RNA–Protein interactions for RNA: ENST00000558415.5

SPG21-206, Transcript of SPG21, maspardin, humanhuman

TSL 3

Gene SPG21, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-206ENST00000558415 RHPN1Q8TCX5 695 aa17.56■□□□□ 0.4
SPG21-206ENST00000558415 IL1RAPL2Q9NP60 686 aa17.56■□□□□ 0.4
SPG21-206ENST00000558415 ZNF112Q9UJU3 913 aa17.56■□□□□ 0.4
SPG21-206ENST00000558415 CDK5RAP2Q96SN8 1893 aa17.56■□□□□ 0.4
SPG21-206ENST00000558415 DDTLA6NHG4 134 aaPredicted RBP17.55■□□□□ 0.4
SPG21-206ENST00000558415 APBB1O00213 710 aa17.55■□□□□ 0.4
SPG21-206ENST00000558415 LDHCP07864 332 aa17.55■□□□□ 0.4
SPG21-206ENST00000558415 SLURP2P0DP57 97 aa17.55■□□□□ 0.4
SPG21-206ENST00000558415 PDE3AQ14432 1141 aa17.55■□□□□ 0.4
SPG21-206ENST00000558415 AACSQ86V21 672 aa17.55■□□□□ 0.4
SPG21-206ENST00000558415 ERO1BQ86YB8 467 aa17.55■□□□□ 0.4
SPG21-206ENST00000558415 BRI3BPQ8WY22 251 aa17.55■□□□□ 0.4
SPG21-206ENST00000558415 PIH1D3Q9NQM4 214 aaKnown RBP17.55■□□□□ 0.4
SPG21-206ENST00000558415 NDUFB9Q9Y6M9 179 aa17.55■□□□□ 0.4
SPG21-206ENST00000558415 CCL15-CCL14A0A0B4J2E2 113 aa17.54■□□□□ 0.4
SPG21-206ENST00000558415 GTF2A2P52657 109 aa17.54■□□□□ 0.4
SPG21-206ENST00000558415 CCL15Q16663 113 aa17.54■□□□□ 0.4
SPG21-206ENST00000558415 HSP90AB4PQ58FF6 505 aa17.54■□□□□ 0.4
SPG21-206ENST00000558415 NOM1Q5C9Z4 860 aaKnown RBP17.54■□□□□ 0.4
SPG21-206ENST00000558415 CTU1Q7Z7A3 348 aaKnown RBP17.54■□□□□ 0.4
SPG21-206ENST00000558415 ADGRA1Q86SQ6 560 aa17.54■□□□□ 0.4
SPG21-206ENST00000558415 FOCADQ5VW36 1801 aa17.54■□□□□ 0.4
SPG21-206ENST00000558415 IRF6O14896 467 aa17.53■□□□□ 0.4
SPG21-206ENST00000558415 HMMRO75330 724 aa17.53■□□□□ 0.4
SPG21-206ENST00000558415 CRHR2Q13324 411 aa17.53■□□□□ 0.4
SPG21-206ENST00000558415 NAA16Q6N069 864 aaPredicted RBP17.53■□□□□ 0.4
SPG21-206ENST00000558415 ZSCAN29Q8IWY8 852 aaPredicted RBP17.53■□□□□ 0.4
SPG21-206ENST00000558415 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.53■□□□□ 0.4
SPG21-206ENST00000558415 CCDC85CA6NKD9 419 aa17.52■□□□□ 0.4
SPG21-206ENST00000558415 PHF20L1A8MW92 1017 aa17.52■□□□□ 0.4
SPG21-206ENST00000558415 FKTNO75072 461 aa17.52■□□□□ 0.4
SPG21-206ENST00000558415 PPIL2Q13356 520 aa17.52■□□□□ 0.4
SPG21-206ENST00000558415 FAM43AQ8N2R8 423 aa17.52■□□□□ 0.4
SPG21-206ENST00000558415 SH3RF3Q8TEJ3 882 aaPredicted RBP17.52■□□□□ 0.4
SPG21-206ENST00000558415 CHMP4BQ9H444 224 aaKnown RBP17.52■□□□□ 0.4
SPG21-206ENST00000558415 AATFQ9NY61 560 aaKnown RBP eCLIP17.52■□□□□ 0.42e-6■■■□□ 17.4
SPG21-206ENST00000558415 DOCK1Q14185 1865 aa17.52■□□□□ 0.39
SPG21-206ENST00000558415 SIPA1L1O43166 1804 aa17.51■□□□□ 0.39
SPG21-206ENST00000558415 PPATQ06203 517 aa17.51■□□□□ 0.39
SPG21-206ENST00000558415 NOL9Q5SY16 702 aaKnown RBP17.51■□□□□ 0.39
SPG21-206ENST00000558415 OTUD7BQ6GQQ9 843 aa17.51■□□□□ 0.39
SPG21-206ENST00000558415 TEX11Q8IYF3 940 aa17.51■□□□□ 0.39
SPG21-206ENST00000558415 KIF1BPQ96EK5 621 aa17.51■□□□□ 0.39
SPG21-206ENST00000558415 ANTXR1Q9H6X2 564 aa17.51■□□□□ 0.39
SPG21-206ENST00000558415 COL2A1P02458 1487 aaPredicted RBP17.5■□□□□ 0.39
SPG21-206ENST00000558415 NPM3O75607 178 aaKnown RBP17.5■□□□□ 0.39
SPG21-206ENST00000558415 MAP4K4O95819 1239 aaPredicted RBP17.5■□□□□ 0.39
SPG21-206ENST00000558415 MAP3K10Q02779 954 aa17.5■□□□□ 0.39
SPG21-206ENST00000558415 SNAPC2Q13487 334 aa17.5■□□□□ 0.39
SPG21-206ENST00000558415 OSBPL5Q9H0X9 879 aaPredicted RBP17.5■□□□□ 0.39
SPG21-206ENST00000558415 BCL11AQ9H165 835 aa17.5■□□□□ 0.39
SPG21-206ENST00000558415 PHIPQ8WWQ0 1821 aa17.49■□□□□ 0.39
SPG21-206ENST00000558415 IDH1O75874 414 aaKnown RBP17.49■□□□□ 0.39
SPG21-206ENST00000558415 CETPP11597 493 aa17.49■□□□□ 0.39
SPG21-206ENST00000558415 CLASRPQ8N2M8 674 aaKnown RBP17.49■□□□□ 0.39
SPG21-206ENST00000558415 YTHDC1Q96MU7 727 aaKnown RBP17.49■□□□□ 0.39
SPG21-206ENST00000558415 NOL10Q9BSC4 688 aaKnown RBP17.49■□□□□ 0.39
SPG21-206ENST00000558415 ATAD5Q96QE3 1844 aa17.49■□□□□ 0.39
SPG21-206ENST00000558415 FAM196BA6NMK8 535 aa17.48■□□□□ 0.39
SPG21-206ENST00000558415 BTBD19C9JJ37 291 aa17.48■□□□□ 0.39
SPG21-206ENST00000558415 RAB11FIP3O75154 756 aa17.48■□□□□ 0.39
SPG21-206ENST00000558415 BAG3O95817 575 aa17.48■□□□□ 0.39
SPG21-206ENST00000558415 PPP4CP60510 307 aa17.48■□□□□ 0.39
SPG21-206ENST00000558415 TAF1CQ15572 869 aaPredicted RBP17.48■□□□□ 0.39
SPG21-206ENST00000558415 KCNH4Q9UQ05 1017 aa17.48■□□□□ 0.39
SPG21-206ENST00000558415 PTPRFP10586 1907 aa17.48■□□□□ 0.39
SPG21-206ENST00000558415 IFIT2P09913 472 aaKnown RBP17.47■□□□□ 0.39
SPG21-206ENST00000558415 CYP7A1P22680 504 aa17.47■□□□□ 0.39
SPG21-206ENST00000558415 DYNLL1P63167 89 aaKnown RBP17.47■□□□□ 0.39
SPG21-206ENST00000558415 SCYL3Q8IZE3 742 aa17.47■□□□□ 0.39
SPG21-206ENST00000558415 TGFBRAP1Q8WUH2 860 aa17.47■□□□□ 0.39
SPG21-206ENST00000558415 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.47■□□□□ 0.39
SPG21-206ENST00000558415 IGSF3O75054 1194 aa17.46■□□□□ 0.39
SPG21-206ENST00000558415 PLCG2P16885 1265 aa17.46■□□□□ 0.39
SPG21-206ENST00000558415 PTPRAP18433 802 aa17.46■□□□□ 0.39
SPG21-206ENST00000558415 CAP1Q01518 475 aa17.46■□□□□ 0.39
SPG21-206ENST00000558415 MOGSQ13724 837 aa17.46■□□□□ 0.39
SPG21-206ENST00000558415 MAPKAPK5Q8IW41 473 aa17.46■□□□□ 0.39
SPG21-206ENST00000558415 MAGEB6Q8N7X4 407 aa17.46■□□□□ 0.39
SPG21-206ENST00000558415 MIGA1Q8NAN2 632 aa17.46■□□□□ 0.39
SPG21-206ENST00000558415 ZSWIM8A7E2V4 1837 aa17.46■□□□□ 0.39
SPG21-206ENST00000558415 FLT1P17948 1338 aa17.46■□□□□ 0.38
SPG21-206ENST00000558415 MYH1P12882 1939 aa17.45■□□□□ 0.38
SPG21-206ENST00000558415 HTTP42858 3142 aa17.45■□□□□ 0.38
SPG21-206ENST00000558415 TBC1D12O60347 775 aa17.45■□□□□ 0.38
SPG21-206ENST00000558415 CTNND1O60716 968 aaKnown RBP17.45■□□□□ 0.38
SPG21-206ENST00000558415 PKN2Q16513 984 aaKnown RBP17.45■□□□□ 0.38
SPG21-206ENST00000558415 CD99L2Q8TCZ2 262 aa17.45■□□□□ 0.38
SPG21-206ENST00000558415 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.45■□□□□ 0.38
SPG21-206ENST00000558415 ZFYVE28Q9HCC9 887 aa17.45■□□□□ 0.38
SPG21-206ENST00000558415 PICK1Q9NRD5 415 aa17.45■□□□□ 0.38
SPG21-206ENST00000558415 HPS5Q9UPZ3 1129 aa17.45■□□□□ 0.38
SPG21-206ENST00000558415 ZHX2Q9Y6X8 837 aa17.45■□□□□ 0.38
SPG21-206ENST00000558415 SMARCA5O60264 1052 aaPredicted RBP17.44■□□□□ 0.38
SPG21-206ENST00000558415 RRP1P56182 461 aaKnown RBP17.44■□□□□ 0.38
SPG21-206ENST00000558415 SP3Q02447 781 aa17.44■□□□□ 0.38
SPG21-206ENST00000558415 MAP3K12Q12852 859 aa17.44■□□□□ 0.38
SPG21-206ENST00000558415 RRP1BQ14684 758 aaKnown RBP17.44■□□□□ 0.38
SPG21-206ENST00000558415 OTOP1Q7RTM1 612 aa17.44■□□□□ 0.38
SPG21-206ENST00000558415 CCDC84Q86UT8 332 aaPredicted RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms