RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 MAP3K9P80192 1104 aa15.15■□□□□ 0.02
SLIRP-209ENST00000557342 KIF23Q02241 960 aaPredicted RBP15.15■□□□□ 0.02
SLIRP-209ENST00000557342 PICALMQ13492 652 aa15.15■□□□□ 0.02
SLIRP-209ENST00000557342 ANKRD45Q5TZF3 282 aa15.15■□□□□ 0.02
SLIRP-209ENST00000557342 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.15■□□□□ 0.02
SLIRP-209ENST00000557342 CSADQ9Y600 493 aa15.15■□□□□ 0.02
SLIRP-209ENST00000557342 TTC41PQ6P2S7 1318 aa15.15■□□□□ 0.02
SLIRP-209ENST00000557342 COL2A1P02458 1487 aaPredicted RBP15.14■□□□□ 0.01
SLIRP-209ENST00000557342 ERC2O15083 957 aa15.14■□□□□ 0.01
SLIRP-209ENST00000557342 CA12O43570 354 aa15.14■□□□□ 0.01
SLIRP-209ENST00000557342 SLC9C2Q5TAH2 1124 aa15.14■□□□□ 0.01
SLIRP-209ENST00000557342 ADGRA1Q86SQ6 560 aa15.14■□□□□ 0.01
SLIRP-209ENST00000557342 ZFPM1Q8IX07 1006 aa15.14■□□□□ 0.01
SLIRP-209ENST00000557342 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.14■□□□□ 0.011e-8■■■■■ 34
SLIRP-209ENST00000557342 SH3RF3Q8TEJ3 882 aaPredicted RBP15.14■□□□□ 0.01
SLIRP-209ENST00000557342 CSRNP1Q96S65 589 aa15.14■□□□□ 0.01
SLIRP-209ENST00000557342 DDX4Q9NQI0 724 aaKnown RBP15.14■□□□□ 0.01
SLIRP-209ENST00000557342 ATRNL1Q5VV63 1379 aa15.13■□□□□ 0.01
SLIRP-209ENST00000557342 ZBTB48P10074 688 aaPredicted RBP15.13■□□□□ 0.01
SLIRP-209ENST00000557342 PDE6AP16499 860 aa15.13■□□□□ 0.01
SLIRP-209ENST00000557342 SPRYD7Q5W111 196 aa15.13■□□□□ 0.01
SLIRP-209ENST00000557342 ZSCAN25Q6NSZ9 544 aa15.13■□□□□ 0.01
SLIRP-209ENST00000557342 MIGA2Q7L4E1 593 aa15.13■□□□□ 0.01
SLIRP-209ENST00000557342 CLMNQ96JQ2 1002 aa15.13■□□□□ 0.01
SLIRP-209ENST00000557342 WRNIP1Q96S55 665 aa15.13■□□□□ 0.01
SLIRP-209ENST00000557342 OSBPL5Q9H0X9 879 aaPredicted RBP15.13■□□□□ 0.01
SLIRP-209ENST00000557342 CTCFP49711 727 aaPredicted RBP15.12■□□□□ 0.01
SLIRP-209ENST00000557342 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.12■□□□□ 0.01
SLIRP-209ENST00000557342 SMC5Q8IY18 1101 aa15.12■□□□□ 0.01
SLIRP-209ENST00000557342 TGFBRAP1Q8WUH2 860 aa15.12■□□□□ 0.01
SLIRP-209ENST00000557342 EDC3Q96F86 508 aaKnown RBP15.12■□□□□ 0.01
SLIRP-209ENST00000557342 WNK4Q96J92 1243 aa15.12■□□□□ 0.01
SLIRP-209ENST00000557342 ZIC5Q96T25 663 aa15.12■□□□□ 0.01
SLIRP-209ENST00000557342 DHX36Q9H2U1 1008 aaKnown RBP15.12■□□□□ 0.01
SLIRP-209ENST00000557342 ZNF532Q9HCE3 1301 aa15.12■□□□□ 0.01
SLIRP-209ENST00000557342 NAV1Q8NEY1 1877 aa15.12■□□□□ 0.01
SLIRP-209ENST00000557342 ATAD5Q96QE3 1844 aa15.11■□□□□ 0.01
SLIRP-209ENST00000557342 MAGEB6P1A0A0J9YX57 407 aa15.11■□□□□ 0.01
SLIRP-209ENST00000557342 DDTLA6NHG4 134 aaPredicted RBP15.11■□□□□ 0.01
SLIRP-209ENST00000557342 FOXN1O15353 648 aa15.11■□□□□ 0.01
SLIRP-209ENST00000557342 GLRX3O76003 335 aaKnown RBP15.11■□□□□ 0.01
SLIRP-209ENST00000557342 MX1P20591 662 aa15.11■□□□□ 0.01
SLIRP-209ENST00000557342 INHBEP58166 350 aa15.11■□□□□ 0.01
SLIRP-209ENST00000557342 DYNLL1P63167 89 aaKnown RBP15.11■□□□□ 0.01
SLIRP-209ENST00000557342 IRX6P78412 446 aaPredicted RBP15.11■□□□□ 0.01
SLIRP-209ENST00000557342 SREBF2Q12772 1141 aa15.11■□□□□ 0.01
SLIRP-209ENST00000557342 VGLL4Q14135 290 aa15.11■□□□□ 0.01
SLIRP-209ENST00000557342 SH3BP5LQ7L8J4 393 aa15.11■□□□□ 0.01
SLIRP-209ENST00000557342 MIGA1Q8NAN2 632 aa15.11■□□□□ 0.01
SLIRP-209ENST00000557342 ELP3Q9H9T3 547 aa15.11■□□□□ 0.01
SLIRP-209ENST00000557342 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.11■□□□□ 0.01
SLIRP-209ENST00000557342 ZNF112Q9UJU3 913 aa15.11■□□□□ 0.01
SLIRP-209ENST00000557342 DOCK1Q14185 1865 aa15.11■□□□□ 0.01
SLIRP-209ENST00000557342 MANSC4A6NHS7 340 aaPredicted RBP15.1■□□□□ 0.01
SLIRP-209ENST00000557342 TBC1D12O60347 775 aa15.1■□□□□ 0.01
SLIRP-209ENST00000557342 IGHDP01880 384 aa15.1■□□□□ 0.01
SLIRP-209ENST00000557342 ADD2P35612 726 aa15.1■□□□□ 0.01
SLIRP-209ENST00000557342 USP5P45974 858 aa15.1■□□□□ 0.01
SLIRP-209ENST00000557342 TM4SF4P48230 202 aa15.1■□□□□ 0.01
SLIRP-209ENST00000557342 MAP3K10Q02779 954 aa15.1■□□□□ 0.01
SLIRP-209ENST00000557342 MKRN3Q13064 507 aaKnown RBP15.1■□□□□ 0.01
SLIRP-209ENST00000557342 LRRFIP1Q32MZ4 808 aaKnown RBP15.1■□□□□ 0.01
SLIRP-209ENST00000557342 OPTNQ96CV9 577 aa15.1■□□□□ 0.01
SLIRP-209ENST00000557342 SAGE1Q9NXZ1 904 aa15.1■□□□□ 0.01
SLIRP-209ENST00000557342 FLT1P17948 1338 aa15.1■□□□□ 0.01
SLIRP-209ENST00000557342 SIPA1L1O43166 1804 aa15.09■□□□□ 0.01
SLIRP-209ENST00000557342 TCRBV5S4A2TA0A5A2 114 aa15.09■□□□□ 0.01
SLIRP-209ENST00000557342 UBE3CQ15386 1083 aa15.09■□□□□ 0.01
SLIRP-209ENST00000557342 TSHZ3Q63HK5 1081 aa15.09■□□□□ 0.01
SLIRP-209ENST00000557342 ERO1BQ86YB8 467 aa15.09■□□□□ 0.01
SLIRP-209ENST00000557342 MAPKAPK5Q8IW41 473 aa15.09■□□□□ 0.01
SLIRP-209ENST00000557342 KBTBD3Q8NAB2 608 aa15.09■□□□□ 0.01
SLIRP-209ENST00000557342 RIOK1Q9BRS2 568 aaKnown RBP15.09■□□□□ 0.01
SLIRP-209ENST00000557342 CRNKL1Q9BZJ0 848 aaKnown RBP15.09■□□□□ 0.01
SLIRP-209ENST00000557342 PI4KBQ9UBF8 816 aa15.09■□□□□ 0.01
SLIRP-209ENST00000557342 SNCAIPQ9Y6H5 919 aa15.09■□□□□ 0.01
SLIRP-209ENST00000557342 SPDYE5A6NIY4 337 aa15.08■□□□□ 0
SLIRP-209ENST00000557342 HLA-DOAP06340 250 aa15.08■□□□□ 0
SLIRP-209ENST00000557342 CENPBP07199 599 aaPredicted RBP15.08■□□□□ 0
SLIRP-209ENST00000557342 INPP5BP32019 993 aa15.08■□□□□ 0
SLIRP-209ENST00000557342 NOL9Q5SY16 702 aaKnown RBP15.08■□□□□ 0
SLIRP-209ENST00000557342 B4GALNT3Q6L9W6 998 aa15.08■□□□□ 0
SLIRP-209ENST00000557342 PI4K2BQ8TCG2 481 aa15.08■□□□□ 0
SLIRP-209ENST00000557342 OTUD7AQ8TE49 926 aaPredicted RBP15.08■□□□□ 0
SLIRP-209ENST00000557342 ZKSCAN4Q969J2 545 aaPredicted RBP15.08■□□□□ 0
SLIRP-209ENST00000557342 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.08■□□□□ 0
SLIRP-209ENST00000557342 STAP2Q9UGK3 403 aa15.08■□□□□ 0
SLIRP-209ENST00000557342 HERC5Q9UII4 1024 aaKnown RBP15.08■□□□□ 0
SLIRP-209ENST00000557342 SALL3Q9BXA9 1300 aa15.08■□□□□ 0
SLIRP-209ENST00000557342 DDX60LQ5H9U9 1706 aaKnown RBP15.07■□□□□ 0
SLIRP-209ENST00000557342 PHF20L1A8MW92 1017 aa15.07■□□□□ 0
SLIRP-209ENST00000557342 ZFYP08048 801 aaPredicted RBP15.07■□□□□ 0
SLIRP-209ENST00000557342 HSPA8P11142 646 aaKnown RBP15.07■□□□□ 0
SLIRP-209ENST00000557342 NUCB1Q02818 461 aa15.07■□□□□ 0
SLIRP-209ENST00000557342 PPATQ06203 517 aa15.07■□□□□ 0
SLIRP-209ENST00000557342 CHD1LQ86WJ1 897 aa15.07■□□□□ 0
SLIRP-209ENST00000557342 FOXP4Q8IVH2 680 aaPredicted RBP15.07■□□□□ 0
SLIRP-209ENST00000557342 OTUD5Q96G74 571 aa15.07■□□□□ 0
SLIRP-209ENST00000557342 TRIM34Q9BYJ4 488 aa15.07■□□□□ 0
SLIRP-209ENST00000557342 LNPKQ9C0E8 428 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms