RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 GSTT1P30711 240 aa8.7□□□□□ -1.02
HIF1A-209ENST00000556827 ATP2B2Q01814 1243 aa8.7□□□□□ -1.02
HIF1A-209ENST00000556827 KIF4BQ2VIQ3 1234 aa8.7□□□□□ -1.02
HIF1A-209ENST00000556827 RNF19AQ9NV58 838 aa8.7□□□□□ -1.02
HIF1A-209ENST00000556827 CADPSQ9ULU8 1353 aa8.7□□□□□ -1.02
HIF1A-209ENST00000556827 PDZD3Q86UT5 571 aa8.69□□□□□ -1.02
HIF1A-209ENST00000556827 ACSBG1Q96GR2 724 aa8.69□□□□□ -1.02
HIF1A-209ENST00000556827 FANCD2OSQ96PS1 177 aa8.69□□□□□ -1.02
HIF1A-209ENST00000556827 CBX8Q9HC52 389 aa8.69□□□□□ -1.02
HIF1A-209ENST00000556827 MROH2BQ7Z745 1585 aa8.69□□□□□ -1.02
HIF1A-209ENST00000556827 RNGTTO60942 597 aaKnown RBP8.68□□□□□ -1.02
HIF1A-209ENST00000556827 LDHBP07195 334 aaKnown RBP8.68□□□□□ -1.02
HIF1A-209ENST00000556827 NME2P22392 152 aa8.68□□□□□ -1.02
HIF1A-209ENST00000556827 ARNTP27540 789 aa8.68□□□□□ -1.02
HIF1A-209ENST00000556827 EAPPQ56P03 285 aaPredicted RBP8.68□□□□□ -1.02
HIF1A-209ENST00000556827 MAP1SQ66K74 1059 aaPredicted RBP8.68□□□□□ -1.02
HIF1A-209ENST00000556827 ALG1LQ6GMV1 187 aa8.68□□□□□ -1.02
HIF1A-209ENST00000556827 TPTE2Q6XPS3 522 aa8.68□□□□□ -1.02
HIF1A-209ENST00000556827 VSIG10LQ86VR7 867 aa8.68□□□□□ -1.02
HIF1A-209ENST00000556827 C3orf58Q8NDZ4 430 aa8.68□□□□□ -1.02
HIF1A-209ENST00000556827 STK35Q8TDR2 534 aa8.68□□□□□ -1.02
HIF1A-209ENST00000556827 EMILIN2Q9BXX0 1053 aa8.68□□□□□ -1.02
HIF1A-209ENST00000556827 SRCIN1Q9C0H9 1055 aa8.68□□□□□ -1.02
HIF1A-209ENST00000556827 C1GALT1Q9NS00 363 aa8.68□□□□□ -1.02
HIF1A-209ENST00000556827 SEZ6L2Q6UXD5 910 aa8.67□□□□□ -1.02
HIF1A-209ENST00000556827 SMYD4Q8IYR2 804 aaPredicted RBP8.67□□□□□ -1.02
HIF1A-209ENST00000556827 DISC1Q9NRI5 854 aa8.67□□□□□ -1.02
HIF1A-209ENST00000556827 BSDC1Q9NW68 430 aaPredicted RBP8.67□□□□□ -1.02
HIF1A-209ENST00000556827 CCDC39Q9UFE4 941 aa8.67□□□□□ -1.02
HIF1A-209ENST00000556827 COL17A1Q9UMD9 1497 aaPredicted RBP8.67□□□□□ -1.02
HIF1A-209ENST00000556827 FBXO24O75426 580 aa8.66□□□□□ -1.02
HIF1A-209ENST00000556827 HCLS1P14317 486 aaPredicted RBP8.66□□□□□ -1.02
HIF1A-209ENST00000556827 CDK5R2Q13319 367 aa8.66□□□□□ -1.02
HIF1A-209ENST00000556827 TTLL4Q14679 1199 aa8.66□□□□□ -1.02
HIF1A-209ENST00000556827 FBXO33Q7Z6M2 555 aa8.66□□□□□ -1.02
HIF1A-209ENST00000556827 CEP44Q9C0F1 390 aa8.66□□□□□ -1.02
HIF1A-209ENST00000556827 SPG7Q9UQ90 795 aa8.66□□□□□ -1.02
HIF1A-209ENST00000556827 SAMM50Q9Y512 469 aa8.66□□□□□ -1.02
HIF1A-209ENST00000556827 PCDHGC5Q9Y5F6 944 aa8.66□□□□□ -1.02
HIF1A-209ENST00000556827 PRNPP04156 253 aa8.65□□□□□ -1.02
HIF1A-209ENST00000556827 CYP27C1Q4G0S4 372 aa8.65□□□□□ -1.02
HIF1A-209ENST00000556827 OGFOD3Q6PK18 319 aa8.65□□□□□ -1.02
HIF1A-209ENST00000556827 NECAB3Q96P71 396 aaPredicted RBP8.65□□□□□ -1.02
HIF1A-209ENST00000556827 SSU72Q9NP77 194 aaKnown RBP8.65□□□□□ -1.02
HIF1A-209ENST00000556827 PPM1HQ9ULR3 514 aa8.65□□□□□ -1.02
HIF1A-209ENST00000556827 THOC2Q8NI27 1593 aaKnown RBP8.65□□□□□ -1.03
HIF1A-209ENST00000556827 GIPC1O14908 333 aa8.64□□□□□ -1.03
HIF1A-209ENST00000556827 PAX4O43316 350 aa8.64□□□□□ -1.03
HIF1A-209ENST00000556827 FAM87AP0C7U9 286 aa8.64□□□□□ -1.03
HIF1A-209ENST00000556827 ERCC3P19447 782 aa8.64□□□□□ -1.03
HIF1A-209ENST00000556827 COL19A1Q14993 1142 aa8.64□□□□□ -1.03
HIF1A-209ENST00000556827 TP53INP2Q8IXH6 220 aa8.64□□□□□ -1.03
HIF1A-209ENST00000556827 ABI1Q8IZP0 508 aa8.64□□□□□ -1.03
HIF1A-209ENST00000556827 FLCNQ8NFG4 579 aa8.64□□□□□ -1.03
HIF1A-209ENST00000556827 GPBAR1Q8TDU6 330 aa8.64□□□□□ -1.03
HIF1A-209ENST00000556827 FBXL18Q96ME1 805 aa8.64□□□□□ -1.03
HIF1A-209ENST00000556827 OSBPL7Q9BZF2 842 aa8.64□□□□□ -1.03
HIF1A-209ENST00000556827 ZC3H7BQ9UGR2 993 aaKnown RBP8.64□□□□□ -1.03
HIF1A-209ENST00000556827 CCDC9Q9Y3X0 531 aaKnown RBP8.64□□□□□ -1.03
HIF1A-209ENST00000556827 MRC2Q9UBG0 1479 aa8.64□□□□□ -1.03
HIF1A-209ENST00000556827 TAL1P17542 331 aaPredicted RBP8.63□□□□□ -1.03
HIF1A-209ENST00000556827 RGS22Q8NE09 1264 aa8.63□□□□□ -1.03
HIF1A-209ENST00000556827 DUSP9Q99956 384 aaKnown RBP8.63□□□□□ -1.03
HIF1A-209ENST00000556827 BCL2L13Q9BXK5 485 aa8.63□□□□□ -1.03
HIF1A-209ENST00000556827 PICK1Q9NRD5 415 aa8.63□□□□□ -1.03
HIF1A-209ENST00000556827 ENC1O14682 589 aa8.62□□□□□ -1.03
HIF1A-209ENST00000556827 ZNF252P-AS1Q0IIN9 211 aa8.62□□□□□ -1.03
HIF1A-209ENST00000556827 GIPC2Q8TF65 315 aa8.62□□□□□ -1.03
HIF1A-209ENST00000556827 PCOLCE2Q9UKZ9 415 aa8.62□□□□□ -1.03
HIF1A-209ENST00000556827 PRPF40AO75400 957 aaKnown RBP8.61□□□□□ -1.03
HIF1A-209ENST00000556827 PAGE1O75459 146 aa8.61□□□□□ -1.03
HIF1A-209ENST00000556827 NEFMP07197 916 aa8.61□□□□□ -1.03
HIF1A-209ENST00000556827 ERVK-24P63145 666 aa8.61□□□□□ -1.03
HIF1A-209ENST00000556827 ZC3H12AQ5D1E8 599 aaKnown RBP8.61□□□□□ -1.03
HIF1A-209ENST00000556827 LLGL2Q6P1M3 1020 aa8.61□□□□□ -1.03
HIF1A-209ENST00000556827 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.61□□□□□ -1.03
HIF1A-209ENST00000556827 ISL2Q96A47 359 aa8.61□□□□□ -1.03
HIF1A-209ENST00000556827 FAM161BQ96MY7 647 aa8.61□□□□□ -1.03
HIF1A-209ENST00000556827 C12orf49Q9H741 205 aa8.61□□□□□ -1.03
HIF1A-209ENST00000556827 FAM8A1Q9UBU6 413 aa8.61□□□□□ -1.03
HIF1A-209ENST00000556827 CEP164Q9UPV0 1460 aa8.6□□□□□ -1.03
HIF1A-209ENST00000556827 USP17L7P0C7H9 530 aa8.6□□□□□ -1.03
HIF1A-209ENST00000556827 RNF214Q8ND24 703 aa8.6□□□□□ -1.03
HIF1A-209ENST00000556827 GRIN3AQ8TCU5 1115 aa8.6□□□□□ -1.03
HIF1A-209ENST00000556827 KRTAP9-2Q9BYQ4 174 aa8.6□□□□□ -1.03
HIF1A-209ENST00000556827 PARP2Q9UGN5 583 aa8.6□□□□□ -1.03
HIF1A-209ENST00000556827 ADGRE2Q9UHX3 823 aa8.6□□□□□ -1.03
HIF1A-209ENST00000556827 LRRC14Q15048 493 aa8.59□□□□□ -1.03
HIF1A-209ENST00000556827 MPRIPQ6WCQ1 1025 aa8.59□□□□□ -1.03
HIF1A-209ENST00000556827 ARHGAP27Q6ZUM4 889 aa8.59□□□□□ -1.03
HIF1A-209ENST00000556827 FAM181AQ8N9Y4 354 aa8.59□□□□□ -1.03
HIF1A-209ENST00000556827 CSADQ9Y600 493 aa8.59□□□□□ -1.03
HIF1A-209ENST00000556827 KIF21AQ7Z4S6 1674 aa8.59□□□□□ -1.03
HIF1A-209ENST00000556827 TRIM37O94972 964 aa8.58□□□□□ -1.04
HIF1A-209ENST00000556827 CELA3AP09093 270 aa8.58□□□□□ -1.04
HIF1A-209ENST00000556827 BMP6P22004 513 aa8.58□□□□□ -1.04
HIF1A-209ENST00000556827 NFXL1Q6ZNB6 911 aa8.58□□□□□ -1.04
HIF1A-209ENST00000556827 AGBL5Q8NDL9 886 aa8.58□□□□□ -1.04
HIF1A-209ENST00000556827 TTF2Q9UNY4 1162 aaKnown RBP8.58□□□□□ -1.04
HIF1A-209ENST00000556827 SLC5A6Q9Y289 635 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms