RNA–Protein interactions for RNA: ENST00000556507.1

TGFB3-205, Transcript of transforming growth factor beta 3, humanhuman

TSL 3

Gene TGFB3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-205ENST00000556507 TTC37Q6PGP7 1564 aa5.33□□□□□ -1.56
TGFB3-205ENST00000556507 PLA2R1Q13018 1463 aa5.32□□□□□ -1.56
TGFB3-205ENST00000556507 SMG6Q86US8 1419 aaKnown RBP5.32□□□□□ -1.56
TGFB3-205ENST00000556507 SPAG9O60271 1321 aaKnown RBP5.32□□□□□ -1.56
TGFB3-205ENST00000556507 A0A096LPE4 126 aa5.32□□□□□ -1.56
TGFB3-205ENST00000556507 A0A1W2PP55 124 aa5.32□□□□□ -1.56
TGFB3-205ENST00000556507 A0A1W2PPZ6 126 aa5.32□□□□□ -1.56
TGFB3-205ENST00000556507 CPNE3O75131 537 aaKnown RBP5.32□□□□□ -1.56
TGFB3-205ENST00000556507 ESRRAP11474 423 aaPredicted RBP5.32□□□□□ -1.56
TGFB3-205ENST00000556507 TMF1P82094 1093 aa5.32□□□□□ -1.56
TGFB3-205ENST00000556507 ORC1Q13415 861 aa5.32□□□□□ -1.56
TGFB3-205ENST00000556507 ARTNQ5T4W7 220 aa5.32□□□□□ -1.56
TGFB3-205ENST00000556507 ANKRD34AQ69YU3 496 aa5.32□□□□□ -1.56
TGFB3-205ENST00000556507 FDX2Q6P4F2 183 aa5.32□□□□□ -1.56
TGFB3-205ENST00000556507 CCNJLQ8IV13 435 aa5.32□□□□□ -1.56
TGFB3-205ENST00000556507 USP26Q9BXU7 913 aa5.32□□□□□ -1.56
TGFB3-205ENST00000556507 SOX17Q9H6I2 414 aaPredicted RBP5.32□□□□□ -1.56
TGFB3-205ENST00000556507 ZCCHC11Q5TAX3 1644 aaKnown RBP5.32□□□□□ -1.56
TGFB3-205ENST00000556507 ERCC6L2Q5T890 1561 aa5.32□□□□□ -1.56
TGFB3-205ENST00000556507 MAGI2Q86UL8 1455 aa5.32□□□□□ -1.56
TGFB3-205ENST00000556507 LAMC1P11047 1609 aa5.31□□□□□ -1.56
TGFB3-205ENST00000556507 MEGF11A6BM72 1044 aa5.31□□□□□ -1.56
TGFB3-205ENST00000556507 SOWAHDA6NJG2 315 aa5.31□□□□□ -1.56
TGFB3-205ENST00000556507 EIF4EBP3O60516 100 aaPredicted RBP5.31□□□□□ -1.56
TGFB3-205ENST00000556507 BRD1O95696 1058 aa5.31□□□□□ -1.56
TGFB3-205ENST00000556507 GRIA4P48058 902 aa5.31□□□□□ -1.56
TGFB3-205ENST00000556507 GSTM4Q03013 218 aa5.31□□□□□ -1.56
TGFB3-205ENST00000556507 KIAA0319Q5VV43 1072 aa5.31□□□□□ -1.56
TGFB3-205ENST00000556507 NUTM2GQ5VZR2 741 aa5.31□□□□□ -1.56
TGFB3-205ENST00000556507 MYRFLQ96LU7 910 aa5.31□□□□□ -1.56
TGFB3-205ENST00000556507 TCF12Q99081 682 aa5.31□□□□□ -1.56
TGFB3-205ENST00000556507 NIF3L1Q9GZT8 377 aa5.31□□□□□ -1.56
TGFB3-205ENST00000556507 EHD4Q9H223 541 aa5.31□□□□□ -1.56
TGFB3-205ENST00000556507 CLEC4MQ9H2X3 399 aaPredicted RBP5.31□□□□□ -1.56
TGFB3-205ENST00000556507 BIN2Q9UBW5 565 aaPredicted RBP5.31□□□□□ -1.56
TGFB3-205ENST00000556507 RNF112Q9ULX5 631 aa5.31□□□□□ -1.56
TGFB3-205ENST00000556507 NUDCQ9Y266 331 aa5.31□□□□□ -1.56
TGFB3-205ENST00000556507 TRAPPC8Q9Y2L5 1435 aa5.31□□□□□ -1.56
TGFB3-205ENST00000556507 INSRP06213 1382 aa5.3□□□□□ -1.56
TGFB3-205ENST00000556507 LRPPRCP42704 1394 aaKnown RBP5.3□□□□□ -1.56
TGFB3-205ENST00000556507 KANK1Q14678 1352 aa5.3□□□□□ -1.56
TGFB3-205ENST00000556507 TRPM1Q7Z4N2 1603 aa5.3□□□□□ -1.56
TGFB3-205ENST00000556507 EIF2AK4Q9P2K8 1649 aaKnown RBP5.3□□□□□ -1.56
TGFB3-205ENST00000556507 RNF123Q5XPI4 1314 aa5.3□□□□□ -1.56
TGFB3-205ENST00000556507 ABCC1P33527 1531 aa5.3□□□□□ -1.56
TGFB3-205ENST00000556507 EIF1AYO14602 144 aaKnown RBP5.3□□□□□ -1.56
TGFB3-205ENST00000556507 GPR182O15218 404 aa5.3□□□□□ -1.56
TGFB3-205ENST00000556507 GSC2O15499 205 aa5.3□□□□□ -1.56
TGFB3-205ENST00000556507 IGLV1-40P01703 118 aa5.3□□□□□ -1.56
TGFB3-205ENST00000556507 PREPP48147 710 aa5.3□□□□□ -1.56
TGFB3-205ENST00000556507 PCDH1Q08174 1060 aa5.3□□□□□ -1.56
TGFB3-205ENST00000556507 LRP8Q14114 963 aa5.3□□□□□ -1.56
TGFB3-205ENST00000556507 SPRED3Q2MJR0 410 aa5.3□□□□□ -1.56
TGFB3-205ENST00000556507 AFAP1Q8N556 730 aa5.3□□□□□ -1.56
TGFB3-205ENST00000556507 C12orf50Q8NA57 414 aaPredicted RBP5.3□□□□□ -1.56
TGFB3-205ENST00000556507 DMRTB1Q96MA1 342 aa5.3□□□□□ -1.56
TGFB3-205ENST00000556507 TESK2Q96S53 571 aa5.3□□□□□ -1.56
TGFB3-205ENST00000556507 DNAJC25Q9H1X3 360 aa5.3□□□□□ -1.56
TGFB3-205ENST00000556507 KCNF1Q9H3M0 494 aa5.3□□□□□ -1.56
TGFB3-205ENST00000556507 NPHS2Q9NP85 383 aa5.3□□□□□ -1.56
TGFB3-205ENST00000556507 A2MP01023 1474 aa5.3□□□□□ -1.56
TGFB3-205ENST00000556507 PTPRTO14522 1441 aa5.3□□□□□ -1.56
TGFB3-205ENST00000556507 PRDM15P57071 1507 aaPredicted RBP5.29□□□□□ -1.56
TGFB3-205ENST00000556507 WDR7Q9Y4E6 1490 aa5.29□□□□□ -1.56
TGFB3-205ENST00000556507 LOC100289279A0A1B0GTE1 492 aa5.29□□□□□ -1.56
TGFB3-205ENST00000556507 HMX2A2RU54 273 aa5.29□□□□□ -1.56
TGFB3-205ENST00000556507 HYAL3O43820 417 aaPredicted RBP5.29□□□□□ -1.56
TGFB3-205ENST00000556507 GAS2O43903 313 aaKnown RBP5.29□□□□□ -1.56
TGFB3-205ENST00000556507 BMP3P12645 472 aa5.29□□□□□ -1.56
TGFB3-205ENST00000556507 IRX6P78412 446 aaPredicted RBP5.29□□□□□ -1.56
TGFB3-205ENST00000556507 ZNF423Q2M1K9 1284 aa5.29□□□□□ -1.56
TGFB3-205ENST00000556507 EXOSC6Q5RKV6 272 aaKnown RBP5.29□□□□□ -1.56
TGFB3-205ENST00000556507 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.29□□□□□ -1.56
TGFB3-205ENST00000556507 NBPF11Q86T75 865 aa5.29□□□□□ -1.56
TGFB3-205ENST00000556507 CLEC10AQ8IUN9 316 aa5.29□□□□□ -1.56
TGFB3-205ENST00000556507 TRIM42Q8IWZ5 723 aa5.29□□□□□ -1.56
TGFB3-205ENST00000556507 FAM20CQ8IXL6 584 aa5.29□□□□□ -1.56
TGFB3-205ENST00000556507 CCDC74AQ96AQ1 378 aa5.29□□□□□ -1.56
TGFB3-205ENST00000556507 TMPRSS13Q9BYE2 586 aa5.29□□□□□ -1.56
TGFB3-205ENST00000556507 RBCK1Q9BYM8 510 aa5.29□□□□□ -1.56
TGFB3-205ENST00000556507 C7orf69Q9H7B7 122 aa5.29□□□□□ -1.56
TGFB3-205ENST00000556507 CYP4F12Q9HCS2 524 aa5.29□□□□□ -1.56
TGFB3-205ENST00000556507 GNEQ9Y223 722 aaKnown RBP5.29□□□□□ -1.56
TGFB3-205ENST00000556507 PARD3Q8TEW0 1356 aa5.29□□□□□ -1.56
TGFB3-205ENST00000556507 EIF5BO60841 1220 aaKnown RBP5.28□□□□□ -1.56
TGFB3-205ENST00000556507 GADD45BO75293 160 aaPredicted RBP5.28□□□□□ -1.56
TGFB3-205ENST00000556507 IGHA2P01877 340 aa5.28□□□□□ -1.56
TGFB3-205ENST00000556507 NFIAQ12857 509 aa5.28□□□□□ -1.56
TGFB3-205ENST00000556507 RNF43Q68DV7 783 aa5.28□□□□□ -1.56
TGFB3-205ENST00000556507 BEND4Q6ZU67 534 aa5.28□□□□□ -1.56
TGFB3-205ENST00000556507 SMG8Q8ND04 991 aaKnown RBP5.28□□□□□ -1.56
TGFB3-205ENST00000556507 DDX54Q8TDD1 881 aaKnown RBP5.28□□□□□ -1.56
TGFB3-205ENST00000556507 CSRNP1Q96S65 589 aa5.28□□□□□ -1.56
TGFB3-205ENST00000556507 FAM83CQ9BQN1 747 aa5.28□□□□□ -1.56
TGFB3-205ENST00000556507 PANK3Q9H999 370 aa5.28□□□□□ -1.56
TGFB3-205ENST00000556507 HIF3AQ9Y2N7 669 aa5.28□□□□□ -1.56
TGFB3-205ENST00000556507 SCAPERQ9BY12 1400 aa5.28□□□□□ -1.56
TGFB3-205ENST00000556507 E9PCH4 1651 aa5.28□□□□□ -1.56
TGFB3-205ENST00000556507 FANCIQ9NVI1 1328 aa5.27□□□□□ -1.57
TGFB3-205ENST00000556507 COL17A1Q9UMD9 1497 aaPredicted RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms