RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 ZHX2Q9Y6X8 837 aa15.82■□□□□ 0.12
PSEN1-221ENST00000557293 SLC4A10Q6U841 1118 aa15.81■□□□□ 0.12
PSEN1-221ENST00000557293 Q7L0L9 218 aa15.81■□□□□ 0.12
PSEN1-221ENST00000557293 SH3BP5LQ7L8J4 393 aa15.81■□□□□ 0.12
PSEN1-221ENST00000557293 CUL9Q8IWT3 2517 aa15.81■□□□□ 0.12
PSEN1-221ENST00000557293 KIF16BQ96L93 1317 aa15.81■□□□□ 0.12
PSEN1-221ENST00000557293 SLC45A1Q9Y2W3 748 aa15.81■□□□□ 0.12
PSEN1-221ENST00000557293 FASTKD5Q7L8L6 764 aaKnown RBP15.8■□□□□ 0.12
PSEN1-221ENST00000557293 DEFB123Q8N688 67 aa15.8■□□□□ 0.12
PSEN1-221ENST00000557293 WDR66Q8TBY9 1149 aa15.8■□□□□ 0.12
PSEN1-221ENST00000557293 USP40Q9NVE5 1235 aa15.8■□□□□ 0.12
PSEN1-221ENST00000557293 MTMR10Q9NXD2 777 aa15.8■□□□□ 0.12
PSEN1-221ENST00000557293 TNPO2O14787 897 aaKnown RBP15.79■□□□□ 0.12
PSEN1-221ENST00000557293 PRDX5P30044 214 aa15.79■□□□□ 0.12
PSEN1-221ENST00000557293 LRIT3Q3SXY7 679 aa15.79■□□□□ 0.12
PSEN1-221ENST00000557293 NECAB2Q7Z6G3 386 aa15.79■□□□□ 0.12
PSEN1-221ENST00000557293 SCYL3Q8IZE3 742 aa15.79■□□□□ 0.12
PSEN1-221ENST00000557293 ZMYND8Q9ULU4 1186 aaPredicted RBP15.79■□□□□ 0.12
PSEN1-221ENST00000557293 STXBP5LQ9Y2K9 1186 aa15.79■□□□□ 0.12
PSEN1-221ENST00000557293 IFIT1P09914 478 aaKnown RBP15.78■□□□□ 0.12
PSEN1-221ENST00000557293 RFX5P48382 616 aaPredicted RBP15.78■□□□□ 0.12
PSEN1-221ENST00000557293 GADL1Q6ZQY3 521 aa15.78■□□□□ 0.12
PSEN1-221ENST00000557293 C7orf61Q8IZ16 206 aa15.78■□□□□ 0.12
PSEN1-221ENST00000557293 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.78■□□□□ 0.121e-9■■■■■ 54.1
PSEN1-221ENST00000557293 GJD2Q9UKL4 321 aa15.78■□□□□ 0.12
PSEN1-221ENST00000557293 AK9Q5TCS8 1911 aa15.77■□□□□ 0.12
PSEN1-221ENST00000557293 TRIM32Q13049 653 aa15.77■□□□□ 0.12
PSEN1-221ENST00000557293 PUM3Q15397 648 aaKnown RBP15.77■□□□□ 0.12
PSEN1-221ENST00000557293 CCDC84Q86UT8 332 aaPredicted RBP15.77■□□□□ 0.12
PSEN1-221ENST00000557293 IDI2Q9BXS1 227 aa15.77■□□□□ 0.12
PSEN1-221ENST00000557293 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.77■□□□□ 0.12
PSEN1-221ENST00000557293 SALL2Q9Y467 1007 aaPredicted RBP15.77■□□□□ 0.12
PSEN1-221ENST00000557293 LAMA3Q16787 3333 aa15.76■□□□□ 0.11
PSEN1-221ENST00000557293 DDTLA6NHG4 134 aaPredicted RBP15.76■□□□□ 0.11
PSEN1-221ENST00000557293 SYN1P17600 705 aa15.76■□□□□ 0.11
PSEN1-221ENST00000557293 MAGEA10P43363 369 aaPredicted RBP15.76■□□□□ 0.11
PSEN1-221ENST00000557293 RGS3P49796 1198 aa15.76■□□□□ 0.11
PSEN1-221ENST00000557293 ATG9AQ7Z3C6 839 aa15.76■□□□□ 0.11
PSEN1-221ENST00000557293 ANKRD13CQ8N6S4 541 aa15.76■□□□□ 0.11
PSEN1-221ENST00000557293 ANKLE1Q8NAG6 615 aa15.76■□□□□ 0.11
PSEN1-221ENST00000557293 COL25A1Q9BXS0 654 aaPredicted RBP15.76■□□□□ 0.11
PSEN1-221ENST00000557293 PHIPQ8WWQ0 1821 aa15.75■□□□□ 0.11
PSEN1-221ENST00000557293 PTPRFP10586 1907 aa15.75■□□□□ 0.11
PSEN1-221ENST00000557293 CTNND1O60716 968 aaKnown RBP15.75■□□□□ 0.11
PSEN1-221ENST00000557293 ENTPD3O75355 529 aa15.75■□□□□ 0.11
PSEN1-221ENST00000557293 TREML2Q5T2D2 321 aa15.75■□□□□ 0.11
PSEN1-221ENST00000557293 LPIN2Q92539 896 aa15.75■□□□□ 0.11
PSEN1-221ENST00000557293 COA7Q96BR5 231 aa15.75■□□□□ 0.11
PSEN1-221ENST00000557293 USP44Q9H0E7 712 aa15.75■□□□□ 0.11
PSEN1-221ENST00000557293 DDX4Q9NQI0 724 aaKnown RBP15.75■□□□□ 0.11
PSEN1-221ENST00000557293 PICK1Q9NRD5 415 aa15.75■□□□□ 0.11
PSEN1-221ENST00000557293 RFX7Q2KHR2 1363 aa15.75■□□□□ 0.11
PSEN1-221ENST00000557293 EYA2O00167 538 aa15.74■□□□□ 0.11
PSEN1-221ENST00000557293 LDHBP07195 334 aaKnown RBP15.74■□□□□ 0.11
PSEN1-221ENST00000557293 NBPF3Q9H094 633 aa15.74■□□□□ 0.11
PSEN1-221ENST00000557293 TAOK2Q9UL54 1235 aa15.74■□□□□ 0.11
PSEN1-221ENST00000557293 AGTPBP1Q9UPW5 1226 aa15.74■□□□□ 0.11
PSEN1-221ENST00000557293 RPTORQ8N122 1335 aa15.73■□□□□ 0.11
PSEN1-221ENST00000557293 SALL1Q9NSC2 1324 aa15.73■□□□□ 0.11
PSEN1-221ENST00000557293 TRIM75PA6NK02 468 aa15.73■□□□□ 0.11
PSEN1-221ENST00000557293 SLC5A1P13866 664 aa15.73■□□□□ 0.11
PSEN1-221ENST00000557293 FAM110CQ1W6H9 321 aa15.73■□□□□ 0.11
PSEN1-221ENST00000557293 TDHQ8IZJ6 230 aa15.73■□□□□ 0.11
PSEN1-221ENST00000557293 SMCR8Q8TEV9 937 aaPredicted RBP15.73■□□□□ 0.11
PSEN1-221ENST00000557293 OGDHLQ9ULD0 1010 aa15.73■□□□□ 0.11
PSEN1-221ENST00000557293 GAKO14976 1311 aa15.72■□□□□ 0.11
PSEN1-221ENST00000557293 HMGCRP04035 888 aa15.72■□□□□ 0.11
PSEN1-221ENST00000557293 C11orf49Q9H6J7 331 aa15.72■□□□□ 0.11
PSEN1-221ENST00000557293 HMX1Q9NP08 348 aaPredicted RBP15.72■□□□□ 0.11
PSEN1-221ENST00000557293 LRRFIP2Q9Y608 721 aaKnown RBP15.72■□□□□ 0.11
PSEN1-221ENST00000557293 PFASO15067 1338 aa15.71■□□□□ 0.11
PSEN1-221ENST00000557293 ZBTB22O15209 634 aa15.71■□□□□ 0.11
PSEN1-221ENST00000557293 ZEB1P37275 1124 aaPredicted RBP15.71■□□□□ 0.11
PSEN1-221ENST00000557293 PHKA1P46020 1223 aa15.71■□□□□ 0.11
PSEN1-221ENST00000557293 RRP1BQ14684 758 aaKnown RBP15.71■□□□□ 0.11
PSEN1-221ENST00000557293 MAP3K21Q5TCX8 1036 aa15.71■□□□□ 0.11
PSEN1-221ENST00000557293 MRPL50Q8N5N7 158 aaKnown RBP15.71■□□□□ 0.11
PSEN1-221ENST00000557293 FAM163AQ96GL9 167 aaPredicted RBP15.71■□□□□ 0.11
PSEN1-221ENST00000557293 POTEB2H3BUK9 544 aa15.7■□□□□ 0.1
PSEN1-221ENST00000557293 TBC1D12O60347 775 aa15.7■□□□□ 0.1
PSEN1-221ENST00000557293 COL6A1P12109 1028 aa15.7■□□□□ 0.1
PSEN1-221ENST00000557293 PROCA1Q8NCQ7 364 aaPredicted RBP15.7■□□□□ 0.1
PSEN1-221ENST00000557293 TRIB2Q92519 343 aa15.7■□□□□ 0.1
PSEN1-221ENST00000557293 PLXNB2O15031 1838 aa15.7■□□□□ 0.1
PSEN1-221ENST00000557293 DOCK2Q92608 1830 aa15.69■□□□□ 0.1
PSEN1-221ENST00000557293 MYH13Q9UKX3 1938 aa15.69■□□□□ 0.1
PSEN1-221ENST00000557293 GCLCP48506 637 aaPredicted RBP15.69■□□□□ 0.1
PSEN1-221ENST00000557293 SPP2Q13103 211 aa15.69■□□□□ 0.1
PSEN1-221ENST00000557293 ZSCAN29Q8IWY8 852 aaPredicted RBP15.69■□□□□ 0.1
PSEN1-221ENST00000557293 ZNF384Q8TF68 577 aa15.69■□□□□ 0.1
PSEN1-221ENST00000557293 UBE2OQ9C0C9 1292 aaKnown RBP15.69■□□□□ 0.1
PSEN1-221ENST00000557293 ASCC2Q9H1I8 757 aaPredicted RBP15.69■□□□□ 0.1
PSEN1-221ENST00000557293 DENND2AQ9ULE3 1009 aa15.69■□□□□ 0.1
PSEN1-221ENST00000557293 DDX60LQ5H9U9 1706 aaKnown RBP15.68■□□□□ 0.1
PSEN1-221ENST00000557293 DOCK1Q14185 1865 aa15.68■□□□□ 0.1
PSEN1-221ENST00000557293 FAM196BA6NMK8 535 aa15.68■□□□□ 0.1
PSEN1-221ENST00000557293 PEX10O60683 326 aa15.68■□□□□ 0.1
PSEN1-221ENST00000557293 RHBDL3P58872 404 aa15.68■□□□□ 0.1
PSEN1-221ENST00000557293 ATP2B3Q16720 1220 aa15.68■□□□□ 0.1
PSEN1-221ENST00000557293 SH3D19Q5HYK7 790 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms