RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 TTC41PQ6P2S7 1318 aa9.52□□□□□ -0.89
PSEN1-222ENST00000557356 MYH13Q9UKX3 1938 aa9.51□□□□□ -0.89
PSEN1-222ENST00000557356 GOLIM4O00461 696 aa9.51□□□□□ -0.89
PSEN1-222ENST00000557356 RHBDL3P58872 404 aa9.51□□□□□ -0.89
PSEN1-222ENST00000557356 MAP3K10Q02779 954 aa9.51□□□□□ -0.89
PSEN1-222ENST00000557356 SLC9C2Q5TAH2 1124 aa9.51□□□□□ -0.89
PSEN1-222ENST00000557356 ERO1BQ86YB8 467 aa9.51□□□□□ -0.89
PSEN1-222ENST00000557356 MAGEB6Q8N7X4 407 aa9.51□□□□□ -0.89
PSEN1-222ENST00000557356 WRNIP1Q96S55 665 aa9.51□□□□□ -0.89
PSEN1-222ENST00000557356 DNAJC2Q99543 621 aaKnown RBP9.51□□□□□ -0.89
PSEN1-222ENST00000557356 TRIM34Q9BYJ4 488 aa9.51□□□□□ -0.89
PSEN1-222ENST00000557356 BOLA2Q9H3K6 86 aa9.51□□□□□ -0.89
PSEN1-222ENST00000557356 PIH1D3Q9NQM4 214 aaKnown RBP9.51□□□□□ -0.89
PSEN1-222ENST00000557356 PI4KBQ9UBF8 816 aa9.51□□□□□ -0.89
PSEN1-222ENST00000557356 ZNF112Q9UJU3 913 aa9.51□□□□□ -0.89
PSEN1-222ENST00000557356 AOX1Q06278 1338 aa9.51□□□□□ -0.89
PSEN1-222ENST00000557356 ECM29Q5VYK3 1845 aa9.5□□□□□ -0.89
PSEN1-222ENST00000557356 FOXN1O15353 648 aa9.5□□□□□ -0.89
PSEN1-222ENST00000557356 SMARCA5O60264 1052 aaPredicted RBP9.5□□□□□ -0.89
PSEN1-222ENST00000557356 CTNND1O60716 968 aaKnown RBP9.5□□□□□ -0.89
PSEN1-222ENST00000557356 GLRX3O76003 335 aaKnown RBP9.5□□□□□ -0.89
PSEN1-222ENST00000557356 HLA-DOAP06340 250 aa9.5□□□□□ -0.89
PSEN1-222ENST00000557356 ZFYP08048 801 aaPredicted RBP9.5□□□□□ -0.89
PSEN1-222ENST00000557356 USP5P45974 858 aa9.5□□□□□ -0.89
PSEN1-222ENST00000557356 GTF2A2P52657 109 aa9.5□□□□□ -0.89
PSEN1-222ENST00000557356 PPATQ06203 517 aa9.5□□□□□ -0.89
PSEN1-222ENST00000557356 NFIAQ12857 509 aa9.5□□□□□ -0.89
PSEN1-222ENST00000557356 PICALMQ13492 652 aa9.5□□□□□ -0.89
PSEN1-222ENST00000557356 ANKRD45Q5TZF3 282 aa9.5□□□□□ -0.89
PSEN1-222ENST00000557356 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.5□□□□□ -0.89
PSEN1-222ENST00000557356 MIGA2Q7L4E1 593 aa9.5□□□□□ -0.89
PSEN1-222ENST00000557356 TTC6Q86TZ1 520 aa9.5□□□□□ -0.89
PSEN1-222ENST00000557356 TICAM2Q86XR7 235 aa9.5□□□□□ -0.89
PSEN1-222ENST00000557356 ZNF384Q8TF68 577 aa9.5□□□□□ -0.89
PSEN1-222ENST00000557356 DDRGK1Q96HY6 314 aa9.5□□□□□ -0.89
PSEN1-222ENST00000557356 WNK4Q96J92 1243 aa9.5□□□□□ -0.89
PSEN1-222ENST00000557356 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.5□□□□□ -0.89
PSEN1-222ENST00000557356 PICK1Q9NRD5 415 aa9.5□□□□□ -0.89
PSEN1-222ENST00000557356 GINM1Q9NU53 330 aa9.5□□□□□ -0.89
PSEN1-222ENST00000557356 AATFQ9NY61 560 aaKnown RBP eCLIP9.5□□□□□ -0.89
PSEN1-222ENST00000557356 HERC5Q9UII4 1024 aaKnown RBP9.5□□□□□ -0.89
PSEN1-222ENST00000557356 ATRNL1Q5VV63 1379 aa9.5□□□□□ -0.89
PSEN1-222ENST00000557356 MAGEB6P1A0A0J9YX57 407 aa9.49□□□□□ -0.89
PSEN1-222ENST00000557356 VGLL4Q14135 290 aa9.49□□□□□ -0.89
PSEN1-222ENST00000557356 UBE3CQ15386 1083 aa9.49□□□□□ -0.89
PSEN1-222ENST00000557356 NOL9Q5SY16 702 aaKnown RBP9.49□□□□□ -0.89
PSEN1-222ENST00000557356 SH3RF3Q8TEJ3 882 aaPredicted RBP9.49□□□□□ -0.89
PSEN1-222ENST00000557356 TGFBRAP1Q8WUH2 860 aa9.49□□□□□ -0.89
PSEN1-222ENST00000557356 OPTNQ96CV9 577 aa9.49□□□□□ -0.89
PSEN1-222ENST00000557356 TBC1D2Q9BYX2 928 aa9.49□□□□□ -0.89
PSEN1-222ENST00000557356 CRNKL1Q9BZJ0 848 aaKnown RBP9.49□□□□□ -0.89
PSEN1-222ENST00000557356 OSBPL5Q9H0X9 879 aaPredicted RBP9.49□□□□□ -0.89
PSEN1-222ENST00000557356 ANTXR1Q9H6X2 564 aa9.49□□□□□ -0.89
PSEN1-222ENST00000557356 RNF186Q9NXI6 227 aa9.49□□□□□ -0.89
PSEN1-222ENST00000557356 COL2A1P02458 1487 aaPredicted RBP9.48□□□□□ -0.89
PSEN1-222ENST00000557356 SPDYE5A6NIY4 337 aa9.48□□□□□ -0.89
PSEN1-222ENST00000557356 TRPA1O75762 1119 aa9.48□□□□□ -0.89
PSEN1-222ENST00000557356 CETPP11597 493 aa9.48□□□□□ -0.89
PSEN1-222ENST00000557356 PDE6AP16499 860 aa9.48□□□□□ -0.89
PSEN1-222ENST00000557356 MX1P20591 662 aa9.48□□□□□ -0.89
PSEN1-222ENST00000557356 LBX1P52954 281 aa9.48□□□□□ -0.89
PSEN1-222ENST00000557356 SNAPC2Q13487 334 aa9.48□□□□□ -0.89
PSEN1-222ENST00000557356 NOM1Q5C9Z4 860 aaKnown RBP9.48□□□□□ -0.89
PSEN1-222ENST00000557356 SMC5Q8IY18 1101 aa9.48□□□□□ -0.89
PSEN1-222ENST00000557356 AMOTL1Q8IY63 956 aa9.48□□□□□ -0.89
PSEN1-222ENST00000557356 EXOC6Q8TAG9 804 aa9.48□□□□□ -0.89
PSEN1-222ENST00000557356 CLMNQ96JQ2 1002 aa9.48□□□□□ -0.89
PSEN1-222ENST00000557356 CFHR5Q9BXR6 569 aa9.48□□□□□ -0.89
PSEN1-222ENST00000557356 ELP3Q9H9T3 547 aa9.48□□□□□ -0.89
PSEN1-222ENST00000557356 ZCCHC17Q9NP64 241 aaKnown RBP9.48□□□□□ -0.89
PSEN1-222ENST00000557356 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.48□□□□□ -0.89
PSEN1-222ENST00000557356 MYH2Q9UKX2 1941 aa9.47□□□□□ -0.89
PSEN1-222ENST00000557356 TESPA1A2RU30 521 aaPredicted RBP9.47□□□□□ -0.89
PSEN1-222ENST00000557356 DDTLA6NHG4 134 aaPredicted RBP9.47□□□□□ -0.89
PSEN1-222ENST00000557356 CXCL11O14625 94 aa9.47□□□□□ -0.89
PSEN1-222ENST00000557356 HSPA8P11142 646 aaKnown RBP9.47□□□□□ -0.89
PSEN1-222ENST00000557356 ADD2P35612 726 aa9.47□□□□□ -0.89
PSEN1-222ENST00000557356 PPIL2Q13356 520 aa9.47□□□□□ -0.89
PSEN1-222ENST00000557356 ARHGEF6Q15052 776 aa9.47□□□□□ -0.89
PSEN1-222ENST00000557356 IFNL1Q8IU54 200 aa9.47□□□□□ -0.89
PSEN1-222ENST00000557356 ZFPM1Q8IX07 1006 aa9.47□□□□□ -0.89
PSEN1-222ENST00000557356 SCYL3Q8IZE3 742 aa9.47□□□□□ -0.89
PSEN1-222ENST00000557356 CRACR2BQ8N4Y2 399 aaPredicted RBP9.47□□□□□ -0.89
PSEN1-222ENST00000557356 KBTBD3Q8NAB2 608 aa9.47□□□□□ -0.89
PSEN1-222ENST00000557356 ZKSCAN4Q969J2 545 aaPredicted RBP9.47□□□□□ -0.89
PSEN1-222ENST00000557356 OTUD5Q96G74 571 aa9.47□□□□□ -0.89
PSEN1-222ENST00000557356 ZIC5Q96T25 663 aa9.47□□□□□ -0.89
PSEN1-222ENST00000557356 DDX4Q9NQI0 724 aaKnown RBP9.47□□□□□ -0.89
PSEN1-222ENST00000557356 ATP8A2Q9NTI2 1148 aa9.47□□□□□ -0.89
PSEN1-222ENST00000557356 FZD1Q9UP38 647 aa9.47□□□□□ -0.89
PSEN1-222ENST00000557356 ZNF532Q9HCE3 1301 aa9.47□□□□□ -0.89
PSEN1-222ENST00000557356 RFX7Q2KHR2 1363 aa9.47□□□□□ -0.89
PSEN1-222ENST00000557356 SSC5DA1L4H1 1573 aa9.46□□□□□ -0.89
PSEN1-222ENST00000557356 PHF20L1A8MW92 1017 aa9.46□□□□□ -0.9
PSEN1-222ENST00000557356 POLR3DP05423 398 aaPredicted RBP9.46□□□□□ -0.9
PSEN1-222ENST00000557356 GNAT2P19087 354 aa9.46□□□□□ -0.9
PSEN1-222ENST00000557356 INPP5BP32019 993 aa9.46□□□□□ -0.9
PSEN1-222ENST00000557356 C1QBPQ07021 282 aaKnown RBP9.46□□□□□ -0.9
PSEN1-222ENST00000557356 MKRN3Q13064 507 aaKnown RBP9.46□□□□□ -0.9
PSEN1-222ENST00000557356 SH3BP5LQ7L8J4 393 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms