RNA–Protein interactions for RNA: ENST00000557422.1

RTN1-208, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-208ENST00000557422 TNPO2O14787 897 aaKnown RBP15.29■□□□□ 0.04
RTN1-208ENST00000557422 PTPRAP18433 802 aa15.29■□□□□ 0.04
RTN1-208ENST00000557422 MNX1P50219 401 aaPredicted RBP15.29■□□□□ 0.04
RTN1-208ENST00000557422 GADL1Q6ZQY3 521 aa15.29■□□□□ 0.04
RTN1-208ENST00000557422 SCYL3Q8IZE3 742 aa15.29■□□□□ 0.04
RTN1-208ENST00000557422 GDF15Q99988 308 aa15.29■□□□□ 0.04
RTN1-208ENST00000557422 PICK1Q9NRD5 415 aa15.29■□□□□ 0.04
RTN1-208ENST00000557422 USP40Q9NVE5 1235 aa15.29■□□□□ 0.04
RTN1-208ENST00000557422 SLC45A1Q9Y2W3 748 aa15.29■□□□□ 0.04
RTN1-208ENST00000557422 AFG3L2Q9Y4W6 797 aa15.29■□□□□ 0.04
RTN1-208ENST00000557422 ALPK3Q96L96 1907 aa15.29■□□□□ 0.04
RTN1-208ENST00000557422 ATRNL1Q5VV63 1379 aa15.28■□□□□ 0.04
RTN1-208ENST00000557422 DOCK3Q8IZD9 2030 aa15.28■□□□□ 0.04
RTN1-208ENST00000557422 BMP8BP34820 402 aa15.28■□□□□ 0.04
RTN1-208ENST00000557422 NECAB2Q7Z6G3 386 aa15.28■□□□□ 0.04
RTN1-208ENST00000557422 SLC5A1P13866 664 aa15.27■□□□□ 0.04
RTN1-208ENST00000557422 PRDX5P30044 214 aa15.27■□□□□ 0.04
RTN1-208ENST00000557422 GPR153Q6NV75 609 aa15.27■□□□□ 0.04
RTN1-208ENST00000557422 DIS3LQ8TF46 1054 aaKnown RBP15.27■□□□□ 0.04
RTN1-208ENST00000557422 LPIN2Q92539 896 aa15.27■□□□□ 0.04
RTN1-208ENST00000557422 TAOK2Q9UL54 1235 aa15.27■□□□□ 0.04
RTN1-208ENST00000557422 MYH13Q9UKX3 1938 aa15.27■□□□□ 0.03
RTN1-208ENST00000557422 LDHBP07195 334 aaKnown RBP15.26■□□□□ 0.03
RTN1-208ENST00000557422 MAP3K10Q02779 954 aa15.26■□□□□ 0.03
RTN1-208ENST00000557422 SH3BP5LQ7L8J4 393 aa15.26■□□□□ 0.03
RTN1-208ENST00000557422 DEFB123Q8N688 67 aa15.26■□□□□ 0.03
RTN1-208ENST00000557422 SMCR8Q8TEV9 937 aaPredicted RBP15.26■□□□□ 0.03
RTN1-208ENST00000557422 COA7Q96BR5 231 aa15.26■□□□□ 0.03
RTN1-208ENST00000557422 EYA2O00167 538 aa15.25■□□□□ 0.03
RTN1-208ENST00000557422 RGS3P49796 1198 aa15.25■□□□□ 0.03
RTN1-208ENST00000557422 C7orf61Q8IZ16 206 aa15.25■□□□□ 0.03
RTN1-208ENST00000557422 ANKRD13CQ8N6S4 541 aa15.25■□□□□ 0.03
RTN1-208ENST00000557422 IDI2Q9BXS1 227 aa15.25■□□□□ 0.03
RTN1-208ENST00000557422 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.25■□□□□ 0.03
RTN1-208ENST00000557422 ZMYND8Q9ULU4 1186 aaPredicted RBP15.25■□□□□ 0.03
RTN1-208ENST00000557422 PTPRFP10586 1907 aa15.25■□□□□ 0.03
RTN1-208ENST00000557422 TRIM75PA6NK02 468 aa15.24■□□□□ 0.03
RTN1-208ENST00000557422 CTNND1O60716 968 aaKnown RBP15.24■□□□□ 0.03
RTN1-208ENST00000557422 ENTPD3O75355 529 aa15.24■□□□□ 0.03
RTN1-208ENST00000557422 SLURP2P0DP57 97 aa15.24■□□□□ 0.03
RTN1-208ENST00000557422 Q7L0L9 218 aa15.24■□□□□ 0.03
RTN1-208ENST00000557422 ANKLE1Q8NAG6 615 aa15.24■□□□□ 0.03
RTN1-208ENST00000557422 AGTPBP1Q9UPW5 1226 aa15.24■□□□□ 0.03
RTN1-208ENST00000557422 LRRFIP2Q9Y608 721 aaKnown RBP15.24■□□□□ 0.03
RTN1-208ENST00000557422 DOCK2Q92608 1830 aa15.24■□□□□ 0.03
RTN1-208ENST00000557422 PHIPQ8WWQ0 1821 aa15.23■□□□□ 0.03
RTN1-208ENST00000557422 RFX5P48382 616 aaPredicted RBP15.23■□□□□ 0.03
RTN1-208ENST00000557422 LRIT3Q3SXY7 679 aa15.23■□□□□ 0.03
RTN1-208ENST00000557422 ATG9AQ7Z3C6 839 aa15.23■□□□□ 0.03
RTN1-208ENST00000557422 ZSCAN29Q8IWY8 852 aaPredicted RBP15.23■□□□□ 0.03
RTN1-208ENST00000557422 USP44Q9H0E7 712 aa15.23■□□□□ 0.03
RTN1-208ENST00000557422 MTMR10Q9NXD2 777 aa15.23■□□□□ 0.03
RTN1-208ENST00000557422 STXBP5LQ9Y2K9 1186 aa15.23■□□□□ 0.03
RTN1-208ENST00000557422 SALL1Q9NSC2 1324 aa15.22■□□□□ 0.03
RTN1-208ENST00000557422 DDTLA6NHG4 134 aaPredicted RBP15.22■□□□□ 0.03
RTN1-208ENST00000557422 HMGCRP04035 888 aa15.22■□□□□ 0.03
RTN1-208ENST00000557422 FAM110CQ1W6H9 321 aa15.22■□□□□ 0.03
RTN1-208ENST00000557422 TREML2Q5T2D2 321 aa15.22■□□□□ 0.03
RTN1-208ENST00000557422 CCDC84Q86UT8 332 aaPredicted RBP15.22■□□□□ 0.03
RTN1-208ENST00000557422 NBPF3Q9H094 633 aa15.22■□□□□ 0.03
RTN1-208ENST00000557422 GNL3LQ9NVN8 582 aaKnown RBP15.22■□□□□ 0.03
RTN1-208ENST00000557422 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.22■□□□□ 0.03
RTN1-208ENST00000557422 GJD2Q9UKL4 321 aa15.22■□□□□ 0.03
RTN1-208ENST00000557422 RFX7Q2KHR2 1363 aa15.22■□□□□ 0.03
RTN1-208ENST00000557422 RPTORQ8N122 1335 aa15.21■□□□□ 0.03
RTN1-208ENST00000557422 SYN1P17600 705 aa15.21■□□□□ 0.03
RTN1-208ENST00000557422 MAGEA10P43363 369 aaPredicted RBP15.21■□□□□ 0.03
RTN1-208ENST00000557422 TRIM32Q13049 653 aa15.21■□□□□ 0.03
RTN1-208ENST00000557422 HMX1Q9NP08 348 aaPredicted RBP15.21■□□□□ 0.03
RTN1-208ENST00000557422 DENND2AQ9ULE3 1009 aa15.21■□□□□ 0.03
RTN1-208ENST00000557422 MYH2Q9UKX2 1941 aa15.21■□□□□ 0.02
RTN1-208ENST00000557422 DOCK1Q14185 1865 aa15.2■□□□□ 0.02
RTN1-208ENST00000557422 GAKO14976 1311 aa15.2■□□□□ 0.02
RTN1-208ENST00000557422 PHKA1P46020 1223 aa15.2■□□□□ 0.02
RTN1-208ENST00000557422 ATP2B3Q16720 1220 aa15.2■□□□□ 0.02
RTN1-208ENST00000557422 TDHQ8IZJ6 230 aa15.2■□□□□ 0.02
RTN1-208ENST00000557422 MRPL50Q8N5N7 158 aaKnown RBP15.2■□□□□ 0.02
RTN1-208ENST00000557422 DDX4Q9NQI0 724 aaKnown RBP15.2■□□□□ 0.02
RTN1-208ENST00000557422 PNMA3Q9UL41 463 aa15.2■□□□□ 0.02
RTN1-208ENST00000557422 SEMA3EO15041 775 aa15.19■□□□□ 0.02
RTN1-208ENST00000557422 GCLCP48506 637 aaPredicted RBP15.19■□□□□ 0.02
RTN1-208ENST00000557422 PROCA1Q8NCQ7 364 aaPredicted RBP15.19■□□□□ 0.02
RTN1-208ENST00000557422 C11orf49Q9H6J7 331 aa15.19■□□□□ 0.02
RTN1-208ENST00000557422 MRS2Q9HD23 443 aa15.19■□□□□ 0.02
RTN1-208ENST00000557422 CEP126Q9P2H0 1117 aa15.19■□□□□ 0.02
RTN1-208ENST00000557422 SPP2Q13103 211 aa15.18■□□□□ 0.02
RTN1-208ENST00000557422 PICALMQ13492 652 aa15.18■□□□□ 0.02
RTN1-208ENST00000557422 FAM163AQ96GL9 167 aaPredicted RBP15.18■□□□□ 0.02
RTN1-208ENST00000557422 UBE2OQ9C0C9 1292 aaKnown RBP15.18■□□□□ 0.02
RTN1-208ENST00000557422 SIL1Q9H173 461 aa15.18■□□□□ 0.02
RTN1-208ENST00000557422 OGDHLQ9ULD0 1010 aa15.18■□□□□ 0.02
RTN1-208ENST00000557422 PTPRCP08575 1304 aa15.17■□□□□ 0.02
RTN1-208ENST00000557422 DDX60LQ5H9U9 1706 aaKnown RBP15.17■□□□□ 0.02
RTN1-208ENST00000557422 ZBTB22O15209 634 aa15.17■□□□□ 0.02
RTN1-208ENST00000557422 TBC1D12O60347 775 aa15.17■□□□□ 0.02
RTN1-208ENST00000557422 CIAO1O76071 339 aa15.17■□□□□ 0.02
RTN1-208ENST00000557422 DZIP1Q86YF9 867 aaKnown RBP15.17■□□□□ 0.02
RTN1-208ENST00000557422 ZGPATQ8N5A5 531 aaKnown RBP15.17■□□□□ 0.02
RTN1-208ENST00000557422 ZNF280CQ8ND82 737 aa15.17■□□□□ 0.02
RTN1-208ENST00000557422 ASCC2Q9H1I8 757 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms