RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 FOXD4L5Q5VV16 416 aaPredicted RBP24.07■■□□□ 1.44
SNRPA1-205ENST00000558036 KIAA0825Q8IV33 1275 aa24.07■■□□□ 1.44
SNRPA1-205ENST00000558036 TIAM2Q8IVF5 1701 aa24.07■■□□□ 1.44
SNRPA1-205ENST00000558036 SLF2Q8IX21 1173 aa24.07■■□□□ 1.44
SNRPA1-205ENST00000558036 FOXD4L4Q8WXT5 416 aaPredicted RBP24.07■■□□□ 1.44
SNRPA1-205ENST00000558036 FAM163AQ96GL9 167 aaPredicted RBP24.07■■□□□ 1.44
SNRPA1-205ENST00000558036 MKRN1Q9UHC7 482 aaKnown RBP24.07■■□□□ 1.44
SNRPA1-205ENST00000558036 SMC3Q9UQE7 1217 aa24.07■■□□□ 1.44
SNRPA1-205ENST00000558036 SUGT1Q9Y2Z0 365 aa24.07■■□□□ 1.44
SNRPA1-205ENST00000558036 PRDM1O75626 825 aa24.07■■□□□ 1.44
SNRPA1-205ENST00000558036 MAPKAPK5Q8IW41 473 aa24.07■■□□□ 1.44
SNRPA1-205ENST00000558036 GTF3C6Q969F1 213 aa24.07■■□□□ 1.44
SNRPA1-205ENST00000558036 PSMD1Q99460 953 aa24.07■■□□□ 1.44
SNRPA1-205ENST00000558036 SCN9AQ15858 1988 aa24.07■■□□□ 1.44
SNRPA1-205ENST00000558036 USP17L3A6NCW0 530 aa24.06■■□□□ 1.44
SNRPA1-205ENST00000558036 USP17L4A6NCW7 530 aa24.06■■□□□ 1.44
SNRPA1-205ENST00000558036 RHBDL3P58872 404 aa24.06■■□□□ 1.44
SNRPA1-205ENST00000558036 USP17L1Q7RTZ2 530 aa24.06■■□□□ 1.44
SNRPA1-205ENST00000558036 RAB11FIP4Q86YS3 637 aa24.06■■□□□ 1.44
SNRPA1-205ENST00000558036 CNNM2Q9H8M5 875 aa24.06■■□□□ 1.44
SNRPA1-205ENST00000558036 SENP2Q9HC62 589 aa24.06■■□□□ 1.44
SNRPA1-205ENST00000558036 BRPF3Q9ULD4 1205 aa24.06■■□□□ 1.44
SNRPA1-205ENST00000558036 ZDHHC9Q9Y397 364 aa24.06■■□□□ 1.44
SNRPA1-205ENST00000558036 GJB2P29033 226 aa24.05■■□□□ 1.44
SNRPA1-205ENST00000558036 CCT2P78371 535 aaKnown RBP24.05■■□□□ 1.44
SNRPA1-205ENST00000558036 SCRN1Q12765 414 aa24.05■■□□□ 1.44
SNRPA1-205ENST00000558036 TEX11Q8IYF3 940 aa24.05■■□□□ 1.44
SNRPA1-205ENST00000558036 ZKSCAN3Q9BRR0 538 aa24.05■■□□□ 1.44
SNRPA1-205ENST00000558036 KRT23Q9C075 422 aa24.05■■□□□ 1.44
SNRPA1-205ENST00000558036 NCOA5Q9HCD5 579 aaKnown RBP24.05■■□□□ 1.44
SNRPA1-205ENST00000558036 PDIA3P30101 505 aaKnown RBP24.05■■□□□ 1.44
SNRPA1-205ENST00000558036 LARGE2Q8N3Y3 721 aa24.05■■□□□ 1.44
SNRPA1-205ENST00000558036 FBXL16Q8N461 479 aa24.05■■□□□ 1.44
SNRPA1-205ENST00000558036 RNF41Q9H4P4 317 aaPredicted RBP24.05■■□□□ 1.44
SNRPA1-205ENST00000558036 SAP30BPQ9UHR5 308 aaKnown RBP24.05■■□□□ 1.44
SNRPA1-205ENST00000558036 NUCB2P80303 420 aa24.04■■□□□ 1.44
SNRPA1-205ENST00000558036 GRIPAP1Q4V328 841 aa24.04■■□□□ 1.44
SNRPA1-205ENST00000558036 ARPP21Q9UBL0 812 aaPredicted RBP24.04■■□□□ 1.44
SNRPA1-205ENST00000558036 CD2APQ9Y5K6 639 aa24.04■■□□□ 1.44
SNRPA1-205ENST00000558036 COL4A5P29400 1685 aa24.04■■□□□ 1.44
SNRPA1-205ENST00000558036 KLF18A0A0U1RQI7 1052 aa24.04■■□□□ 1.44
SNRPA1-205ENST00000558036 ANP32EQ9BTT0 268 aa24.04■■□□□ 1.44
SNRPA1-205ENST00000558036 PCDHAC2Q9Y5I4 1007 aa24.04■■□□□ 1.44
SNRPA1-205ENST00000558036 WDR19Q8NEZ3 1342 aa24.04■■□□□ 1.44
SNRPA1-205ENST00000558036 SH2B2O14492 632 aaPredicted RBP24.03■■□□□ 1.44
SNRPA1-205ENST00000558036 PFKFB2O60825 505 aa24.03■■□□□ 1.44
SNRPA1-205ENST00000558036 ANGEL1Q9UNK9 670 aaKnown RBP24.03■■□□□ 1.44
SNRPA1-205ENST00000558036 BCS1LQ9Y276 419 aa24.03■■□□□ 1.44
SNRPA1-205ENST00000558036 PPFIA3O75145 1194 aa24.02■■□□□ 1.44
SNRPA1-205ENST00000558036 NLGN2Q8NFZ4 835 aa24.02■■□□□ 1.44
SNRPA1-205ENST00000558036 IGDCC4Q8TDY8 1250 aa24.02■■□□□ 1.44
SNRPA1-205ENST00000558036 JAK2O60674 1132 aa24.02■■□□□ 1.44
SNRPA1-205ENST00000558036 RAD17O75943 681 aa24.02■■□□□ 1.44
SNRPA1-205ENST00000558036 SBK1Q52WX2 424 aa24.02■■□□□ 1.44
SNRPA1-205ENST00000558036 TMEM67Q5HYA8 995 aa24.02■■□□□ 1.44
SNRPA1-205ENST00000558036 ADAMTSL1Q8N6G6 1762 aa24.01■■□□□ 1.43
SNRPA1-205ENST00000558036 IFIT3O14879 490 aaKnown RBP24.01■■□□□ 1.43
SNRPA1-205ENST00000558036 PLCG2P16885 1265 aa24.01■■□□□ 1.43
SNRPA1-205ENST00000558036 TEKT1Q969V4 418 aa24.01■■□□□ 1.43
SNRPA1-205ENST00000558036 ZNF274Q96GC6 653 aaPredicted RBP24.01■■□□□ 1.43
SNRPA1-205ENST00000558036 FLT1P17948 1338 aa24.01■■□□□ 1.43
SNRPA1-205ENST00000558036 GOLGA8BA8MQT2 603 aa24.01■■□□□ 1.43
SNRPA1-205ENST00000558036 RANBP6O60518 1105 aaKnown RBP24.01■■□□□ 1.43
SNRPA1-205ENST00000558036 EVCP57679 992 aa24.01■■□□□ 1.43
SNRPA1-205ENST00000558036 SOGA3Q5TF21 947 aa24.01■■□□□ 1.43
SNRPA1-205ENST00000558036 C12orf60Q5U649 245 aa24.01■■□□□ 1.43
SNRPA1-205ENST00000558036 CERS3Q8IU89 383 aa24.01■■□□□ 1.43
SNRPA1-205ENST00000558036 DYNLL2Q96FJ2 89 aa24.01■■□□□ 1.43
SNRPA1-205ENST00000558036 LY9Q9HBG7 655 aa24.01■■□□□ 1.43
SNRPA1-205ENST00000558036 CRKP46108 304 aa24■■□□□ 1.43
SNRPA1-205ENST00000558036 PLCD1P51178 756 aa24■■□□□ 1.43
SNRPA1-205ENST00000558036 APOBEC3HQ6NTF7 200 aaKnown RBP24■■□□□ 1.43
SNRPA1-205ENST00000558036 ESR2Q92731 530 aa24■■□□□ 1.43
SNRPA1-205ENST00000558036 TMEM87BQ96K49 555 aa24■■□□□ 1.43
SNRPA1-205ENST00000558036 RXRAP19793 462 aa23.99■■□□□ 1.43
SNRPA1-205ENST00000558036 SYT1P21579 422 aa23.99■■□□□ 1.43
SNRPA1-205ENST00000558036 PICALMQ13492 652 aa23.99■■□□□ 1.43
SNRPA1-205ENST00000558036 HPS5Q9UPZ3 1129 aa23.99■■□□□ 1.43
SNRPA1-205ENST00000558036 CHAMP1Q96JM3 812 aa23.99■■□□□ 1.43
SNRPA1-205ENST00000558036 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.99■■□□□ 1.43
SNRPA1-205ENST00000558036 POLR3DP05423 398 aaPredicted RBP23.98■■□□□ 1.43
SNRPA1-205ENST00000558036 FGRP09769 529 aa23.98■■□□□ 1.43
SNRPA1-205ENST00000558036 RBM5P52756 815 aaKnown RBP eCLIP23.98■■□□□ 1.436e-6■□□□□ 9
SNRPA1-205ENST00000558036 FKBP1AP62942 108 aaKnown RBP23.98■■□□□ 1.43
SNRPA1-205ENST00000558036 HHIPL2Q6UWX4 724 aa23.98■■□□□ 1.43
SNRPA1-205ENST00000558036 NFXL1Q6ZNB6 911 aa23.98■■□□□ 1.43
SNRPA1-205ENST00000558036 DDX11Q96FC9 970 aa23.98■■□□□ 1.43
SNRPA1-205ENST00000558036 USP40Q9NVE5 1235 aa23.98■■□□□ 1.43
SNRPA1-205ENST00000558036 CTDNEP1O95476 244 aa23.98■■□□□ 1.43
SNRPA1-205ENST00000558036 BRD1O95696 1058 aa23.98■■□□□ 1.43
SNRPA1-205ENST00000558036 IARSP41252 1262 aaKnown RBP23.98■■□□□ 1.43
SNRPA1-205ENST00000558036 FAM47AQ5JRC9 791 aa23.98■■□□□ 1.43
SNRPA1-205ENST00000558036 MYL10Q9BUA6 226 aa23.98■■□□□ 1.43
SNRPA1-205ENST00000558036 TAOK3Q9H2K8 898 aa23.98■■□□□ 1.43
SNRPA1-205ENST00000558036 ZNF646O15015 1829 aaPredicted RBP23.97■■□□□ 1.43
SNRPA1-205ENST00000558036 NFKBIEO00221 500 aa23.97■■□□□ 1.43
SNRPA1-205ENST00000558036 CDC42EP5Q6NZY7 148 aa23.97■■□□□ 1.43
SNRPA1-205ENST00000558036 SLC44A5Q8NCS7 719 aa23.97■■□□□ 1.43
SNRPA1-205ENST00000558036 DDX4Q9NQI0 724 aaKnown RBP23.97■■□□□ 1.43
SNRPA1-205ENST00000558036 BRCA1P38398 1863 aaKnown RBP23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms