RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 CDAN1Q8IWY9 1227 aa9.99□□□□□ -0.81
TRAF3-205ENST00000558700 ZGPATQ8N5A5 531 aaKnown RBP9.99□□□□□ -0.81
TRAF3-205ENST00000558700 OPTNQ96CV9 577 aa9.99□□□□□ -0.81
TRAF3-205ENST00000558700 ELP3Q9H9T3 547 aa9.99□□□□□ -0.81
TRAF3-205ENST00000558700 DENND2AQ9ULE3 1009 aa9.99□□□□□ -0.81
TRAF3-205ENST00000558700 PA2G4Q9UQ80 394 aaKnown RBP9.99□□□□□ -0.81
TRAF3-205ENST00000558700 PDS5AQ29RF7 1337 aaKnown RBP9.99□□□□□ -0.81
TRAF3-205ENST00000558700 SRGAP3O43295 1099 aa9.98□□□□□ -0.81
TRAF3-205ENST00000558700 PRDX5P30044 214 aa9.98□□□□□ -0.81
TRAF3-205ENST00000558700 GJA5P36382 358 aa9.98□□□□□ -0.81
TRAF3-205ENST00000558700 PHKA1P46020 1223 aa9.98□□□□□ -0.81
TRAF3-205ENST00000558700 VGLL4Q14135 290 aa9.98□□□□□ -0.81
TRAF3-205ENST00000558700 APOBEC3HQ6NTF7 200 aaKnown RBP9.98□□□□□ -0.81
TRAF3-205ENST00000558700 FBXO46Q6PJ61 603 aaPredicted RBP9.98□□□□□ -0.81
TRAF3-205ENST00000558700 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.98□□□□□ -0.81
TRAF3-205ENST00000558700 PLPP6Q8IY26 295 aa9.98□□□□□ -0.81
TRAF3-205ENST00000558700 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.98□□□□□ -0.81
TRAF3-205ENST00000558700 FRAT1Q92837 279 aaPredicted RBP9.98□□□□□ -0.81
TRAF3-205ENST00000558700 WRNIP1Q96S55 665 aa9.98□□□□□ -0.81
TRAF3-205ENST00000558700 HPS5Q9UPZ3 1129 aa9.98□□□□□ -0.81
TRAF3-205ENST00000558700 AKAP2Q9Y2D5 859 aa9.98□□□□□ -0.81
TRAF3-205ENST00000558700 DAGLAQ9Y4D2 1042 aa9.98□□□□□ -0.81
TRAF3-205ENST00000558700 RBBP6Q7Z6E9 1792 aaKnown RBP9.98□□□□□ -0.81
TRAF3-205ENST00000558700 SPDYE5A6NIY4 337 aa9.97□□□□□ -0.81
TRAF3-205ENST00000558700 GNAI2P04899 355 aa9.97□□□□□ -0.81
TRAF3-205ENST00000558700 GTF2A2P52657 109 aa9.97□□□□□ -0.81
TRAF3-205ENST00000558700 SOX10P56693 466 aa9.97□□□□□ -0.81
TRAF3-205ENST00000558700 HNRNPUQ00839 825 aaKnown RBP eCLIP9.97□□□□□ -0.81
TRAF3-205ENST00000558700 MVPQ14764 893 aaKnown RBP9.97□□□□□ -0.81
TRAF3-205ENST00000558700 DIXDC1Q155Q3 683 aa9.97□□□□□ -0.81
TRAF3-205ENST00000558700 DZIP1Q86YF9 867 aaKnown RBP9.97□□□□□ -0.81
TRAF3-205ENST00000558700 OTUD5Q96G74 571 aa9.97□□□□□ -0.81
TRAF3-205ENST00000558700 ERO1AQ96HE7 468 aa9.97□□□□□ -0.81
TRAF3-205ENST00000558700 FAM117AQ9C073 453 aa9.97□□□□□ -0.81
TRAF3-205ENST00000558700 DOCK1Q14185 1865 aa9.97□□□□□ -0.81
TRAF3-205ENST00000558700 CCL15-CCL14A0A0B4J2E2 113 aa9.96□□□□□ -0.82
TRAF3-205ENST00000558700 A0A1B0GUL7 405 aa9.96□□□□□ -0.82
TRAF3-205ENST00000558700 GPR37O15354 613 aa9.96□□□□□ -0.82
TRAF3-205ENST00000558700 WDHD1O75717 1129 aaPredicted RBP9.96□□□□□ -0.82
TRAF3-205ENST00000558700 ADORA1P30542 326 aa9.96□□□□□ -0.82
TRAF3-205ENST00000558700 CRHR2Q13324 411 aa9.96□□□□□ -0.82
TRAF3-205ENST00000558700 RASGRF1Q13972 1273 aa9.96□□□□□ -0.82
TRAF3-205ENST00000558700 TAF1CQ15572 869 aaPredicted RBP9.96□□□□□ -0.82
TRAF3-205ENST00000558700 CCL15Q16663 113 aa9.96□□□□□ -0.82
TRAF3-205ENST00000558700 CCDC102BQ68D86 513 aa9.96□□□□□ -0.82
TRAF3-205ENST00000558700 ERO1BQ86YB8 467 aa9.96□□□□□ -0.82
TRAF3-205ENST00000558700 SLF2Q8IX21 1173 aa9.96□□□□□ -0.82
TRAF3-205ENST00000558700 FAM151AQ8WW52 585 aa9.96□□□□□ -0.82
TRAF3-205ENST00000558700 ZNF341Q9BYN7 854 aa9.96□□□□□ -0.82
TRAF3-205ENST00000558700 R3HDMLQ9H3Y0 253 aa9.96□□□□□ -0.82
TRAF3-205ENST00000558700 BMP2KQ9NSY1 1161 aaPredicted RBP9.96□□□□□ -0.82
TRAF3-205ENST00000558700 SNCAIPQ9Y6H5 919 aa9.96□□□□□ -0.82
TRAF3-205ENST00000558700 RFX7Q2KHR2 1363 aa9.96□□□□□ -0.82
TRAF3-205ENST00000558700 IRF6O14896 467 aa9.95□□□□□ -0.82
TRAF3-205ENST00000558700 CETPP11597 493 aa9.95□□□□□ -0.82
TRAF3-205ENST00000558700 TFCP2Q12800 502 aa9.95□□□□□ -0.82
TRAF3-205ENST00000558700 PPIL2Q13356 520 aa9.95□□□□□ -0.82
TRAF3-205ENST00000558700 ZKSCAN2Q63HK3 967 aa9.95□□□□□ -0.82
TRAF3-205ENST00000558700 SPTY2D1Q68D10 685 aaPredicted RBP9.95□□□□□ -0.82
TRAF3-205ENST00000558700 CDC42EP5Q6NZY7 148 aa9.95□□□□□ -0.82
TRAF3-205ENST00000558700 BRI3BPQ8WY22 251 aa9.95□□□□□ -0.82
TRAF3-205ENST00000558700 CLUAP1Q96AJ1 413 aa9.95□□□□□ -0.82
TRAF3-205ENST00000558700 TRIM17Q9Y577 477 aa9.95□□□□□ -0.82
TRAF3-205ENST00000558700 GAKO14976 1311 aa9.95□□□□□ -0.82
TRAF3-205ENST00000558700 BCAR3O75815 825 aa9.94□□□□□ -0.82
TRAF3-205ENST00000558700 TCP10Q12799 353 aa9.94□□□□□ -0.82
TRAF3-205ENST00000558700 SNAPC2Q13487 334 aa9.94□□□□□ -0.82
TRAF3-205ENST00000558700 AMHR2Q16671 573 aa9.94□□□□□ -0.82
TRAF3-205ENST00000558700 GORABQ5T7V8 394 aa9.94□□□□□ -0.82
TRAF3-205ENST00000558700 OTOP1Q7RTM1 612 aa9.94□□□□□ -0.82
TRAF3-205ENST00000558700 FTSJ3Q8IY81 847 aaKnown RBP9.94□□□□□ -0.82
TRAF3-205ENST00000558700 XAGE2Q96GT9 111 aa9.94□□□□□ -0.82
TRAF3-205ENST00000558700 PTPN18Q99952 460 aa9.94□□□□□ -0.82
TRAF3-205ENST00000558700 ZFYVE28Q9HCC9 887 aa9.94□□□□□ -0.82
TRAF3-205ENST00000558700 ZCCHC17Q9NP64 241 aaKnown RBP9.94□□□□□ -0.82
TRAF3-205ENST00000558700 ABCF2Q9UG63 623 aa9.94□□□□□ -0.82
TRAF3-205ENST00000558700 COL2A1P02458 1487 aaPredicted RBP9.93□□□□□ -0.82
TRAF3-205ENST00000558700 ATRNL1Q5VV63 1379 aa9.93□□□□□ -0.82
TRAF3-205ENST00000558700 MROH7-TTC4A0A0A0MT08 1334 aa9.93□□□□□ -0.82
TRAF3-205ENST00000558700 ZBED9Q6R2W3 1325 aa9.93□□□□□ -0.82
TRAF3-205ENST00000558700 ENTPD3O75355 529 aa9.93□□□□□ -0.82
TRAF3-205ENST00000558700 SP3Q02447 781 aa9.93□□□□□ -0.82
TRAF3-205ENST00000558700 PPATQ06203 517 aa9.93□□□□□ -0.82
TRAF3-205ENST00000558700 NFIAQ12857 509 aa9.93□□□□□ -0.82
TRAF3-205ENST00000558700 G3BP1Q13283 466 aaKnown RBP eCLIP9.93□□□□□ -0.82
TRAF3-205ENST00000558700 HIC1Q14526 733 aa9.93□□□□□ -0.82
TRAF3-205ENST00000558700 ARHGEF6Q15052 776 aa9.93□□□□□ -0.82
TRAF3-205ENST00000558700 DIEXFQ68CQ4 756 aaKnown RBP9.93□□□□□ -0.82
TRAF3-205ENST00000558700 TMEM57Q8N5G2 664 aa9.93□□□□□ -0.82
TRAF3-205ENST00000558700 CD99L2Q8TCZ2 262 aa9.93□□□□□ -0.82
TRAF3-205ENST00000558700 ZKSCAN4Q969J2 545 aaPredicted RBP9.93□□□□□ -0.82
TRAF3-205ENST00000558700 IDI2Q9BXS1 227 aa9.93□□□□□ -0.82
TRAF3-205ENST00000558700 USP40Q9NVE5 1235 aa9.93□□□□□ -0.82
TRAF3-205ENST00000558700 TNNQ9UQP3 1299 aa9.93□□□□□ -0.82
TRAF3-205ENST00000558700 PTPRFP10586 1907 aa9.93□□□□□ -0.82
TRAF3-205ENST00000558700 ATAD5Q96QE3 1844 aa9.92□□□□□ -0.82
TRAF3-205ENST00000558700 PDE4DIPQ5VU43 2346 aa9.92□□□□□ -0.82
TRAF3-205ENST00000558700 PNMA6EA0A0J9YXQ4 647 aa9.92□□□□□ -0.82
TRAF3-205ENST00000558700 ARID4AP29374 1257 aaPredicted RBP9.92□□□□□ -0.82
TRAF3-205ENST00000558700 INPP5BP32019 993 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms