RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 ZNF804AQ7Z570 1209 aa14.74□□□□□ -0.05
HMGB1P8-201ENST00000558211 FAM84BQ96KN1 310 aaPredicted RBP14.74□□□□□ -0.05
HMGB1P8-201ENST00000558211 DBNDD2Q9BQY9 259 aa14.74□□□□□ -0.05
HMGB1P8-201ENST00000558211 VPS33BQ9H267 617 aa14.74□□□□□ -0.05
HMGB1P8-201ENST00000558211 GPR108Q9NPR9 543 aa14.74□□□□□ -0.05
HMGB1P8-201ENST00000558211 IQSEC3Q9UPP2 1182 aaPredicted RBP14.74□□□□□ -0.05
HMGB1P8-201ENST00000558211 DICER1Q9UPY3 1922 aaKnown RBP14.74□□□□□ -0.05
HMGB1P8-201ENST00000558211 ZNF609O15014 1411 aa14.74□□□□□ -0.05
HMGB1P8-201ENST00000558211 FRAT2O75474 233 aaPredicted RBP14.73□□□□□ -0.05
HMGB1P8-201ENST00000558211 IFIT2P09913 472 aaKnown RBP14.73□□□□□ -0.05
HMGB1P8-201ENST00000558211 FDX1P10109 184 aa14.73□□□□□ -0.05
HMGB1P8-201ENST00000558211 ERICH6BQ5W0A0 696 aa14.73□□□□□ -0.05
HMGB1P8-201ENST00000558211 C15orf52Q6ZUT6 534 aaKnown RBP14.73□□□□□ -0.05
HMGB1P8-201ENST00000558211 SMC5Q8IY18 1101 aa14.73□□□□□ -0.05
HMGB1P8-201ENST00000558211 PPP4R2Q9NY27 417 aa14.73□□□□□ -0.05
HMGB1P8-201ENST00000558211 TLR7Q9NYK1 1049 aaKnown RBP14.73□□□□□ -0.05
HMGB1P8-201ENST00000558211 COL4A5P29400 1685 aa14.73□□□□□ -0.05
HMGB1P8-201ENST00000558211 IRS2Q9Y4H2 1338 aa14.72□□□□□ -0.05
HMGB1P8-201ENST00000558211 PHKA1P46020 1223 aa14.72□□□□□ -0.05
HMGB1P8-201ENST00000558211 C16orf71Q8IYS4 520 aaPredicted RBP14.72□□□□□ -0.05
HMGB1P8-201ENST00000558211 LNPKQ9C0E8 428 aa14.72□□□□□ -0.05
HMGB1P8-201ENST00000558211 COA1Q9GZY4 146 aa14.72□□□□□ -0.05
HMGB1P8-201ENST00000558211 GOPCQ9HD26 462 aa14.72□□□□□ -0.05
HMGB1P8-201ENST00000558211 CD209Q9NNX6 404 aa14.72□□□□□ -0.05
HMGB1P8-201ENST00000558211 KCNQ5Q9NR82 932 aa14.72□□□□□ -0.05
HMGB1P8-201ENST00000558211 PLA2G2EQ9NZK7 142 aa14.72□□□□□ -0.05
HMGB1P8-201ENST00000558211 LIMD1Q9UGP4 676 aa14.72□□□□□ -0.05
HMGB1P8-201ENST00000558211 ZNRF3Q9ULT6 936 aa14.72□□□□□ -0.05
HMGB1P8-201ENST00000558211 JAG2Q9Y219 1238 aa14.72□□□□□ -0.05
HMGB1P8-201ENST00000558211 YDJCA8MPS7 323 aa14.71□□□□□ -0.05
HMGB1P8-201ENST00000558211 RAD17O75943 681 aa14.71□□□□□ -0.05
HMGB1P8-201ENST00000558211 EIF6P56537 245 aaKnown RBP14.71□□□□□ -0.05
HMGB1P8-201ENST00000558211 TUSC1Q2TAM9 212 aa14.71□□□□□ -0.05
HMGB1P8-201ENST00000558211 CCDC102BQ68D86 513 aa14.71□□□□□ -0.05
HMGB1P8-201ENST00000558211 BRICD5Q6PL45 260 aa14.71□□□□□ -0.05
HMGB1P8-201ENST00000558211 FBXO33Q7Z6M2 555 aa14.71□□□□□ -0.05
HMGB1P8-201ENST00000558211 DBNLQ9UJU6 430 aaKnown RBP14.71□□□□□ -0.05
HMGB1P8-201ENST00000558211 TLL1O43897 1013 aa14.7□□□□□ -0.06
HMGB1P8-201ENST00000558211 CHAF1AQ13111 956 aaPredicted RBP14.7□□□□□ -0.06
HMGB1P8-201ENST00000558211 SKIV2LQ15477 1246 aaKnown RBP14.7□□□□□ -0.06
HMGB1P8-201ENST00000558211 CCDC158Q5M9N0 1113 aa14.7□□□□□ -0.06
HMGB1P8-201ENST00000558211 TTC39AQ5SRH9 613 aa14.7□□□□□ -0.06
HMGB1P8-201ENST00000558211 PODNQ7Z5L7 613 aa14.7□□□□□ -0.06
HMGB1P8-201ENST00000558211 GNL3LQ9NVN8 582 aaKnown RBP14.7□□□□□ -0.06
HMGB1P8-201ENST00000558211 GJA3Q9Y6H8 435 aa14.7□□□□□ -0.06
HMGB1P8-201ENST00000558211 TIAM2Q8IVF5 1701 aa14.69□□□□□ -0.06
HMGB1P8-201ENST00000558211 ARAP2Q8WZ64 1704 aa14.69□□□□□ -0.06
HMGB1P8-201ENST00000558211 CLK2P49760 499 aaKnown RBP14.69□□□□□ -0.06
HMGB1P8-201ENST00000558211 GTF2IP78347 998 aa14.69□□□□□ -0.06
HMGB1P8-201ENST00000558211 CXCL9Q07325 125 aa14.69□□□□□ -0.06
HMGB1P8-201ENST00000558211 Q3C1V9 767 aa14.69□□□□□ -0.06
HMGB1P8-201ENST00000558211 RNF19BQ6ZMZ0 732 aa14.69□□□□□ -0.06
HMGB1P8-201ENST00000558211 CHD1LQ86WJ1 897 aa14.69□□□□□ -0.06
HMGB1P8-201ENST00000558211 NKX2-3Q8TAU0 364 aa14.69□□□□□ -0.06
HMGB1P8-201ENST00000558211 UTRNP46939 3433 aa14.69□□□□□ -0.06
HMGB1P8-201ENST00000558211 SCN9AQ15858 1988 aa14.69□□□□□ -0.06
HMGB1P8-201ENST00000558211 ZNF541Q9H0D2 1346 aa14.68□□□□□ -0.06
HMGB1P8-201ENST00000558211 FZD9O00144 591 aa14.68□□□□□ -0.06
HMGB1P8-201ENST00000558211 IL1R1P14778 569 aa14.68□□□□□ -0.06
HMGB1P8-201ENST00000558211 NUCB1Q02818 461 aa14.68□□□□□ -0.06
HMGB1P8-201ENST00000558211 TTLL5Q6EMB2 1281 aa14.68□□□□□ -0.06
HMGB1P8-201ENST00000558211 CIAPIN1Q6FI81 312 aa14.68□□□□□ -0.06
HMGB1P8-201ENST00000558211 CENPQQ7L2Z9 268 aaPredicted RBP14.68□□□□□ -0.06
HMGB1P8-201ENST00000558211 TDRD7Q8NHU6 1098 aaKnown RBP14.68□□□□□ -0.06
HMGB1P8-201ENST00000558211 OTUD7AQ8TE49 926 aaPredicted RBP14.68□□□□□ -0.06
HMGB1P8-201ENST00000558211 MYH13Q9UKX3 1938 aa14.68□□□□□ -0.06
HMGB1P8-201ENST00000558211 USP17L3A6NCW0 530 aa14.67□□□□□ -0.06
HMGB1P8-201ENST00000558211 USP17L4A6NCW7 530 aa14.67□□□□□ -0.06
HMGB1P8-201ENST00000558211 PSMD14O00487 310 aa14.67□□□□□ -0.06
HMGB1P8-201ENST00000558211 UQCRFS1P1P0C7P4 283 aa14.67□□□□□ -0.06
HMGB1P8-201ENST00000558211 TSHZ3Q63HK5 1081 aa14.67□□□□□ -0.06
HMGB1P8-201ENST00000558211 USP17L1Q7RTZ2 530 aa14.67□□□□□ -0.06
HMGB1P8-201ENST00000558211 MXD3Q9BW11 206 aa14.67□□□□□ -0.06
HMGB1P8-201ENST00000558211 SNRKQ9NRH2 765 aa14.67□□□□□ -0.06
HMGB1P8-201ENST00000558211 POLR3EQ9NVU0 708 aa14.67□□□□□ -0.06
HMGB1P8-201ENST00000558211 KDM2BQ8NHM5 1336 aa14.66□□□□□ -0.06
HMGB1P8-201ENST00000558211 DDNO94850 711 aaPredicted RBP14.66□□□□□ -0.06
HMGB1P8-201ENST00000558211 FMNL1O95466 1100 aaPredicted RBP14.66□□□□□ -0.06
HMGB1P8-201ENST00000558211 ADH1BP00325 375 aa14.66□□□□□ -0.06
HMGB1P8-201ENST00000558211 SCARF1Q14162 830 aa14.66□□□□□ -0.06
HMGB1P8-201ENST00000558211 TNIP1Q15025 636 aa14.66□□□□□ -0.06
HMGB1P8-201ENST00000558211 ARID4AP29374 1257 aaPredicted RBP14.65□□□□□ -0.06
HMGB1P8-201ENST00000558211 MCAMP43121 646 aa14.65□□□□□ -0.06
HMGB1P8-201ENST00000558211 RASGRF1Q13972 1273 aa14.65□□□□□ -0.06
HMGB1P8-201ENST00000558211 PI16Q6UXB8 463 aa14.65□□□□□ -0.06
HMGB1P8-201ENST00000558211 ZNF526Q8TF50 670 aaPredicted RBP14.65□□□□□ -0.06
HMGB1P8-201ENST00000558211 GPATCH3Q96I76 525 aa14.65□□□□□ -0.06
HMGB1P8-201ENST00000558211 SPSB2Q99619 263 aa14.65□□□□□ -0.06
HMGB1P8-201ENST00000558211 BOLA2Q9H3K6 86 aa14.65□□□□□ -0.06
HMGB1P8-201ENST00000558211 DENND2AQ9ULE3 1009 aa14.65□□□□□ -0.06
HMGB1P8-201ENST00000558211 NDUFB9Q9Y6M9 179 aa14.65□□□□□ -0.06
HMGB1P8-201ENST00000558211 MX1P20591 662 aa14.64□□□□□ -0.07
HMGB1P8-201ENST00000558211 STRIP1Q5VSL9 837 aa14.64□□□□□ -0.07
HMGB1P8-201ENST00000558211 SPATA5Q8NB90 893 aa14.64□□□□□ -0.07
HMGB1P8-201ENST00000558211 SYMPKQ92797 1274 aaKnown RBP14.64□□□□□ -0.07
HMGB1P8-201ENST00000558211 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.64□□□□□ -0.07
HMGB1P8-201ENST00000558211 ECHDC1Q9NTX5 307 aa14.64□□□□□ -0.07
HMGB1P8-201ENST00000558211 HMG20BQ9P0W2 317 aa14.64□□□□□ -0.07
HMGB1P8-201ENST00000558211 GLTPD2A6NH11 291 aa14.63□□□□□ -0.07
HMGB1P8-201ENST00000558211 F8W031 263 aaPredicted RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms