RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 PARK7Q99497 189 aaKnown RBP7.52□□□□□ -1.21
ATXN3-245ENST00000556958 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.52□□□□□ -1.211e-11■■■■□ 25.2
ATXN3-245ENST00000556958 HMX1Q9NP08 348 aaPredicted RBP7.52□□□□□ -1.21
ATXN3-245ENST00000556958 SEC31BQ9NQW1 1179 aa7.52□□□□□ -1.21
ATXN3-245ENST00000556958 PRKAG2Q9UGJ0 569 aa7.52□□□□□ -1.21
ATXN3-245ENST00000556958 GABRQQ9UN88 632 aa7.52□□□□□ -1.21
ATXN3-245ENST00000556958 MED23Q9ULK4 1368 aa7.51□□□□□ -1.21
ATXN3-245ENST00000556958 IRF6O14896 467 aa7.51□□□□□ -1.21
ATXN3-245ENST00000556958 TNNI2P48788 182 aa7.51□□□□□ -1.21
ATXN3-245ENST00000556958 RBM5P52756 815 aaKnown RBP eCLIP7.51□□□□□ -1.21
ATXN3-245ENST00000556958 PPIL2Q13356 520 aa7.51□□□□□ -1.21
ATXN3-245ENST00000556958 CFAP100Q494V2 611 aa7.51□□□□□ -1.21
ATXN3-245ENST00000556958 COA7Q96BR5 231 aa7.51□□□□□ -1.21
ATXN3-245ENST00000556958 HOOK2Q96ED9 719 aa7.51□□□□□ -1.21
ATXN3-245ENST00000556958 PRMT6Q96LA8 375 aaPredicted RBP7.51□□□□□ -1.21
ATXN3-245ENST00000556958 LRFN3Q9BTN0 628 aa7.51□□□□□ -1.21
ATXN3-245ENST00000556958 RSPH6AQ9H0K4 717 aa7.51□□□□□ -1.21
ATXN3-245ENST00000556958 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.51□□□□□ -1.21
ATXN3-245ENST00000556958 LEMD3Q9Y2U8 911 aa7.51□□□□□ -1.21
ATXN3-245ENST00000556958 KDM3BQ7LBC6 1761 aa7.51□□□□□ -1.21
ATXN3-245ENST00000556958 MUC3AQ02505 3323 aa7.5□□□□□ -1.21
ATXN3-245ENST00000556958 TNPO2O14787 897 aaKnown RBP7.5□□□□□ -1.21
ATXN3-245ENST00000556958 NEFMP07197 916 aa7.5□□□□□ -1.21
ATXN3-245ENST00000556958 PPATQ06203 517 aa7.5□□□□□ -1.21
ATXN3-245ENST00000556958 TRIM28Q13263 835 aaKnown RBP7.5□□□□□ -1.21
ATXN3-245ENST00000556958 RTL5Q5HYW3 569 aaPredicted RBP7.5□□□□□ -1.21
ATXN3-245ENST00000556958 TMEM31Q5JXX7 168 aa7.5□□□□□ -1.21
ATXN3-245ENST00000556958 CFAP53Q96M91 514 aa7.5□□□□□ -1.21
ATXN3-245ENST00000556958 CDC5LQ99459 802 aaKnown RBP7.5□□□□□ -1.21
ATXN3-245ENST00000556958 TTYH1Q9H313 450 aaPredicted RBP7.5□□□□□ -1.21
ATXN3-245ENST00000556958 THEGQ9P2T0 379 aa7.5□□□□□ -1.21
ATXN3-245ENST00000556958 OGDHLQ9ULD0 1010 aa7.5□□□□□ -1.21
ATXN3-245ENST00000556958 SSC5DA1L4H1 1573 aa7.5□□□□□ -1.21
ATXN3-245ENST00000556958 TRIM6-TRIM34B2RNG4 842 aa7.49□□□□□ -1.21
ATXN3-245ENST00000556958 BCRP11274 1271 aa7.49□□□□□ -1.21
ATXN3-245ENST00000556958 CCT4P50991 539 aaKnown RBP7.49□□□□□ -1.21
ATXN3-245ENST00000556958 TREML4Q6UXN2 200 aa7.49□□□□□ -1.21
ATXN3-245ENST00000556958 ZBTB38Q8NAP3 1195 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-245ENST00000556958 PLBD2Q8NHP8 589 aa7.49□□□□□ -1.21
ATXN3-245ENST00000556958 ZNF428Q96B54 188 aa7.49□□□□□ -1.21
ATXN3-245ENST00000556958 MTRQ99707 1265 aa7.49□□□□□ -1.21
ATXN3-245ENST00000556958 ISCA1Q9BUE6 129 aa7.49□□□□□ -1.21
ATXN3-245ENST00000556958 BSDC1Q9NW68 430 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-245ENST00000556958 MINPP1Q9UNW1 487 aa7.49□□□□□ -1.21
ATXN3-245ENST00000556958 KCNH4Q9UQ05 1017 aa7.49□□□□□ -1.21
ATXN3-245ENST00000556958 F8W031 263 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-245ENST00000556958 ATP5J2-PTCD1G3V325 749 aa7.48□□□□□ -1.21
ATXN3-245ENST00000556958 PDE8AO60658 829 aa7.48□□□□□ -1.21
ATXN3-245ENST00000556958 HMGCRP04035 888 aa7.48□□□□□ -1.21
ATXN3-245ENST00000556958 ANXA1P04083 346 aa7.48□□□□□ -1.21
ATXN3-245ENST00000556958 U2AF1L5P0DN76 240 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-245ENST00000556958 MRE11P49959 708 aa7.48□□□□□ -1.21
ATXN3-245ENST00000556958 U2AF1Q01081 240 aaKnown RBP eCLIP7.48□□□□□ -1.21
ATXN3-245ENST00000556958 FOXK2Q01167 660 aa7.48□□□□□ -1.21
ATXN3-245ENST00000556958 CAMK2BQ13554 666 aa7.48□□□□□ -1.21
ATXN3-245ENST00000556958 SHHQ15465 462 aa7.48□□□□□ -1.21
ATXN3-245ENST00000556958 PROSER3Q2NL68 480 aa7.48□□□□□ -1.21
ATXN3-245ENST00000556958 TPRNQ4KMQ1 711 aa7.48□□□□□ -1.21
ATXN3-245ENST00000556958 TYW1BQ6NUM6 668 aa7.48□□□□□ -1.21
ATXN3-245ENST00000556958 TRIM67Q6ZTA4 783 aa7.48□□□□□ -1.21
ATXN3-245ENST00000556958 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-245ENST00000556958 USP38Q8NB14 1042 aa7.48□□□□□ -1.21
ATXN3-245ENST00000556958 WRNIP1Q96S55 665 aa7.48□□□□□ -1.21
ATXN3-245ENST00000556958 IL21Q9HBE4 155 aa7.48□□□□□ -1.21
ATXN3-245ENST00000556958 ZNF70Q9UC06 446 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-245ENST00000556958 SNCAIPQ9Y6H5 919 aa7.48□□□□□ -1.21
ATXN3-245ENST00000556958 LOC100996750A0A140TA64 210 aa7.47□□□□□ -1.21
ATXN3-245ENST00000556958 PRKCSHP14314 528 aaPredicted RBP7.47□□□□□ -1.21
ATXN3-245ENST00000556958 PPP4CP60510 307 aa7.47□□□□□ -1.21
ATXN3-245ENST00000556958 FKBP1AP62942 108 aaKnown RBP7.47□□□□□ -1.21
ATXN3-245ENST00000556958 AKNAD1Q5T1N1 836 aa7.47□□□□□ -1.21
ATXN3-245ENST00000556958 RIC3Q7Z5B4 369 aa7.47□□□□□ -1.21
ATXN3-245ENST00000556958 PPM1EQ8WY54 764 aa7.47□□□□□ -1.21
ATXN3-245ENST00000556958 ZNF516Q92618 1163 aa7.47□□□□□ -1.21
ATXN3-245ENST00000556958 TEPSINQ96N21 525 aa7.47□□□□□ -1.21
ATXN3-245ENST00000556958 GAS2L1Q99501 681 aaPredicted RBP7.47□□□□□ -1.21
ATXN3-245ENST00000556958 KRTAP4-6Q9BYQ5 205 aa7.47□□□□□ -1.21
ATXN3-245ENST00000556958 ANKRD2Q9GZV1 360 aa7.47□□□□□ -1.21
ATXN3-245ENST00000556958 CD209Q9NNX6 404 aa7.47□□□□□ -1.21
ATXN3-245ENST00000556958 ZNF646O15015 1829 aaPredicted RBP7.46□□□□□ -1.21
ATXN3-245ENST00000556958 TCP10L2B9ZVM9 353 aa7.46□□□□□ -1.22
ATXN3-245ENST00000556958 TULP1O00294 542 aaPredicted RBP7.46□□□□□ -1.22
ATXN3-245ENST00000556958 GPR37L1O60883 481 aa7.46□□□□□ -1.22
ATXN3-245ENST00000556958 COL6A1P12109 1028 aa7.46□□□□□ -1.22
ATXN3-245ENST00000556958 KCNJ4P48050 445 aa7.46□□□□□ -1.22
ATXN3-245ENST00000556958 PDE3AQ14432 1141 aa7.46□□□□□ -1.22
ATXN3-245ENST00000556958 GRIN2CQ14957 1233 aa7.46□□□□□ -1.22
ATXN3-245ENST00000556958 LRRC26Q2I0M4 334 aa7.46□□□□□ -1.22
ATXN3-245ENST00000556958 AAK1Q2M2I8 961 aa7.46□□□□□ -1.22
ATXN3-245ENST00000556958 DCAF15Q66K64 600 aa7.46□□□□□ -1.22
ATXN3-245ENST00000556958 FASTKD5Q7L8L6 764 aaKnown RBP7.46□□□□□ -1.22
ATXN3-245ENST00000556958 TXNRD3Q86VQ6 643 aa7.46□□□□□ -1.22
ATXN3-245ENST00000556958 ZKSCAN4Q969J2 545 aaPredicted RBP7.46□□□□□ -1.22
ATXN3-245ENST00000556958 TMEM39BQ9GZU3 492 aa7.46□□□□□ -1.22
ATXN3-245ENST00000556958 TDRD3Q9H7E2 651 aaKnown RBP7.46□□□□□ -1.22
ATXN3-245ENST00000556958 TSPYL4Q9UJ04 414 aa7.46□□□□□ -1.22
ATXN3-245ENST00000556958 PCDHAC2Q9Y5I4 1007 aa7.46□□□□□ -1.22
ATXN3-245ENST00000556958 COL2A1P02458 1487 aaPredicted RBP7.46□□□□□ -1.22
ATXN3-245ENST00000556958 PFASO15067 1338 aa7.46□□□□□ -1.22
ATXN3-245ENST00000556958 BDP1A6H8Y1 2624 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms