RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 CCDC196A0A1B0GTZ2 297 aa17.66■□□□□ 0.42
TMEM55B-207ENST00000557041 RIOK3O14730 519 aaKnown RBP17.66■□□□□ 0.42
TMEM55B-207ENST00000557041 PPARAQ07869 468 aa17.66■□□□□ 0.42
TMEM55B-207ENST00000557041 PTPN14Q15678 1187 aa17.66■□□□□ 0.42
TMEM55B-207ENST00000557041 CCDC144BQ3MJ40 725 aa17.66■□□□□ 0.42
TMEM55B-207ENST00000557041 DNAJC5Q9H3Z4 198 aa17.66■□□□□ 0.42
TMEM55B-207ENST00000557041 F8W031 263 aaPredicted RBP17.66■□□□□ 0.42
TMEM55B-207ENST00000557041 TRMT44Q8IYL2 757 aaKnown RBP17.66■□□□□ 0.42
TMEM55B-207ENST00000557041 CTCFLQ8NI51 663 aaPredicted RBP17.66■□□□□ 0.42
TMEM55B-207ENST00000557041 ALDH8A1Q9H2A2 487 aaPredicted RBP17.66■□□□□ 0.42
TMEM55B-207ENST00000557041 EPB41L4AQ9HCS5 686 aaPredicted RBP17.66■□□□□ 0.42
TMEM55B-207ENST00000557041 HOOK1Q9UJC3 728 aaKnown RBP17.66■□□□□ 0.42
TMEM55B-207ENST00000557041 ZMYM6O95789 1325 aa17.65■□□□□ 0.42
TMEM55B-207ENST00000557041 COBLO75128 1261 aa17.65■□□□□ 0.42
TMEM55B-207ENST00000557041 EIF5P55010 431 aaKnown RBP17.65■□□□□ 0.42
TMEM55B-207ENST00000557041 NLRP5P59047 1200 aa17.65■□□□□ 0.42
TMEM55B-207ENST00000557041 ZNF174Q15697 407 aa17.65■□□□□ 0.42
TMEM55B-207ENST00000557041 WASF1Q92558 559 aa17.65■□□□□ 0.42
TMEM55B-207ENST00000557041 BRMS1Q9HCU9 246 aa17.65■□□□□ 0.42
TMEM55B-207ENST00000557041 RTEL1Q9NZ71 1219 aa17.65■□□□□ 0.42
TMEM55B-207ENST00000557041 CBX1P83916 185 aa17.65■□□□□ 0.42
TMEM55B-207ENST00000557041 SAMD1Q6SPF0 538 aaPredicted RBP17.65■□□□□ 0.42
TMEM55B-207ENST00000557041 ZNF654Q8IZM8 581 aa17.65■□□□□ 0.42
TMEM55B-207ENST00000557041 TNKSO95271 1327 aa17.65■□□□□ 0.42
TMEM55B-207ENST00000557041 UBASH3AP57075 661 aa17.64■□□□□ 0.42
TMEM55B-207ENST00000557041 PTF1AQ7RTS3 328 aa17.64■□□□□ 0.42
TMEM55B-207ENST00000557041 CCDC34Q96HJ3 373 aa17.64■□□□□ 0.42
TMEM55B-207ENST00000557041 PLIN2Q99541 437 aa17.64■□□□□ 0.42
TMEM55B-207ENST00000557041 XPO4Q9C0E2 1151 aaKnown RBP17.64■□□□□ 0.42
TMEM55B-207ENST00000557041 SAP30BPQ9UHR5 308 aaKnown RBP17.64■□□□□ 0.42
TMEM55B-207ENST00000557041 KCNH3Q9ULD8 1083 aa17.64■□□□□ 0.42
TMEM55B-207ENST00000557041 GSG1L2A8MUP6 293 aa17.64■□□□□ 0.41
TMEM55B-207ENST00000557041 ERVV-1B6SEH8 477 aa17.64■□□□□ 0.41
TMEM55B-207ENST00000557041 ZNF219Q9P2Y4 722 aaPredicted RBP17.64■□□□□ 0.41
TMEM55B-207ENST00000557041 KIAA1524Q8TCG1 905 aa17.64■□□□□ 0.41
TMEM55B-207ENST00000557041 FOXP2O15409 715 aa17.63■□□□□ 0.41
TMEM55B-207ENST00000557041 NMT2O60551 498 aa17.63■□□□□ 0.41
TMEM55B-207ENST00000557041 WDHD1O75717 1129 aaPredicted RBP17.63■□□□□ 0.41
TMEM55B-207ENST00000557041 RPS8P62241 208 aaKnown RBP17.63■□□□□ 0.41
TMEM55B-207ENST00000557041 AMOTL1Q8IY63 956 aa17.63■□□□□ 0.41
TMEM55B-207ENST00000557041 CCNL1Q9UK58 526 aaPredicted RBP17.63■□□□□ 0.41
TMEM55B-207ENST00000557041 ATP1A3P13637 1013 aa17.63■□□□□ 0.41
TMEM55B-207ENST00000557041 C3orf67Q6ZVT6 689 aa17.63■□□□□ 0.41
TMEM55B-207ENST00000557041 ILDR1Q86SU0 546 aaPredicted RBP17.63■□□□□ 0.41
TMEM55B-207ENST00000557041 ZNF34Q8IZ26 560 aa17.63■□□□□ 0.41
TMEM55B-207ENST00000557041 INTS5Q6P9B9 1019 aaKnown RBP17.63■□□□□ 0.41
TMEM55B-207ENST00000557041 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.63■□□□□ 0.41
TMEM55B-207ENST00000557041 HIBADHP31937 336 aaKnown RBP17.62■□□□□ 0.41
TMEM55B-207ENST00000557041 FANCBQ8NB91 859 aa17.62■□□□□ 0.41
TMEM55B-207ENST00000557041 SMTNL1A8MU46 457 aa17.62■□□□□ 0.41
TMEM55B-207ENST00000557041 C6orf229H3BNL8 230 aa17.62■□□□□ 0.41
TMEM55B-207ENST00000557041 YEATS4O95619 227 aa17.62■□□□□ 0.41
TMEM55B-207ENST00000557041 KLRK1P26718 216 aa17.62■□□□□ 0.41
TMEM55B-207ENST00000557041 PRDX5P30044 214 aa17.62■□□□□ 0.41
TMEM55B-207ENST00000557041 TPTE2Q6XPS3 522 aa17.62■□□□□ 0.41
TMEM55B-207ENST00000557041 SMARCC1Q92922 1105 aaPredicted RBP17.62■□□□□ 0.41
TMEM55B-207ENST00000557041 PLA2G12BQ9BX93 195 aa17.62■□□□□ 0.41
TMEM55B-207ENST00000557041 LY9Q9HBG7 655 aa17.62■□□□□ 0.41
TMEM55B-207ENST00000557041 MAPK8IP1Q9UQF2 711 aa17.62■□□□□ 0.41
TMEM55B-207ENST00000557041 RTCBQ9Y3I0 505 aaKnown RBP17.62■□□□□ 0.41
TMEM55B-207ENST00000557041 CDHR2Q9BYE9 1310 aa17.62■□□□□ 0.41
TMEM55B-207ENST00000557041 FOXN1O15353 648 aa17.62■□□□□ 0.41
TMEM55B-207ENST00000557041 SNW1Q13573 536 aaKnown RBP17.62■□□□□ 0.41
TMEM55B-207ENST00000557041 KRI1Q8N9T8 703 aaKnown RBP17.62■□□□□ 0.41
TMEM55B-207ENST00000557041 TDRD7Q8NHU6 1098 aaKnown RBP17.62■□□□□ 0.41
TMEM55B-207ENST00000557041 OXER1Q8TDS5 423 aa17.62■□□□□ 0.41
TMEM55B-207ENST00000557041 CASP1P29466 404 aa17.61■□□□□ 0.41
TMEM55B-207ENST00000557041 TBC1D9BQ66K14 1250 aa17.61■□□□□ 0.41
TMEM55B-207ENST00000557041 VWA3AA6NCI4 1184 aa17.61■□□□□ 0.41
TMEM55B-207ENST00000557041 DYNC1I1O14576 645 aa17.61■□□□□ 0.41
TMEM55B-207ENST00000557041 MCM7P33993 719 aa17.61■□□□□ 0.41
TMEM55B-207ENST00000557041 CEP135Q66GS9 1140 aa17.61■□□□□ 0.41
TMEM55B-207ENST00000557041 FMR1NBQ8N0W7 255 aaPredicted RBP17.61■□□□□ 0.41
TMEM55B-207ENST00000557041 CYP2D6P10635 497 aa17.6■□□□□ 0.41
TMEM55B-207ENST00000557041 LONRF3Q496Y0 759 aa17.6■□□□□ 0.41
TMEM55B-207ENST00000557041 NOSTRINQ8IVI9 506 aa17.6■□□□□ 0.41
TMEM55B-207ENST00000557041 CAMTA2O94983 1202 aa17.6■□□□□ 0.41
TMEM55B-207ENST00000557041 TOP1P11387 765 aaKnown RBP17.6■□□□□ 0.41
TMEM55B-207ENST00000557041 GNAT2P19087 354 aa17.6■□□□□ 0.41
TMEM55B-207ENST00000557041 AK7Q96M32 723 aa17.6■□□□□ 0.41
TMEM55B-207ENST00000557041 CRNKL1Q9BZJ0 848 aaKnown RBP17.6■□□□□ 0.41
TMEM55B-207ENST00000557041 PCDHB6Q9Y5E3 794 aa17.6■□□□□ 0.41
TMEM55B-207ENST00000557041 CDC25AP30304 524 aa17.6■□□□□ 0.41
TMEM55B-207ENST00000557041 SLC39A14Q15043 492 aa17.6■□□□□ 0.41
TMEM55B-207ENST00000557041 ATL3Q6DD88 541 aa17.6■□□□□ 0.41
TMEM55B-207ENST00000557041 SMARCE1Q969G3 411 aa17.6■□□□□ 0.41
TMEM55B-207ENST00000557041 UIMC1Q96RL1 719 aa17.6■□□□□ 0.41
TMEM55B-207ENST00000557041 PCDHA5Q9Y5H7 936 aa17.6■□□□□ 0.41
TMEM55B-207ENST00000557041 KDM3BQ7LBC6 1761 aa17.59■□□□□ 0.41
TMEM55B-207ENST00000557041 FAM205CA6NFA0 338 aa17.59■□□□□ 0.41
TMEM55B-207ENST00000557041 NAA30Q147X3 362 aaPredicted RBP17.59■□□□□ 0.41
TMEM55B-207ENST00000557041 IGDCC4Q8TDY8 1250 aa17.59■□□□□ 0.41
TMEM55B-207ENST00000557041 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.59■□□□□ 0.41
TMEM55B-207ENST00000557041 NBPF3Q9H094 633 aa17.59■□□□□ 0.41
TMEM55B-207ENST00000557041 PDCL3Q9H2J4 239 aa17.59■□□□□ 0.41
TMEM55B-207ENST00000557041 SERTAD1Q9UHV2 236 aa17.59■□□□□ 0.41
TMEM55B-207ENST00000557041 MARCH6O60337 910 aa17.59■□□□□ 0.41
TMEM55B-207ENST00000557041 CAVIN2O95810 425 aa17.59■□□□□ 0.41
TMEM55B-207ENST00000557041 RFX7Q2KHR2 1363 aa17.59■□□□□ 0.41
TMEM55B-207ENST00000557041 ADGRA1Q86SQ6 560 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms