RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 EIF3FO00303 357 aaPredicted RBP12.46□□□□□ -0.42
SEMA4B-204ENST00000558065 CUTAO60888 179 aa12.46□□□□□ -0.42
SEMA4B-204ENST00000558065 WDHD1O75717 1129 aaPredicted RBP12.46□□□□□ -0.42
SEMA4B-204ENST00000558065 UPP2O95045 317 aa12.46□□□□□ -0.42
SEMA4B-204ENST00000558065 SESN3P58005 492 aa12.46□□□□□ -0.42
SEMA4B-204ENST00000558065 RC3H1Q5TC82 1133 aaKnown RBP12.46□□□□□ -0.42
SEMA4B-204ENST00000558065 OLFML1Q6UWY5 402 aa12.46□□□□□ -0.42
SEMA4B-204ENST00000558065 SLF2Q8IX21 1173 aa12.46□□□□□ -0.42
SEMA4B-204ENST00000558065 ATP11CQ8NB49 1132 aa12.46□□□□□ -0.42
SEMA4B-204ENST00000558065 CFAP53Q96M91 514 aa12.46□□□□□ -0.42
SEMA4B-204ENST00000558065 PREBQ9HCU5 417 aa12.46□□□□□ -0.42
SEMA4B-204ENST00000558065 GALNT8Q9NY28 637 aa12.46□□□□□ -0.42
SEMA4B-204ENST00000558065 AATFQ9NY61 560 aaKnown RBP eCLIP12.46□□□□□ -0.42
SEMA4B-204ENST00000558065 ATP8A1Q9Y2Q0 1164 aa12.46□□□□□ -0.42
SEMA4B-204ENST00000558065 BZW2Q9Y6E2 419 aaKnown RBP12.46□□□□□ -0.42
SEMA4B-204ENST00000558065 GPR75-ASB3A0A0A6YYF3 556 aa12.45□□□□□ -0.42
SEMA4B-204ENST00000558065 GOLGA6L10A6NI86 522 aa12.45□□□□□ -0.42
SEMA4B-204ENST00000558065 PARP1P09874 1014 aaKnown RBP12.45□□□□□ -0.42
SEMA4B-204ENST00000558065 SFPQP23246 707 aaKnown RBP eCLIP12.45□□□□□ -0.42
SEMA4B-204ENST00000558065 STIP1P31948 543 aaKnown RBP12.45□□□□□ -0.42
SEMA4B-204ENST00000558065 MYOCDQ8IZQ8 938 aa12.45□□□□□ -0.42
SEMA4B-204ENST00000558065 SNRNP27Q8WVK2 155 aaKnown RBP12.45□□□□□ -0.42
SEMA4B-204ENST00000558065 HAUS2Q9NVX0 235 aa12.45□□□□□ -0.42
SEMA4B-204ENST00000558065 ASB3Q9Y575 518 aa12.45□□□□□ -0.42
SEMA4B-204ENST00000558065 MAP3K5Q99683 1374 aa12.45□□□□□ -0.42
SEMA4B-204ENST00000558065 LAMC1P11047 1609 aa12.45□□□□□ -0.42
SEMA4B-204ENST00000558065 AGPSO00116 658 aa12.45□□□□□ -0.42
SEMA4B-204ENST00000558065 CREB3O43889 395 aa12.45□□□□□ -0.42
SEMA4B-204ENST00000558065 DRP2Q13474 957 aa12.45□□□□□ -0.42
SEMA4B-204ENST00000558065 RPAP2Q8IXW5 612 aaPredicted RBP12.45□□□□□ -0.42
SEMA4B-204ENST00000558065 ZFATQ9P243 1243 aa12.45□□□□□ -0.42
SEMA4B-204ENST00000558065 PALD1Q9ULE6 856 aa12.45□□□□□ -0.42
SEMA4B-204ENST00000558065 MRC2Q9UBG0 1479 aa12.45□□□□□ -0.42
SEMA4B-204ENST00000558065 A0A1B0GVL5 298 aa12.45□□□□□ -0.42
SEMA4B-204ENST00000558065 NDUFAB1O14561 156 aa12.45□□□□□ -0.42
SEMA4B-204ENST00000558065 DCTN1Q14203 1278 aa12.45□□□□□ -0.42
SEMA4B-204ENST00000558065 SPRED3Q2MJR0 410 aa12.45□□□□□ -0.42
SEMA4B-204ENST00000558065 SMUG1Q53HV7 270 aa12.45□□□□□ -0.42
SEMA4B-204ENST00000558065 Q6ZUG5 572 aa12.45□□□□□ -0.42
SEMA4B-204ENST00000558065 JAKMIP1Q96N16 626 aaKnown RBP12.45□□□□□ -0.42
SEMA4B-204ENST00000558065 ANO10Q9NW15 660 aa12.45□□□□□ -0.42
SEMA4B-204ENST00000558065 ATP6V1DQ9Y5K8 247 aa12.45□□□□□ -0.42
SEMA4B-204ENST00000558065 ABCC11Q96J66 1382 aa12.44□□□□□ -0.42
SEMA4B-204ENST00000558065 SENP2Q9HC62 589 aa12.44□□□□□ -0.42
SEMA4B-204ENST00000558065 SLC5A4Q9NY91 659 aa12.44□□□□□ -0.42
SEMA4B-204ENST00000558065 ITM2BQ9Y287 266 aa12.44□□□□□ -0.42
SEMA4B-204ENST00000558065 N6AMT1Q9Y5N5 214 aa12.44□□□□□ -0.42
SEMA4B-204ENST00000558065 ASXL1Q8IXJ9 1541 aa12.44□□□□□ -0.42
SEMA4B-204ENST00000558065 HARSP12081 509 aaKnown RBP12.44□□□□□ -0.42
SEMA4B-204ENST00000558065 MECOMQ03112 1051 aa12.44□□□□□ -0.42
SEMA4B-204ENST00000558065 IFFO1Q0D2I5 559 aa12.44□□□□□ -0.42
SEMA4B-204ENST00000558065 SIRT2Q8IXJ6 389 aa12.44□□□□□ -0.42
SEMA4B-204ENST00000558065 L3MBTL1Q9Y468 752 aa12.44□□□□□ -0.42
SEMA4B-204ENST00000558065 BECN2A8MW95 431 aa12.44□□□□□ -0.42
SEMA4B-204ENST00000558065 BUB1BO60566 1050 aaPredicted RBP12.44□□□□□ -0.42
SEMA4B-204ENST00000558065 ATP6V1G2O95670 118 aa12.44□□□□□ -0.42
SEMA4B-204ENST00000558065 SLMAPQ14BN4 828 aa12.44□□□□□ -0.42
SEMA4B-204ENST00000558065 NUTM2DQ5VT03 806 aaPredicted RBP12.44□□□□□ -0.42
SEMA4B-204ENST00000558065 C6orf89Q6UWU4 347 aa12.44□□□□□ -0.42
SEMA4B-204ENST00000558065 SLC15A3Q8IY34 581 aa12.44□□□□□ -0.42
SEMA4B-204ENST00000558065 TBC1D31Q96DN5 1066 aa12.44□□□□□ -0.42
SEMA4B-204ENST00000558065 CLIP3Q96DZ5 547 aa12.44□□□□□ -0.42
SEMA4B-204ENST00000558065 DUSP9Q99956 384 aaKnown RBP12.44□□□□□ -0.42
SEMA4B-204ENST00000558065 MYO5CQ9NQX4 1742 aa12.43□□□□□ -0.42
SEMA4B-204ENST00000558065 TIMM44O43615 452 aa12.43□□□□□ -0.42
SEMA4B-204ENST00000558065 GFPT2O94808 682 aa12.43□□□□□ -0.42
SEMA4B-204ENST00000558065 ANP32DO95626 131 aa12.43□□□□□ -0.42
SEMA4B-204ENST00000558065 SDSP20132 328 aa12.43□□□□□ -0.42
SEMA4B-204ENST00000558065 CUL4BQ13620 913 aa12.43□□□□□ -0.42
SEMA4B-204ENST00000558065 LEO1Q8WVC0 666 aaPredicted RBP12.43□□□□□ -0.42
SEMA4B-204ENST00000558065 NOD2Q9HC29 1040 aa12.43□□□□□ -0.42
SEMA4B-204ENST00000558065 GGCXP38435 758 aa12.43□□□□□ -0.42
SEMA4B-204ENST00000558065 HDAC4P56524 1084 aa12.43□□□□□ -0.42
SEMA4B-204ENST00000558065 HOOK3Q86VS8 718 aa12.43□□□□□ -0.42
SEMA4B-204ENST00000558065 TTC30AQ86WT1 665 aa12.43□□□□□ -0.42
SEMA4B-204ENST00000558065 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.43□□□□□ -0.422e-6■■■□□ 19.1
SEMA4B-204ENST00000558065 DDX19AQ9NUU7 478 aaKnown RBP12.43□□□□□ -0.42
SEMA4B-204ENST00000558065 NLRP2Q9NX02 1062 aa12.43□□□□□ -0.42
SEMA4B-204ENST00000558065 C2CD2Q9Y426 696 aa12.43□□□□□ -0.42
SEMA4B-204ENST00000558065 ABCC10Q5T3U5 1492 aa12.43□□□□□ -0.42
SEMA4B-204ENST00000558065 NPHP3Q7Z494 1330 aa12.43□□□□□ -0.42
SEMA4B-204ENST00000558065 DPPA5A6NC42 116 aa12.43□□□□□ -0.42
SEMA4B-204ENST00000558065 ALOX15P16050 662 aaPredicted RBP12.43□□□□□ -0.42
SEMA4B-204ENST00000558065 FLT3P36888 993 aa12.43□□□□□ -0.42
SEMA4B-204ENST00000558065 RETREG1Q9H6L5 497 aa12.43□□□□□ -0.42
SEMA4B-204ENST00000558065 XRCC4Q13426 336 aa12.42□□□□□ -0.42
SEMA4B-204ENST00000558065 TEKT4Q8WW24 435 aa12.42□□□□□ -0.42
SEMA4B-204ENST00000558065 TRIM11Q96F44 468 aa12.42□□□□□ -0.42
SEMA4B-204ENST00000558065 INCENPQ9NQS7 918 aa12.42□□□□□ -0.42
SEMA4B-204ENST00000558065 EVC2Q86UK5 1308 aa12.42□□□□□ -0.42
SEMA4B-204ENST00000558065 MYOM1P52179 1685 aa12.42□□□□□ -0.42
SEMA4B-204ENST00000558065 DESP17661 470 aa12.42□□□□□ -0.42
SEMA4B-204ENST00000558065 GNG11P61952 73 aa12.42□□□□□ -0.42
SEMA4B-204ENST00000558065 KIAA0753Q2KHM9 967 aa12.42□□□□□ -0.42
SEMA4B-204ENST00000558065 ZNF394Q53GI3 561 aa12.42□□□□□ -0.42
SEMA4B-204ENST00000558065 RNF187Q5TA31 235 aaPredicted RBP12.42□□□□□ -0.42
SEMA4B-204ENST00000558065 NAA35Q5VZE5 725 aa12.42□□□□□ -0.42
SEMA4B-204ENST00000558065 SMARCC2Q8TAQ2 1214 aa12.42□□□□□ -0.42
SEMA4B-204ENST00000558065 IL17RAQ96F46 866 aa12.42□□□□□ -0.42
SEMA4B-204ENST00000558065 OXCT2Q9BYC2 517 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms