RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 TGFBRAP1Q8WUH2 860 aa17.14■□□□□ 0.33
ARHGEF40-208ENST00000557498 TCEANC2Q96MN5 208 aa17.14■□□□□ 0.33
ARHGEF40-208ENST00000557498 NEDD4P46934 1319 aa17.14■□□□□ 0.33
ARHGEF40-208ENST00000557498 WDR19Q8NEZ3 1342 aa17.14■□□□□ 0.33
ARHGEF40-208ENST00000557498 EXOSC10Q01780 885 aaKnown RBP17.13■□□□□ 0.33
ARHGEF40-208ENST00000557498 AGBL3Q8NEM8 1001 aa17.13■□□□□ 0.33
ARHGEF40-208ENST00000557498 TMX3Q96JJ7 454 aa17.13■□□□□ 0.33
ARHGEF40-208ENST00000557498 RNF41Q9H4P4 317 aaPredicted RBP17.13■□□□□ 0.33
ARHGEF40-208ENST00000557498 CNNM2Q9H8M5 875 aa17.13■□□□□ 0.33
ARHGEF40-208ENST00000557498 MCM9Q9NXL9 1143 aa17.13■□□□□ 0.33
ARHGEF40-208ENST00000557498 LIMCH1Q9UPQ0 1083 aa17.13■□□□□ 0.33
ARHGEF40-208ENST00000557498 FLT1P17948 1338 aa17.13■□□□□ 0.33
ARHGEF40-208ENST00000557498 MYH1P12882 1939 aa17.13■□□□□ 0.33
ARHGEF40-208ENST00000557498 DICER1Q9UPY3 1922 aaKnown RBP17.13■□□□□ 0.33
ARHGEF40-208ENST00000557498 CYP2D7A0A087X1C5 515 aa17.12■□□□□ 0.33
ARHGEF40-208ENST00000557498 USP17L8P0C7I0 530 aa17.12■□□□□ 0.33
ARHGEF40-208ENST00000557498 CYP2D6P10635 497 aa17.12■□□□□ 0.33
ARHGEF40-208ENST00000557498 MCM5P33992 734 aa17.12■□□□□ 0.33
ARHGEF40-208ENST00000557498 TOB2Q14106 344 aaPredicted RBP17.12■□□□□ 0.33
ARHGEF40-208ENST00000557498 TNIP1Q15025 636 aa17.12■□□□□ 0.33
ARHGEF40-208ENST00000557498 MFSD6Q6ZSS7 791 aa17.12■□□□□ 0.33
ARHGEF40-208ENST00000557498 ARHGAP27Q6ZUM4 889 aa17.12■□□□□ 0.33
ARHGEF40-208ENST00000557498 MAPKAPK5Q8IW41 473 aa17.12■□□□□ 0.33
ARHGEF40-208ENST00000557498 USP40Q9NVE5 1235 aa17.12■□□□□ 0.33
ARHGEF40-208ENST00000557498 HDAC9Q9UKV0 1011 aa17.12■□□□□ 0.33
ARHGEF40-208ENST00000557498 TACC3Q9Y6A5 838 aa17.12■□□□□ 0.33
ARHGEF40-208ENST00000557498 ROBO3Q96MS0 1386 aa17.12■□□□□ 0.33
ARHGEF40-208ENST00000557498 FZD9O00144 591 aa17.11■□□□□ 0.33
ARHGEF40-208ENST00000557498 PRC1O43663 620 aa17.11■□□□□ 0.33
ARHGEF40-208ENST00000557498 WDHD1O75717 1129 aaPredicted RBP17.11■□□□□ 0.33
ARHGEF40-208ENST00000557498 SLC3A2P08195 630 aaKnown RBP17.11■□□□□ 0.33
ARHGEF40-208ENST00000557498 PCP11498 1178 aaKnown RBP17.11■□□□□ 0.33
ARHGEF40-208ENST00000557498 RBM5P52756 815 aaKnown RBP eCLIP17.11■□□□□ 0.33
ARHGEF40-208ENST00000557498 ANTXR2P58335 489 aa17.11■□□□□ 0.33
ARHGEF40-208ENST00000557498 CFAP100Q494V2 611 aa17.11■□□□□ 0.33
ARHGEF40-208ENST00000557498 CDC42EP5Q6NZY7 148 aa17.11■□□□□ 0.33
ARHGEF40-208ENST00000557498 Q6ZUG5 572 aa17.11■□□□□ 0.33
ARHGEF40-208ENST00000557498 AMOTL1Q8IY63 956 aa17.11■□□□□ 0.33
ARHGEF40-208ENST00000557498 KRT23Q9C075 422 aa17.11■□□□□ 0.33
ARHGEF40-208ENST00000557498 ZBTB12Q9Y330 459 aaPredicted RBP17.11■□□□□ 0.33
ARHGEF40-208ENST00000557498 SBF1O95248 1867 aa17.11■□□□□ 0.33
ARHGEF40-208ENST00000557498 B4E1Z4 1266 aa17.1■□□□□ 0.33
ARHGEF40-208ENST00000557498 SMIM22K7EJ46 135 aa17.1■□□□□ 0.33
ARHGEF40-208ENST00000557498 HSP90AA1P07900 732 aaKnown RBP17.1■□□□□ 0.33
ARHGEF40-208ENST00000557498 EIF6P56537 245 aaKnown RBP17.1■□□□□ 0.33
ARHGEF40-208ENST00000557498 CUL4AQ13619 759 aa17.1■□□□□ 0.33
ARHGEF40-208ENST00000557498 C12orf60Q5U649 245 aa17.1■□□□□ 0.33
ARHGEF40-208ENST00000557498 FBXL16Q8N461 479 aa17.1■□□□□ 0.33
ARHGEF40-208ENST00000557498 SPRYD3Q8NCJ5 442 aa17.1■□□□□ 0.33
ARHGEF40-208ENST00000557498 ZSCAN31Q96LW9 406 aaPredicted RBP17.1■□□□□ 0.33
ARHGEF40-208ENST00000557498 LRRC2Q9BYS8 371 aa17.1■□□□□ 0.33
ARHGEF40-208ENST00000557498 AGXT2Q9BYV1 514 aa17.1■□□□□ 0.33
ARHGEF40-208ENST00000557498 INCENPQ9NQS7 918 aa17.1■□□□□ 0.33
ARHGEF40-208ENST00000557498 SH2B1Q9NRF2 756 aaPredicted RBP17.1■□□□□ 0.33
ARHGEF40-208ENST00000557498 PCDHAC2Q9Y5I4 1007 aa17.1■□□□□ 0.33
ARHGEF40-208ENST00000557498 POLR3DP05423 398 aaPredicted RBP17.09■□□□□ 0.33
ARHGEF40-208ENST00000557498 FGRP09769 529 aa17.09■□□□□ 0.33
ARHGEF40-208ENST00000557498 LMNB1P20700 586 aa17.09■□□□□ 0.33
ARHGEF40-208ENST00000557498 FGD1P98174 961 aa17.09■□□□□ 0.33
ARHGEF40-208ENST00000557498 EVX2Q03828 476 aa17.09■□□□□ 0.33
ARHGEF40-208ENST00000557498 CYB5R4Q7L1T6 521 aa17.09■□□□□ 0.33
ARHGEF40-208ENST00000557498 CHST3Q7LGC8 479 aa17.09■□□□□ 0.33
ARHGEF40-208ENST00000557498 STK11IPQ8N1F8 1099 aa17.09■□□□□ 0.33
ARHGEF40-208ENST00000557498 NKX2-3Q8TAU0 364 aa17.09■□□□□ 0.33
ARHGEF40-208ENST00000557498 LARP6Q9BRS8 491 aaKnown RBP17.09■□□□□ 0.33
ARHGEF40-208ENST00000557498 SAP30BPQ9UHR5 308 aaKnown RBP17.09■□□□□ 0.33
ARHGEF40-208ENST00000557498 TPCN1Q9ULQ1 816 aa17.09■□□□□ 0.33
ARHGEF40-208ENST00000557498 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.09■□□□□ 0.33
ARHGEF40-208ENST00000557498 ORC4O43929 436 aa17.08■□□□□ 0.32
ARHGEF40-208ENST00000557498 LARGE1O95461 756 aa17.08■□□□□ 0.32
ARHGEF40-208ENST00000557498 YBX3P16989 372 aaKnown RBP eCLIP17.08■□□□□ 0.32
ARHGEF40-208ENST00000557498 RPS12P25398 132 aaKnown RBP17.08■□□□□ 0.32
ARHGEF40-208ENST00000557498 PICALMQ13492 652 aa17.08■□□□□ 0.32
ARHGEF40-208ENST00000557498 RRP12Q5JTH9 1297 aaKnown RBP17.08■□□□□ 0.32
ARHGEF40-208ENST00000557498 OGFOD1Q8N543 542 aa17.08■□□□□ 0.32
ARHGEF40-208ENST00000557498 BRF1Q92994 677 aa17.08■□□□□ 0.32
ARHGEF40-208ENST00000557498 DDX4Q9NQI0 724 aaKnown RBP17.08■□□□□ 0.32
ARHGEF40-208ENST00000557498 TOMM22Q9NS69 142 aa17.08■□□□□ 0.32
ARHGEF40-208ENST00000557498 ZNF541Q9H0D2 1346 aa17.07■□□□□ 0.32
ARHGEF40-208ENST00000557498 KDM4AO75164 1064 aa17.07■□□□□ 0.32
ARHGEF40-208ENST00000557498 MMP14P50281 582 aa17.07■□□□□ 0.32
ARHGEF40-208ENST00000557498 PDE4BQ07343 736 aa17.07■□□□□ 0.32
ARHGEF40-208ENST00000557498 ME3Q16798 604 aa17.07■□□□□ 0.32
ARHGEF40-208ENST00000557498 MTMR14Q8NCE2 650 aa17.07■□□□□ 0.32
ARHGEF40-208ENST00000557498 ESR2Q92731 530 aa17.07■□□□□ 0.32
ARHGEF40-208ENST00000557498 TMEM87BQ96K49 555 aa17.07■□□□□ 0.32
ARHGEF40-208ENST00000557498 IDI2Q9BXS1 227 aa17.07■□□□□ 0.32
ARHGEF40-208ENST00000557498 OSBPL5Q9H0X9 879 aaPredicted RBP17.07■□□□□ 0.32
ARHGEF40-208ENST00000557498 SLKQ9H2G2 1235 aaPredicted RBP17.07■□□□□ 0.32
ARHGEF40-208ENST00000557498 FOXD4L1Q9NU39 408 aa17.07■□□□□ 0.32
ARHGEF40-208ENST00000557498 SPDYE2BA6NHP3 402 aa17.06■□□□□ 0.32
ARHGEF40-208ENST00000557498 SH2B2O14492 632 aaPredicted RBP17.06■□□□□ 0.32
ARHGEF40-208ENST00000557498 NPM3O75607 178 aaKnown RBP17.06■□□□□ 0.32
ARHGEF40-208ENST00000557498 SPDYE6P0CI01 402 aa17.06■□□□□ 0.32
ARHGEF40-208ENST00000557498 NT5C2P49902 561 aa17.06■□□□□ 0.32
ARHGEF40-208ENST00000557498 NFIAQ12857 509 aa17.06■□□□□ 0.32
ARHGEF40-208ENST00000557498 DLGAP5Q15398 846 aa17.06■□□□□ 0.32
ARHGEF40-208ENST00000557498 SLC4A8Q2Y0W8 1093 aa17.06■□□□□ 0.32
ARHGEF40-208ENST00000557498 INTS4Q96HW7 963 aaKnown RBP17.06■□□□□ 0.32
ARHGEF40-208ENST00000557498 PRMT6Q96LA8 375 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms