□□ 0.03
SMAD3-207ENST00000558763 TRDNQ13061 729 aa15.22■□□□□ 0.03
SMAD3-207ENST00000558763 FOXD4L6Q3SYB3 417 aaPredicted RBP15.22■□□□□ 0.03
SMAD3-207ENST00000558763 FOXD4L3Q6VB84 417 aaPredicted RBP15.22■□□□□ 0.03
SMAD3-207ENST00000558763 USP17L1Q7RTZ2 530 aa15.22■□□□□ 0.03
SMAD3-207ENST00000558763 CERS5Q8N5B7 392 aa15.22■□□□□ 0.03
SMAD3-207ENST00000558763 PSME4Q14997 1843 aa15.22■□□□□ 0.03
SMAD3-207ENST00000558763 VPS37CA5D8V6 355 aaPredicted RBP15.22■□□□□ 0.03
SMAD3-207ENST00000558763 LDHBP07195 334 aaKnown RBP15.22■□□□□ 0.03
SMAD3-207ENST00000558763 PDIA4P13667 645 aaKnown RBP15.22■□□□□ 0.03
SMAD3-207ENST00000558763 DACT2Q5SW24 774 aa15.22■□□□□ 0.03
SMAD3-207ENST00000558763 STRIP1Q5VSL9 837 aa15.22■□□□□ 0.03
SMAD3-207ENST00000558763 GIMAP6Q6P9H5 292 aa15.22■□□□□ 0.03
SMAD3-207ENST00000558763 TBC1D22AQ8WUA7 517 aa15.22■□□□□ 0.03
SMAD3-207ENST00000558763 LY9Q9HBG7 655 aa15.22■□□□□ 0.03
SMAD3-207ENST00000558763 GDPD2Q9HCC8 539 aa15.22■□□□□ 0.03
SMAD3-207ENST00000558763 AATFQ9NY61 560 aaKnown RBP eCLIP15.22■□□□□ 0.03
SMAD3-207ENST00000558763 ZSWIM5Q9P217 1185 aa15.22■□□□□ 0.03
SMAD3-207ENST00000558763 DDX49Q9Y6V7 483 aaKnown RBP15.22■□□□□ 0.03
SMAD3-207ENST00000558763 NAV1Q8NEY1 1877 aa15.21■□□□□ 0.03
SMAD3-207ENST00000558763 FSD2A1L4K1 749 aa15.21■□□□□ 0.03
SMAD3-207ENST00000558763 F8W031 263 aaPredicted RBP15.21■□□□□ 0.03
SMAD3-207ENST00000558763 KDM4AO75164 1064 aa15.21■□□□□ 0.03
SMAD3-207ENST00000558763 FDPSP14324 419 aaKnown RBP15.21■□□□□ 0.03
SMAD3-207ENST00000558763 EVX2Q03828 476 aa15.21■□□□□ 0.03
SMAD3-207ENST00000558763 SGMS1Q86VZ5 419 aa15.21■□□□□ 0.03
SMAD3-207ENST00000558763 DZIP1Q86YF9 867 aaKnown RBP15.21■□□□□ 0.03
SMAD3-207ENST00000558763 DDX11Q96FC9 970 aa15.21■□□□□ 0.03
SMAD3-207ENST00000558763 TMEM87BQ96K49 555 aa15.21■□□□□ 0.03
SMAD3-207ENST00000558763 CNPY2Q9Y2B0 182 aa15.21■□□□□ 0.03
SMAD3-207ENST00000558763 CYP2D7A0A087X1C5 515 aa15.2■□□□□ 0.02
SMAD3-207ENST00000558763 GOLGA8BA8MQT2 603 aa15.2■□□□□ 0.02
SMAD3-207ENST00000558763 FGRP09769 529 aa15.2■□□□□ 0.02
SMAD3-207ENST00000558763 SPTY2D1Q68D10 685 aaPredicted RBP15.2■□□□□ 0.02
SMAD3-207ENST00000558763 CNNM2Q9H8M5 875 aa15.2■□□□□ 0.02
SMAD3-207ENST00000558763 DCP1AQ9NPI6 582 aaPredicted RBP15.2■□□□□ 0.02
SMAD3-207ENST00000558763 RNF181Q9P0P0 153 aa15.2■□□□□ 0.02
SMAD3-207ENST00000558763 MKRN1Q9UHC7 482 aaKnown RBP15.2■□□□□ 0.02
SMAD3-207ENST00000558763 DICER1Q9UPY3 1922 aaKnown RBP15.2■□□□□ 0.02
SMAD3-207ENST00000558763 FOCADQ5VW36 1801 aa15.2■□□□□ 0.02
SMAD3-207ENST00000558763 NID2Q14112 1375 aa15.2■□□□□ 0.02
SMAD3-207ENST00000558763 PSMD14O00487 310 aa15.2■□□□□ 0.02
SMAD3-207ENST00000558763 HMGN5P82970 282 aaKnown RBP15.2■□□□□ 0.02
SMAD3-207ENST00000558763 CXCL9Q07325 125 aa15.2■□□□□ 0.02
SMAD3-207ENST00000558763 DIXDC1Q155Q3 683 aa15.2■□□□□ 0.02
SMAD3-207ENST00000558763 CTR9Q6PD62 1173 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms