RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 SKAP1Q86WV1 359 aa30.79■■■□□ 2.52
SMAD6-202ENST00000557916 MAPKAPK5Q8IW41 473 aa30.79■■■□□ 2.52
SMAD6-202ENST00000557916 AIDAQ96BJ3 306 aa30.79■■■□□ 2.52
SMAD6-202ENST00000557916 USP5P45974 858 aa30.78■■■□□ 2.52
SMAD6-202ENST00000557916 FKBP1BP68106 108 aa30.78■■■□□ 2.52
SMAD6-202ENST00000557916 ZSCAN29Q8IWY8 852 aaPredicted RBP30.78■■■□□ 2.52
SMAD6-202ENST00000557916 OSBP2Q969R2 916 aa30.78■■■□□ 2.52
SMAD6-202ENST00000557916 CRNKL1Q9BZJ0 848 aaKnown RBP30.78■■■□□ 2.52
SMAD6-202ENST00000557916 OSBPL5Q9H0X9 879 aaPredicted RBP30.78■■■□□ 2.52
SMAD6-202ENST00000557916 SSC5DA1L4H1 1573 aa30.78■■■□□ 2.52
SMAD6-202ENST00000557916 TICAM2Q86XR7 235 aa30.77■■■□□ 2.52
SMAD6-202ENST00000557916 HOOK2Q96ED9 719 aa30.77■■■□□ 2.52
SMAD6-202ENST00000557916 TLL2Q9Y6L7 1015 aa30.77■■■□□ 2.52
SMAD6-202ENST00000557916 FLT1P17948 1338 aa30.76■■■□□ 2.52
SMAD6-202ENST00000557916 PPP1R12BO60237 982 aaPredicted RBP30.76■■■□□ 2.51
SMAD6-202ENST00000557916 GSPT1P15170 499 aaKnown RBP30.76■■■□□ 2.51
SMAD6-202ENST00000557916 SH3BP5LQ7L8J4 393 aa30.76■■■□□ 2.51
SMAD6-202ENST00000557916 SAPCD2Q86UD0 394 aa30.76■■■□□ 2.51
SMAD6-202ENST00000557916 DDTLA6NHG4 134 aaPredicted RBP30.75■■■□□ 2.51
SMAD6-202ENST00000557916 ZMYM1Q5SVZ6 1142 aa30.75■■■□□ 2.51
SMAD6-202ENST00000557916 MOB2Q70IA6 237 aa30.75■■■□□ 2.51
SMAD6-202ENST00000557916 CSRNP1Q96S65 589 aa30.75■■■□□ 2.51
SMAD6-202ENST00000557916 FZD1Q9UP38 647 aa30.75■■■□□ 2.51
SMAD6-202ENST00000557916 ARMC9Q7Z3E5 817 aa30.74■■■□□ 2.51
SMAD6-202ENST00000557916 HUNKP57058 714 aa30.73■■■□□ 2.51
SMAD6-202ENST00000557916 SEC62Q99442 399 aaKnown RBP30.73■■■□□ 2.51
SMAD6-202ENST00000557916 ANGEL1Q9UNK9 670 aaKnown RBP30.73■■■□□ 2.51
SMAD6-202ENST00000557916 ATRNL1Q5VV63 1379 aa30.73■■■□□ 2.51
SMAD6-202ENST00000557916 PAPPA2Q9BXP8 1791 aa30.73■■■□□ 2.51
SMAD6-202ENST00000557916 UBE2Q2LH0YL09 131 aa30.73■■■□□ 2.51
SMAD6-202ENST00000557916 M0R2C6 588 aa30.73■■■□□ 2.51
SMAD6-202ENST00000557916 SDSP20132 328 aa30.73■■■□□ 2.51
SMAD6-202ENST00000557916 PRKAB2O43741 272 aa30.72■■■□□ 2.51
SMAD6-202ENST00000557916 USP2O75604 605 aaPredicted RBP30.72■■■□□ 2.51
SMAD6-202ENST00000557916 DCAF15Q66K64 600 aa30.72■■■□□ 2.51
SMAD6-202ENST00000557916 MIGA2Q7L4E1 593 aa30.72■■■□□ 2.51
SMAD6-202ENST00000557916 SDR42E1Q8WUS8 393 aa30.72■■■□□ 2.51
SMAD6-202ENST00000557916 STRBPQ96SI9 672 aaKnown RBP30.72■■■□□ 2.51
SMAD6-202ENST00000557916 DHX36Q9H2U1 1008 aaKnown RBP30.72■■■□□ 2.51
SMAD6-202ENST00000557916 CDK5RAP2Q96SN8 1893 aa30.71■■■□□ 2.51
SMAD6-202ENST00000557916 COL2A1P02458 1487 aaPredicted RBP30.71■■■□□ 2.51
SMAD6-202ENST00000557916 GPAA1O43292 621 aa30.71■■■□□ 2.51
SMAD6-202ENST00000557916 SAP30BPQ9UHR5 308 aaKnown RBP30.71■■■□□ 2.51
SMAD6-202ENST00000557916 SLC4A4Q9Y6R1 1079 aa30.71■■■□□ 2.51
SMAD6-202ENST00000557916 AK9Q5TCS8 1911 aa30.7■■■□□ 2.51
SMAD6-202ENST00000557916 RASSF10A6NK89 507 aa30.7■■■□□ 2.5
SMAD6-202ENST00000557916 IREB2P48200 963 aaKnown RBP30.7■■■□□ 2.5
SMAD6-202ENST00000557916 MAP3K11Q16584 847 aa30.7■■■□□ 2.5
SMAD6-202ENST00000557916 DEFB115Q30KQ5 88 aa30.7■■■□□ 2.5
SMAD6-202ENST00000557916 MKRN1Q9UHC7 482 aaKnown RBP30.7■■■□□ 2.5
SMAD6-202ENST00000557916 PALD1Q9ULE6 856 aa30.7■■■□□ 2.5
SMAD6-202ENST00000557916 FOCADQ5VW36 1801 aa30.7■■■□□ 2.5
SMAD6-202ENST00000557916 DCP1AQ9NPI6 582 aaPredicted RBP30.69■■■□□ 2.5
SMAD6-202ENST00000557916 HELLSQ9NRZ9 838 aa30.69■■■□□ 2.5
SMAD6-202ENST00000557916 ATP8A2Q9NTI2 1148 aa30.69■■■□□ 2.5
SMAD6-202ENST00000557916 NMIQ13287 307 aaPredicted RBP30.68■■■□□ 2.5
SMAD6-202ENST00000557916 HHIPL1Q96JK4 782 aa30.68■■■□□ 2.5
SMAD6-202ENST00000557916 FAM227BQ96M60 508 aa30.68■■■□□ 2.5
SMAD6-202ENST00000557916 HIP1O00291 1037 aa30.67■■■□□ 2.5
SMAD6-202ENST00000557916 LDLRAD1Q5T700 205 aa30.67■■■□□ 2.5
SMAD6-202ENST00000557916 ZNF341Q9BYN7 854 aa30.67■■■□□ 2.5
SMAD6-202ENST00000557916 DIAPH3Q9NSV4 1193 aa30.67■■■□□ 2.5
SMAD6-202ENST00000557916 A0A0D9SFI3 127 aa30.66■■■□□ 2.5
SMAD6-202ENST00000557916 GNAT2P19087 354 aa30.66■■■□□ 2.5
SMAD6-202ENST00000557916 PAXIP1Q6ZW49 1069 aaPredicted RBP30.66■■■□□ 2.5
SMAD6-202ENST00000557916 KLRG1Q96E93 195 aa30.66■■■□□ 2.5
SMAD6-202ENST00000557916 MCM9Q9NXL9 1143 aa30.66■■■□□ 2.5
SMAD6-202ENST00000557916 PI4KBQ9UBF8 816 aa30.66■■■□□ 2.5
SMAD6-202ENST00000557916 HLA-DOAP06340 250 aa30.65■■■□□ 2.5
SMAD6-202ENST00000557916 SLC4A8Q2Y0W8 1093 aa30.65■■■□□ 2.5
SMAD6-202ENST00000557916 MCMDC2Q4G0Z9 681 aa30.65■■■□□ 2.5
SMAD6-202ENST00000557916 DDRGK1Q96HY6 314 aa30.65■■■□□ 2.5
SMAD6-202ENST00000557916 MAP3K10Q02779 954 aa30.64■■■□□ 2.5
SMAD6-202ENST00000557916 RGMBQ6NW40 437 aa30.64■■■□□ 2.5
SMAD6-202ENST00000557916 CCDC129Q6ZRS4 1044 aa30.64■■■□□ 2.5
SMAD6-202ENST00000557916 TBC1D12O60347 775 aa30.64■■■□□ 2.49
SMAD6-202ENST00000557916 POLR3DP05423 398 aaPredicted RBP30.64■■■□□ 2.49
SMAD6-202ENST00000557916 SLURP2P0DP57 97 aa30.64■■■□□ 2.49
SMAD6-202ENST00000557916 MAP3K9P80192 1104 aa30.64■■■□□ 2.49
SMAD6-202ENST00000557916 TTC6Q86TZ1 520 aa30.64■■■□□ 2.49
SMAD6-202ENST00000557916 ANKRD13AQ8IZ07 590 aa30.64■■■□□ 2.49
SMAD6-202ENST00000557916 WRNIP1Q96S55 665 aa30.64■■■□□ 2.49
SMAD6-202ENST00000557916 UNCXA6NJT0 531 aa30.63■■■□□ 2.49
SMAD6-202ENST00000557916 GSG1L2A8MUP6 293 aa30.63■■■□□ 2.49
SMAD6-202ENST00000557916 ZNF157P51786 506 aaPredicted RBP30.63■■■□□ 2.49
SMAD6-202ENST00000557916 CWC27Q6UX04 472 aaKnown RBP30.63■■■□□ 2.49
SMAD6-202ENST00000557916 FOXP4Q8IVH2 680 aaPredicted RBP30.63■■■□□ 2.49
SMAD6-202ENST00000557916 DDX55Q8NHQ9 600 aaKnown RBP eCLIP30.63■■■□□ 2.49
SMAD6-202ENST00000557916 XPO5Q9HAV4 1204 aaKnown RBP eCLIP30.63■■■□□ 2.491e-8■■■■■ 47.9
SMAD6-202ENST00000557916 APPP05067 770 aa30.62■■■□□ 2.49
SMAD6-202ENST00000557916 BMP2KLQ5H9B9 411 aa30.62■■■□□ 2.49
SMAD6-202ENST00000557916 CYP4F22Q6NT55 531 aa30.62■■■□□ 2.49
SMAD6-202ENST00000557916 ZBTB4Q9P1Z0 1013 aaPredicted RBP30.62■■■□□ 2.49
SMAD6-202ENST00000557916 HERC5Q9UII4 1024 aaKnown RBP30.62■■■□□ 2.49
SMAD6-202ENST00000557916 ZNF112Q9UJU3 913 aa30.62■■■□□ 2.49
SMAD6-202ENST00000557916 MYH1P12882 1939 aa30.61■■■□□ 2.49
SMAD6-202ENST00000557916 NAV1Q8NEY1 1877 aa30.61■■■□□ 2.49
SMAD6-202ENST00000557916 FAM196BA6NMK8 535 aa30.61■■■□□ 2.49
SMAD6-202ENST00000557916 PATL2C9JE40 543 aaKnown RBP30.61■■■□□ 2.49
SMAD6-202ENST00000557916 GRM1Q13255 1194 aa30.61■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 141.2 ms