RNA–Protein interactions for RNA: ENST00000558026.1

IGKV2D-28-202, Transcript of immunoglobulin kappa variable 2D-28, humanhuman

BASIC

Gene IGKV2D-28, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-28-202ENST00000558026 RIPK4P57078 832 aa12.42□□□□□ -0.42
IGKV2D-28-202ENST00000558026 TFF2Q03403 129 aa12.42□□□□□ -0.42
IGKV2D-28-202ENST00000558026 ADGRE1Q14246 886 aa12.42□□□□□ -0.42
IGKV2D-28-202ENST00000558026 AKNAD1Q5T1N1 836 aa12.42□□□□□ -0.42
IGKV2D-28-202ENST00000558026 KHSRPQ92945 711 aaKnown RBP eCLIP12.42□□□□□ -0.42
IGKV2D-28-202ENST00000558026 GAS2L1Q99501 681 aaPredicted RBP12.42□□□□□ -0.42
IGKV2D-28-202ENST00000558026 SLC45A1Q9Y2W3 748 aa12.42□□□□□ -0.42
IGKV2D-28-202ENST00000558026 CHL1O00533 1208 aa12.41□□□□□ -0.42
IGKV2D-28-202ENST00000558026 KCNQ1P51787 676 aa12.41□□□□□ -0.42
IGKV2D-28-202ENST00000558026 TREML2Q5T2D2 321 aa12.41□□□□□ -0.42
IGKV2D-28-202ENST00000558026 UBE3BQ7Z3V4 1068 aa12.41□□□□□ -0.42
IGKV2D-28-202ENST00000558026 SH3RF1Q7Z6J0 888 aa12.41□□□□□ -0.42
IGKV2D-28-202ENST00000558026 TDRD7Q8NHU6 1098 aaKnown RBP12.41□□□□□ -0.42
IGKV2D-28-202ENST00000558026 TMOD2Q9NZR1 351 aa12.41□□□□□ -0.42
IGKV2D-28-202ENST00000558026 RPAP1Q9BWH6 1393 aaPredicted RBP12.41□□□□□ -0.42
IGKV2D-28-202ENST00000558026 PHIPQ8WWQ0 1821 aa12.4□□□□□ -0.42
IGKV2D-28-202ENST00000558026 TCP10Q12799 353 aa12.4□□□□□ -0.42
IGKV2D-28-202ENST00000558026 CCL14Q16627 93 aa12.4□□□□□ -0.42
IGKV2D-28-202ENST00000558026 APOBEC3HQ6NTF7 200 aaKnown RBP12.4□□□□□ -0.42
IGKV2D-28-202ENST00000558026 CCDC84Q86UT8 332 aaPredicted RBP12.4□□□□□ -0.42
IGKV2D-28-202ENST00000558026 TIFAQ96CG3 184 aa12.4□□□□□ -0.42
IGKV2D-28-202ENST00000558026 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.4□□□□□ -0.42
IGKV2D-28-202ENST00000558026 AFG3L2Q9Y4W6 797 aa12.4□□□□□ -0.42
IGKV2D-28-202ENST00000558026 RLFQ13129 1914 aa12.4□□□□□ -0.42
IGKV2D-28-202ENST00000558026 PLXNA1Q9UIW2 1896 aa12.4□□□□□ -0.42
IGKV2D-28-202ENST00000558026 XIRP2A4UGR9 3374 aa12.39□□□□□ -0.43
IGKV2D-28-202ENST00000558026 TRIM43BA6NCK2 446 aa12.39□□□□□ -0.43
IGKV2D-28-202ENST00000558026 TRIM75PA6NK02 468 aa12.39□□□□□ -0.43
IGKV2D-28-202ENST00000558026 PLIN1O60240 522 aa12.39□□□□□ -0.43
IGKV2D-28-202ENST00000558026 PEX10O60683 326 aa12.39□□□□□ -0.43
IGKV2D-28-202ENST00000558026 GPR37L1O60883 481 aa12.39□□□□□ -0.43
IGKV2D-28-202ENST00000558026 HOXB7P09629 217 aa12.39□□□□□ -0.43
IGKV2D-28-202ENST00000558026 PTPRAP18433 802 aa12.39□□□□□ -0.43
IGKV2D-28-202ENST00000558026 IGFBP4P22692 258 aa12.39□□□□□ -0.43
IGKV2D-28-202ENST00000558026 GYG1P46976 350 aa12.39□□□□□ -0.43
IGKV2D-28-202ENST00000558026 CWF19L2Q2TBE0 894 aaKnown RBP12.39□□□□□ -0.43
IGKV2D-28-202ENST00000558026 FKBP1CQ5VVH2 108 aa12.39□□□□□ -0.43
IGKV2D-28-202ENST00000558026 DUSP27Q5VZP5 1158 aa12.39□□□□□ -0.43
IGKV2D-28-202ENST00000558026 TEKT1Q969V4 418 aa12.39□□□□□ -0.43
IGKV2D-28-202ENST00000558026 TRIM43Q96BQ3 446 aaPredicted RBP12.39□□□□□ -0.43
IGKV2D-28-202ENST00000558026 TIMELESSQ9UNS1 1208 aa12.39□□□□□ -0.43
IGKV2D-28-202ENST00000558026 CHD9Q3L8U1 2897 aa12.38□□□□□ -0.43
IGKV2D-28-202ENST00000558026 ITGB8P26012 769 aa12.38□□□□□ -0.43
IGKV2D-28-202ENST00000558026 PBX2P40425 430 aa12.38□□□□□ -0.43
IGKV2D-28-202ENST00000558026 ZDHHC15Q96MV8 337 aa12.38□□□□□ -0.43
IGKV2D-28-202ENST00000558026 PDLIM7Q9NR12 457 aa12.38□□□□□ -0.43
IGKV2D-28-202ENST00000558026 CXXC1Q9P0U4 656 aaPredicted RBP12.38□□□□□ -0.43
IGKV2D-28-202ENST00000558026 IQSEC3Q9UPP2 1182 aaPredicted RBP12.38□□□□□ -0.43
IGKV2D-28-202ENST00000558026 AGTPBP1Q9UPW5 1226 aa12.38□□□□□ -0.43
IGKV2D-28-202ENST00000558026 MAP3K2Q9Y2U5 619 aa12.38□□□□□ -0.43
IGKV2D-28-202ENST00000558026 DAGLAQ9Y4D2 1042 aa12.38□□□□□ -0.43
IGKV2D-28-202ENST00000558026 SLURP2P0DP57 97 aa12.37□□□□□ -0.43
IGKV2D-28-202ENST00000558026 ZKSCAN1P17029 563 aaPredicted RBP12.37□□□□□ -0.43
IGKV2D-28-202ENST00000558026 NHLH1Q02575 133 aa12.37□□□□□ -0.43
IGKV2D-28-202ENST00000558026 CHAF1AQ13111 956 aaPredicted RBP12.37□□□□□ -0.43
IGKV2D-28-202ENST00000558026 TRIM60Q495X7 471 aa12.37□□□□□ -0.43
IGKV2D-28-202ENST00000558026 PICK1Q9NRD5 415 aa12.37□□□□□ -0.43
IGKV2D-28-202ENST00000558026 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.36□□□□□ -0.43
IGKV2D-28-202ENST00000558026 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.36□□□□□ -0.43
IGKV2D-28-202ENST00000558026 PHF20L1A8MW92 1017 aa12.36□□□□□ -0.43
IGKV2D-28-202ENST00000558026 SMIM22K7EJ46 135 aa12.36□□□□□ -0.43
IGKV2D-28-202ENST00000558026 HDLBPQ00341 1268 aaKnown RBP12.36□□□□□ -0.43
IGKV2D-28-202ENST00000558026 SCYL3Q8IZE3 742 aa12.36□□□□□ -0.43
IGKV2D-28-202ENST00000558026 FAM151AQ8WW52 585 aa12.36□□□□□ -0.43
IGKV2D-28-202ENST00000558026 ANKRD18BA2A2Z9 1011 aa12.35□□□□□ -0.43
IGKV2D-28-202ENST00000558026 GRXCR1A8MXD5 290 aa12.35□□□□□ -0.43
IGKV2D-28-202ENST00000558026 H7C1W4 665 aa12.35□□□□□ -0.43
IGKV2D-28-202ENST00000558026 CSF1RP07333 972 aa12.35□□□□□ -0.43
IGKV2D-28-202ENST00000558026 XRCC5P13010 732 aaKnown RBP12.35□□□□□ -0.43
IGKV2D-28-202ENST00000558026 HIBADHP31937 336 aaKnown RBP12.35□□□□□ -0.43
IGKV2D-28-202ENST00000558026 TMPOP42166 694 aaKnown RBP12.35□□□□□ -0.43
IGKV2D-28-202ENST00000558026 NFIAQ12857 509 aa12.35□□□□□ -0.43
IGKV2D-28-202ENST00000558026 SLC39A5Q6ZMH5 540 aa12.35□□□□□ -0.43
IGKV2D-28-202ENST00000558026 ZFPM1Q8IX07 1006 aa12.35□□□□□ -0.43
IGKV2D-28-202ENST00000558026 FAM84BQ96KN1 310 aaPredicted RBP12.35□□□□□ -0.43
IGKV2D-28-202ENST00000558026 NUDT12Q9BQG2 462 aa12.35□□□□□ -0.43
IGKV2D-28-202ENST00000558026 PNMA3Q9UL41 463 aa12.35□□□□□ -0.43
IGKV2D-28-202ENST00000558026 DOCK1Q14185 1865 aa12.35□□□□□ -0.43
IGKV2D-28-202ENST00000558026 NEURL1BA8MQ27 555 aa12.34□□□□□ -0.43
IGKV2D-28-202ENST00000558026 DNM1LO00429 736 aa12.34□□□□□ -0.43
IGKV2D-28-202ENST00000558026 GCLCP48506 637 aaPredicted RBP12.34□□□□□ -0.43
IGKV2D-28-202ENST00000558026 NEUROD2Q15784 382 aa12.34□□□□□ -0.43
IGKV2D-28-202ENST00000558026 GJC2Q5T442 439 aaPredicted RBP12.34□□□□□ -0.43
IGKV2D-28-202ENST00000558026 MICALL1Q8N3F8 863 aa12.34□□□□□ -0.43
IGKV2D-28-202ENST00000558026 PLA2G12BQ9BX93 195 aa12.34□□□□□ -0.43
IGKV2D-28-202ENST00000558026 CHD7Q9P2D1 2997 aa12.34□□□□□ -0.43
IGKV2D-28-202ENST00000558026 DOCK2Q92608 1830 aa12.34□□□□□ -0.43
IGKV2D-28-202ENST00000558026 ATRNL1Q5VV63 1379 aa12.33□□□□□ -0.44
IGKV2D-28-202ENST00000558026 PI4KAP2A4QPH2 592 aa12.33□□□□□ -0.44
IGKV2D-28-202ENST00000558026 ELL2O00472 640 aaPredicted RBP12.33□□□□□ -0.44
IGKV2D-28-202ENST00000558026 PI4KAP1Q8N8J0 262 aa12.33□□□□□ -0.44
IGKV2D-28-202ENST00000558026 USP6NLQ92738 828 aa12.33□□□□□ -0.44
IGKV2D-28-202ENST00000558026 ZNF594Q96JF6 807 aaPredicted RBP12.33□□□□□ -0.44
IGKV2D-28-202ENST00000558026 PBX4Q9BYU1 374 aa12.33□□□□□ -0.44
IGKV2D-28-202ENST00000558026 ASCC2Q9H1I8 757 aaPredicted RBP12.33□□□□□ -0.44
IGKV2D-28-202ENST00000558026 LRRC37A2A6NM11 1700 aa12.33□□□□□ -0.44
IGKV2D-28-202ENST00000558026 WDFY4Q6ZS81 3184 aa12.33□□□□□ -0.44
IGKV2D-28-202ENST00000558026 LOC285556D6RIA3 1793 aa12.33□□□□□ -0.44
IGKV2D-28-202ENST00000558026 DDX58O95786 925 aaKnown RBP12.32□□□□□ -0.44
IGKV2D-28-202ENST00000558026 CNGA1P29973 690 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms