RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 KIRREL3Q8IZU9 778 aa9.79□□□□□ -0.84
MARK3-210ENST00000556463 GOLGA5Q8TBA6 731 aa9.79□□□□□ -0.84
MARK3-210ENST00000556463 MFRPQ9BY79 579 aa9.79□□□□□ -0.84
MARK3-210ENST00000556463 DDX21Q9NR30 783 aaKnown RBP eCLIP9.79□□□□□ -0.84
MARK3-210ENST00000556463 DONSONQ9NYP3 566 aa9.79□□□□□ -0.84
MARK3-210ENST00000556463 SCN11AQ9UI33 1791 aa9.79□□□□□ -0.84
MARK3-210ENST00000556463 MROH7-TTC4A0A0A0MT08 1334 aa9.79□□□□□ -0.84
MARK3-210ENST00000556463 NEURL1BA8MQ27 555 aa9.79□□□□□ -0.84
MARK3-210ENST00000556463 RNMTO43148 476 aaKnown RBP9.79□□□□□ -0.84
MARK3-210ENST00000556463 SSBP05455 408 aaKnown RBP eCLIP9.79□□□□□ -0.84
MARK3-210ENST00000556463 ARMC3Q5W041 872 aa9.79□□□□□ -0.84
MARK3-210ENST00000556463 KBTBD3Q8NAB2 608 aa9.79□□□□□ -0.84
MARK3-210ENST00000556463 WDR24Q96S15 920 aa9.79□□□□□ -0.84
MARK3-210ENST00000556463 BIN2Q9UBW5 565 aaPredicted RBP9.79□□□□□ -0.84
MARK3-210ENST00000556463 PPP2R2CQ9Y2T4 447 aa9.79□□□□□ -0.84
MARK3-210ENST00000556463 AFDNP55196 1824 aaKnown RBP9.79□□□□□ -0.84
MARK3-210ENST00000556463 NLRP6P59044 892 aa9.79□□□□□ -0.84
MARK3-210ENST00000556463 BRAPQ7Z569 592 aa9.79□□□□□ -0.84
MARK3-210ENST00000556463 PARD6BQ9BYG5 372 aa9.79□□□□□ -0.84
MARK3-210ENST00000556463 HPS5Q9UPZ3 1129 aa9.79□□□□□ -0.84
MARK3-210ENST00000556463 CCDC151A5D8V7 595 aa9.78□□□□□ -0.84
MARK3-210ENST00000556463 E7EWF7 191 aa9.78□□□□□ -0.84
MARK3-210ENST00000556463 H3BQF6 201 aa9.78□□□□□ -0.84
MARK3-210ENST00000556463 SLC3A2P08195 630 aaKnown RBP9.78□□□□□ -0.84
MARK3-210ENST00000556463 PYGBP11216 843 aa9.78□□□□□ -0.84
MARK3-210ENST00000556463 NF2P35240 595 aa9.78□□□□□ -0.84
MARK3-210ENST00000556463 GCKRQ14397 625 aa9.78□□□□□ -0.84
MARK3-210ENST00000556463 ZMYM1Q5SVZ6 1142 aa9.78□□□□□ -0.84
MARK3-210ENST00000556463 MYSM1Q5VVJ2 828 aa9.78□□□□□ -0.84
MARK3-210ENST00000556463 LRRC2Q9BYS8 371 aa9.78□□□□□ -0.84
MARK3-210ENST00000556463 ADAM21Q9UKJ8 722 aa9.78□□□□□ -0.84
MARK3-210ENST00000556463 PLEKHG2Q9H7P9 1386 aa9.78□□□□□ -0.84
MARK3-210ENST00000556463 PARP4Q9UKK3 1724 aaKnown RBP9.78□□□□□ -0.84
MARK3-210ENST00000556463 GOLGA6L9A6NEM1 432 aa9.78□□□□□ -0.84
MARK3-210ENST00000556463 SPTLC2O15270 562 aa9.78□□□□□ -0.84
MARK3-210ENST00000556463 FOXP2O15409 715 aa9.78□□□□□ -0.84
MARK3-210ENST00000556463 WDHD1O75717 1129 aaPredicted RBP9.78□□□□□ -0.84
MARK3-210ENST00000556463 ZNF18P17022 549 aa9.78□□□□□ -0.84
MARK3-210ENST00000556463 MAGEA9P43362 315 aa9.78□□□□□ -0.84
MARK3-210ENST00000556463 CASP7P55210 303 aa9.78□□□□□ -0.84
MARK3-210ENST00000556463 MDM2Q00987 491 aaPredicted RBP9.78□□□□□ -0.84
MARK3-210ENST00000556463 ARFGAP3Q9NP61 516 aa9.78□□□□□ -0.84
MARK3-210ENST00000556463 TBX22Q9Y458 520 aa9.78□□□□□ -0.84
MARK3-210ENST00000556463 ZSCAN12O43309 604 aa9.78□□□□□ -0.84
MARK3-210ENST00000556463 STX10O60499 249 aa9.78□□□□□ -0.84
MARK3-210ENST00000556463 IVLP07476 585 aa9.78□□□□□ -0.84
MARK3-210ENST00000556463 PFKFB1P16118 471 aa9.78□□□□□ -0.84
MARK3-210ENST00000556463 NAA25Q14CX7 972 aa9.78□□□□□ -0.84
MARK3-210ENST00000556463 PTPAQ15257 358 aa9.78□□□□□ -0.84
MARK3-210ENST00000556463 JAKMIP3Q5VZ66 844 aa9.78□□□□□ -0.84
MARK3-210ENST00000556463 MSANTD4Q8NCY6 345 aa9.78□□□□□ -0.84
MARK3-210ENST00000556463 KLHDC4Q8TBB5 520 aa9.78□□□□□ -0.84
MARK3-210ENST00000556463 SDF4Q9BRK5 362 aa9.78□□□□□ -0.84
MARK3-210ENST00000556463 PRAMEF22A3QJZ6 481 aa9.77□□□□□ -0.85
MARK3-210ENST00000556463 CBFA2T2O43439 604 aa9.77□□□□□ -0.85
MARK3-210ENST00000556463 TXLNAP40222 546 aa9.77□□□□□ -0.85
MARK3-210ENST00000556463 SLC39A14Q15043 492 aa9.77□□□□□ -0.85
MARK3-210ENST00000556463 BRD3Q15059 726 aa9.77□□□□□ -0.85
MARK3-210ENST00000556463 BEND6Q5SZJ8 279 aaPredicted RBP9.77□□□□□ -0.85
MARK3-210ENST00000556463 NT5DC1Q5TFE4 455 aa9.77□□□□□ -0.85
MARK3-210ENST00000556463 PARP9Q8IXQ6 854 aa9.77□□□□□ -0.85
MARK3-210ENST00000556463 USHBP1Q8N6Y0 703 aa9.77□□□□□ -0.85
MARK3-210ENST00000556463 TC2NQ8N9U0 490 aa9.77□□□□□ -0.85
MARK3-210ENST00000556463 CCDC97Q96F63 343 aaPredicted RBP9.77□□□□□ -0.85
MARK3-210ENST00000556463 NCOA5Q9HCD5 579 aaKnown RBP9.77□□□□□ -0.85
MARK3-210ENST00000556463 TJP1Q07157 1748 aa9.77□□□□□ -0.85
MARK3-210ENST00000556463 A0A0G2JLW4 131 aa9.77□□□□□ -0.85
MARK3-210ENST00000556463 KIF28PB7ZC32 967 aa9.77□□□□□ -0.85
MARK3-210ENST00000556463 ABCB7O75027 752 aa9.77□□□□□ -0.85
MARK3-210ENST00000556463 PPP6R2O75170 966 aa9.77□□□□□ -0.85
MARK3-210ENST00000556463 BMP6P22004 513 aa9.77□□□□□ -0.85
MARK3-210ENST00000556463 ACTN2P35609 894 aa9.77□□□□□ -0.85
MARK3-210ENST00000556463 USP8P40818 1118 aa9.77□□□□□ -0.85
MARK3-210ENST00000556463 FBXW10Q5XX13 1052 aa9.77□□□□□ -0.85
MARK3-210ENST00000556463 FOXP4Q8IVH2 680 aaPredicted RBP9.77□□□□□ -0.85
MARK3-210ENST00000556463 UTP14AQ9BVJ6 771 aaKnown RBP9.77□□□□□ -0.85
MARK3-210ENST00000556463 WDR19Q8NEZ3 1342 aa9.77□□□□□ -0.85
MARK3-210ENST00000556463 UNCXA6NJT0 531 aa9.76□□□□□ -0.85
MARK3-210ENST00000556463 ERLIN2O94905 339 aa9.76□□□□□ -0.85
MARK3-210ENST00000556463 HSPD1P10809 573 aaKnown RBP9.76□□□□□ -0.85
MARK3-210ENST00000556463 NAP1L1P55209 391 aaKnown RBP9.76□□□□□ -0.85
MARK3-210ENST00000556463 MYL5Q02045 173 aa9.76□□□□□ -0.85
MARK3-210ENST00000556463 MAP3K14Q99558 947 aa9.76□□□□□ -0.85
MARK3-210ENST00000556463 ANKZF1Q9H8Y5 726 aa9.76□□□□□ -0.85
MARK3-210ENST00000556463 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.76□□□□□ -0.85
MARK3-210ENST00000556463 FECHP22830 423 aa9.76□□□□□ -0.85
MARK3-210ENST00000556463 UBASH3AP57075 661 aa9.76□□□□□ -0.85
MARK3-210ENST00000556463 KIF23Q02241 960 aaPredicted RBP9.76□□□□□ -0.85
MARK3-210ENST00000556463 TFCP2Q12800 502 aa9.76□□□□□ -0.85
MARK3-210ENST00000556463 GRIPAP1Q4V328 841 aa9.76□□□□□ -0.85
MARK3-210ENST00000556463 C19orf44Q9H6X5 657 aa9.76□□□□□ -0.85
MARK3-210ENST00000556463 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.76□□□□□ -0.85
MARK3-210ENST00000556463 AMOTL2Q9Y2J4 779 aa9.76□□□□□ -0.85
MARK3-210ENST00000556463 LAMB4A4D0S4 1761 aa9.76□□□□□ -0.85
MARK3-210ENST00000556463 CARNS1A5YM72 827 aa9.76□□□□□ -0.85
MARK3-210ENST00000556463 TMEM232C9JQI7 657 aa9.76□□□□□ -0.85
MARK3-210ENST00000556463 SKAP2O75563 359 aaPredicted RBP9.76□□□□□ -0.85
MARK3-210ENST00000556463 PPP2R3AQ06190 1150 aa9.76□□□□□ -0.85
MARK3-210ENST00000556463 LONRF2Q1L5Z9 754 aa9.76□□□□□ -0.85
MARK3-210ENST00000556463 AMOTQ4VCS5 1084 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms