RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 LRRC69Q6ZNQ3 347 aa7.2□□□□□ -1.26
TDP1-215ENST00000556498 SDCCAG8Q86SQ7 713 aaPredicted RBP7.2□□□□□ -1.26
TDP1-215ENST00000556498 TREML1Q86YW5 311 aa7.2□□□□□ -1.26
TDP1-215ENST00000556498 CCDC146Q8IYE0 955 aa7.2□□□□□ -1.26
TDP1-215ENST00000556498 TXLNBQ8N3L3 684 aa7.2□□□□□ -1.26
TDP1-215ENST00000556498 FAM76AQ8TAV0 307 aa7.2□□□□□ -1.26
TDP1-215ENST00000556498 GIMAP1Q8WWP7 306 aa7.2□□□□□ -1.26
TDP1-215ENST00000556498 TCP11Q8WWU5 503 aa7.2□□□□□ -1.26
TDP1-215ENST00000556498 DNAAF4Q8WXU2 420 aa7.2□□□□□ -1.26
TDP1-215ENST00000556498 RSRC1Q96IZ7 334 aaKnown RBP7.2□□□□□ -1.26
TDP1-215ENST00000556498 HSH2DQ96JZ2 352 aa7.2□□□□□ -1.26
TDP1-215ENST00000556498 TSPY26PQ9H489 355 aa7.2□□□□□ -1.26
TDP1-215ENST00000556498 RUBCNLQ9H714 662 aa7.2□□□□□ -1.26
TDP1-215ENST00000556498 INCENPQ9NQS7 918 aa7.2□□□□□ -1.26
TDP1-215ENST00000556498 BARX2Q9UMQ3 279 aaPredicted RBP7.2□□□□□ -1.26
TDP1-215ENST00000556498 TMEM110-MUSTN1A8MSY1 372 aa7.19□□□□□ -1.26
TDP1-215ENST00000556498 PPFIA3O75145 1194 aa7.19□□□□□ -1.26
TDP1-215ENST00000556498 ECEL1O95672 775 aa7.19□□□□□ -1.26
TDP1-215ENST00000556498 IGHDP01880 384 aa7.19□□□□□ -1.26
TDP1-215ENST00000556498 GJA8P48165 433 aa7.19□□□□□ -1.26
TDP1-215ENST00000556498 NASPP49321 788 aaPredicted RBP7.19□□□□□ -1.26
TDP1-215ENST00000556498 RPS6KA3P51812 740 aa7.19□□□□□ -1.26
TDP1-215ENST00000556498 NOLC1Q14978 699 aaKnown RBP eCLIP7.19□□□□□ -1.26
TDP1-215ENST00000556498 EFCAB2Q5VUJ9 269 aa7.19□□□□□ -1.26
TDP1-215ENST00000556498 CC2D1AQ6P1N0 951 aaPredicted RBP7.19□□□□□ -1.26
TDP1-215ENST00000556498 SYNE3Q6ZMZ3 975 aa7.19□□□□□ -1.26
TDP1-215ENST00000556498 KRT77Q7Z794 578 aa7.19□□□□□ -1.26
TDP1-215ENST00000556498 NLRP8Q86W28 1048 aa7.19□□□□□ -1.26
TDP1-215ENST00000556498 ATCAYQ86WG3 371 aa7.19□□□□□ -1.26
TDP1-215ENST00000556498 LRRC49Q8IUZ0 686 aa7.19□□□□□ -1.26
TDP1-215ENST00000556498 PGBD3Q8N328 593 aa7.19□□□□□ -1.26
TDP1-215ENST00000556498 MICALL1Q8N3F8 863 aa7.19□□□□□ -1.26
TDP1-215ENST00000556498 CCDC155Q8N6L0 562 aa7.19□□□□□ -1.26
TDP1-215ENST00000556498 GOLGA1Q92805 767 aa7.19□□□□□ -1.26
TDP1-215ENST00000556498 QPCTLQ9NXS2 382 aa7.19□□□□□ -1.26
TDP1-215ENST00000556498 CHPF2Q9P2E5 772 aa7.19□□□□□ -1.26
TDP1-215ENST00000556498 CLIP2Q9UDT6 1046 aa7.19□□□□□ -1.26
TDP1-215ENST00000556498 DCTN4Q9UJW0 460 aa7.19□□□□□ -1.26
TDP1-215ENST00000556498 MROH2BQ7Z745 1585 aa7.19□□□□□ -1.26
TDP1-215ENST00000556498 OPLAHO14841 1288 aa7.18□□□□□ -1.26
TDP1-215ENST00000556498 SGSM2O43147 1006 aa7.18□□□□□ -1.26
TDP1-215ENST00000556498 VAMP4O75379 141 aa7.18□□□□□ -1.26
TDP1-215ENST00000556498 MTA2O94776 668 aa7.18□□□□□ -1.26
TDP1-215ENST00000556498 KIAA0754O94854 1291 aa7.18□□□□□ -1.26
TDP1-215ENST00000556498 SMC2O95347 1197 aa7.18□□□□□ -1.26
TDP1-215ENST00000556498 YY1P25490 414 aa7.18□□□□□ -1.26
TDP1-215ENST00000556498 ZAP70P43403 619 aa7.18□□□□□ -1.26
TDP1-215ENST00000556498 INHBEP58166 350 aa7.18□□□□□ -1.26
TDP1-215ENST00000556498 LBRQ14739 615 aaKnown RBP7.18□□□□□ -1.26
TDP1-215ENST00000556498 CCDC184Q52MB2 194 aa7.18□□□□□ -1.26
TDP1-215ENST00000556498 HHATQ5VTY9 493 aa7.18□□□□□ -1.26
TDP1-215ENST00000556498 SEPT14Q6ZU15 432 aa7.18□□□□□ -1.26
TDP1-215ENST00000556498 BTLAQ7Z6A9 289 aa7.18□□□□□ -1.26
TDP1-215ENST00000556498 MYLK4Q86YV6 388 aaPredicted RBP7.18□□□□□ -1.26
TDP1-215ENST00000556498 BICD1Q96G01 975 aa7.18□□□□□ -1.26
TDP1-215ENST00000556498 PLEKHG4BQ96PX9 1271 aa7.18□□□□□ -1.26
TDP1-215ENST00000556498 BAG1Q99933 345 aaPredicted RBP7.18□□□□□ -1.26
TDP1-215ENST00000556498 CCDC87Q9NVE4 849 aa7.18□□□□□ -1.26
TDP1-215ENST00000556498 POGKQ9P215 609 aa7.18□□□□□ -1.26
TDP1-215ENST00000556498 ITGB1BP2Q9UKP3 347 aa7.18□□□□□ -1.26
TDP1-215ENST00000556498 TMA7Q9Y2S6 64 aaKnown RBP7.18□□□□□ -1.26
TDP1-215ENST00000556498 ATP6V0A2Q9Y487 856 aa7.18□□□□□ -1.26
TDP1-215ENST00000556498 BAZ1BQ9UIG0 1483 aaKnown RBP7.17□□□□□ -1.26
TDP1-215ENST00000556498 FAM25EA8MYX2 175 aa7.17□□□□□ -1.26
TDP1-215ENST00000556498 POTECB2RU33 542 aa7.17□□□□□ -1.26
TDP1-215ENST00000556498 GOLGA6L19H0YKK7 550 aa7.17□□□□□ -1.26
TDP1-215ENST00000556498 HIP1RO75146 1068 aa7.17□□□□□ -1.26
TDP1-215ENST00000556498 SASH1O94885 1247 aa7.17□□□□□ -1.26
TDP1-215ENST00000556498 NAT2P11245 290 aa7.17□□□□□ -1.26
TDP1-215ENST00000556498 CD53P19397 219 aa7.17□□□□□ -1.26
TDP1-215ENST00000556498 IBSPP21815 317 aaPredicted RBP7.17□□□□□ -1.26
TDP1-215ENST00000556498 HOXD10P28358 340 aa7.17□□□□□ -1.26
TDP1-215ENST00000556498 INPP5BP32019 993 aa7.17□□□□□ -1.26
TDP1-215ENST00000556498 CLK1P49759 484 aaKnown RBP7.17□□□□□ -1.26
TDP1-215ENST00000556498 CDR1P51861 262 aa7.17□□□□□ -1.26
TDP1-215ENST00000556498 WASHC5Q12768 1159 aa7.17□□□□□ -1.26
TDP1-215ENST00000556498 POSTNQ15063 836 aa7.17□□□□□ -1.26
TDP1-215ENST00000556498 EFHC2Q5JST6 749 aa7.17□□□□□ -1.26
TDP1-215ENST00000556498 TTC19Q6DKK2 380 aaPredicted RBP7.17□□□□□ -1.26
TDP1-215ENST00000556498 RIPOR1Q6ZS17 1223 aa7.17□□□□□ -1.26
TDP1-215ENST00000556498 TRIM42Q8IWZ5 723 aa7.17□□□□□ -1.26
TDP1-215ENST00000556498 CCDC65Q8IXS2 484 aa7.17□□□□□ -1.26
TDP1-215ENST00000556498 NDUFAF2Q8N183 169 aa7.17□□□□□ -1.26
TDP1-215ENST00000556498 KRT222Q8N1A0 295 aa7.17□□□□□ -1.26
TDP1-215ENST00000556498 CHCHD4Q8N4Q1 142 aa7.17□□□□□ -1.26
TDP1-215ENST00000556498 PPM1EQ8WY54 764 aa7.17□□□□□ -1.26
TDP1-215ENST00000556498 MRRFQ96E11 262 aaKnown RBP7.17□□□□□ -1.26
TDP1-215ENST00000556498 CITED4Q96RK1 184 aa7.17□□□□□ -1.26
TDP1-215ENST00000556498 RBSNQ9H1K0 784 aa7.17□□□□□ -1.26
TDP1-215ENST00000556498 A1CFQ9NQ94 594 aaKnown RBP7.17□□□□□ -1.26
TDP1-215ENST00000556498 DIAPH3Q9NSV4 1193 aa7.17□□□□□ -1.26
TDP1-215ENST00000556498 COMMD8Q9NX08 183 aa7.17□□□□□ -1.26
TDP1-215ENST00000556498 TMEM63CQ9P1W3 806 aa7.17□□□□□ -1.26
TDP1-215ENST00000556498 GABBR1Q9UBS5 961 aa7.17□□□□□ -1.26
TDP1-215ENST00000556498 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.17□□□□□ -1.26
TDP1-215ENST00000556498 TMCC3Q9ULS5 477 aa7.17□□□□□ -1.26
TDP1-215ENST00000556498 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.17□□□□□ -1.26
TDP1-215ENST00000556498 ITM2BQ9Y287 266 aa7.17□□□□□ -1.26
TDP1-215ENST00000556498 GJA3Q9Y6H8 435 aa7.17□□□□□ -1.26
TDP1-215ENST00000556498 KDRP35968 1356 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms