RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 PRC1O43663 620 aa12.81□□□□□ -0.36
LINC01550-206ENST00000556462 FGRP09769 529 aa12.81□□□□□ -0.36
LINC01550-206ENST00000556462 IARSP41252 1262 aaKnown RBP12.81□□□□□ -0.36
LINC01550-206ENST00000556462 KIAA0825Q8IV33 1275 aa12.81□□□□□ -0.36
LINC01550-206ENST00000556462 CWC22Q9HCG8 908 aaKnown RBP12.81□□□□□ -0.36
LINC01550-206ENST00000556462 GPHNQ9NQX3 736 aaPredicted RBP12.81□□□□□ -0.36
LINC01550-206ENST00000556462 CHMP5Q9NZZ3 219 aa12.81□□□□□ -0.36
LINC01550-206ENST00000556462 ZSWIM5Q9P217 1185 aa12.81□□□□□ -0.36
LINC01550-206ENST00000556462 WDR19Q8NEZ3 1342 aa12.8□□□□□ -0.36
LINC01550-206ENST00000556462 USP17L8P0C7I0 530 aa12.8□□□□□ -0.36
LINC01550-206ENST00000556462 PLCG2P16885 1265 aa12.8□□□□□ -0.36
LINC01550-206ENST00000556462 USP5P45974 858 aa12.8□□□□□ -0.36
LINC01550-206ENST00000556462 APOBEC3HQ6NTF7 200 aaKnown RBP12.8□□□□□ -0.36
LINC01550-206ENST00000556462 TAOK3Q9H2K8 898 aa12.8□□□□□ -0.36
LINC01550-206ENST00000556462 CNNM2Q9H8M5 875 aa12.8□□□□□ -0.36
LINC01550-206ENST00000556462 MCM9Q9NXL9 1143 aa12.8□□□□□ -0.36
LINC01550-206ENST00000556462 ARPP21Q9UBL0 812 aaPredicted RBP12.8□□□□□ -0.36
LINC01550-206ENST00000556462 ZNF646O15015 1829 aaPredicted RBP12.8□□□□□ -0.36
LINC01550-206ENST00000556462 BAZ2AQ9UIF9 1905 aaKnown RBP12.8□□□□□ -0.36
LINC01550-206ENST00000556462 VIL1P09327 827 aaKnown RBP12.79□□□□□ -0.36
LINC01550-206ENST00000556462 CYP2D6P10635 497 aa12.79□□□□□ -0.36
LINC01550-206ENST00000556462 CRKP46108 304 aa12.79□□□□□ -0.36
LINC01550-206ENST00000556462 EVCP57679 992 aa12.79□□□□□ -0.36
LINC01550-206ENST00000556462 HDLBPQ00341 1268 aaKnown RBP12.79□□□□□ -0.36
LINC01550-206ENST00000556462 TEX11Q8IYF3 940 aa12.79□□□□□ -0.36
LINC01550-206ENST00000556462 STK11IPQ8N1F8 1099 aa12.79□□□□□ -0.36
LINC01550-206ENST00000556462 NECAB1Q8N987 351 aa12.79□□□□□ -0.36
LINC01550-206ENST00000556462 TEKT1Q969V4 418 aa12.79□□□□□ -0.36
LINC01550-206ENST00000556462 KRT23Q9C075 422 aa12.79□□□□□ -0.36
LINC01550-206ENST00000556462 RNF41Q9H4P4 317 aaPredicted RBP12.79□□□□□ -0.36
LINC01550-206ENST00000556462 CIZ1Q9ULV3 898 aaPredicted RBP12.79□□□□□ -0.36
LINC01550-206ENST00000556462 TIAM2Q8IVF5 1701 aa12.79□□□□□ -0.36
LINC01550-206ENST00000556462 KDM4AO75164 1064 aa12.79□□□□□ -0.36
LINC01550-206ENST00000556462 RAD17O75943 681 aa12.79□□□□□ -0.36
LINC01550-206ENST00000556462 FGD1P98174 961 aa12.79□□□□□ -0.36
LINC01550-206ENST00000556462 APOBRQ0VD83 1088 aa12.79□□□□□ -0.36
LINC01550-206ENST00000556462 C12orf60Q5U649 245 aa12.79□□□□□ -0.36
LINC01550-206ENST00000556462 MAPKAPK5Q8IW41 473 aa12.79□□□□□ -0.36
LINC01550-206ENST00000556462 CCDC83Q8IWF9 413 aa12.79□□□□□ -0.36
LINC01550-206ENST00000556462 ZDHHC15Q96MV8 337 aa12.79□□□□□ -0.36
LINC01550-206ENST00000556462 ZNRF3Q9ULT6 936 aa12.79□□□□□ -0.36
LINC01550-206ENST00000556462 FER1L6Q2WGJ9 1857 aa12.79□□□□□ -0.36
LINC01550-206ENST00000556462 PSMD14O00487 310 aa12.78□□□□□ -0.36
LINC01550-206ENST00000556462 RSBN1LQ6PCB5 846 aaPredicted RBP12.78□□□□□ -0.36
LINC01550-206ENST00000556462 NIM1KQ8IY84 436 aa12.78□□□□□ -0.36
LINC01550-206ENST00000556462 IGDCC4Q8TDY8 1250 aa12.78□□□□□ -0.36
LINC01550-206ENST00000556462 GMLQ99445 158 aa12.78□□□□□ -0.36
LINC01550-206ENST00000556462 PCDHAC2Q9Y5I4 1007 aa12.78□□□□□ -0.36
LINC01550-206ENST00000556462 LTBP3Q9NS15 1303 aa12.78□□□□□ -0.36
LINC01550-206ENST00000556462 WDHD1O75717 1129 aaPredicted RBP12.77□□□□□ -0.36
LINC01550-206ENST00000556462 PCP11498 1178 aaKnown RBP12.77□□□□□ -0.36
LINC01550-206ENST00000556462 CDC42EP5Q6NZY7 148 aa12.77□□□□□ -0.36
LINC01550-206ENST00000556462 FHDC1Q9C0D6 1143 aaPredicted RBP12.77□□□□□ -0.36
LINC01550-206ENST00000556462 SERPINA10Q9UK55 444 aa12.77□□□□□ -0.36
LINC01550-206ENST00000556462 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.77□□□□□ -0.36
LINC01550-206ENST00000556462 FLT1P17948 1338 aa12.77□□□□□ -0.36
LINC01550-206ENST00000556462 PDIA3P30101 505 aaKnown RBP12.77□□□□□ -0.37
LINC01550-206ENST00000556462 PLCD1P51178 756 aa12.77□□□□□ -0.37
LINC01550-206ENST00000556462 PRELPP51888 382 aa12.77□□□□□ -0.37
LINC01550-206ENST00000556462 STK3Q13188 491 aa12.77□□□□□ -0.37
LINC01550-206ENST00000556462 RRP12Q5JTH9 1297 aaKnown RBP12.77□□□□□ -0.37
LINC01550-206ENST00000556462 ZNF274Q96GC6 653 aaPredicted RBP12.77□□□□□ -0.37
LINC01550-206ENST00000556462 TMEM87BQ96K49 555 aa12.77□□□□□ -0.37
LINC01550-206ENST00000556462 TOMM22Q9NS69 142 aa12.77□□□□□ -0.37
LINC01550-206ENST00000556462 USP40Q9NVE5 1235 aa12.77□□□□□ -0.37
LINC01550-206ENST00000556462 BRPF3Q9ULD4 1205 aa12.77□□□□□ -0.37
LINC01550-206ENST00000556462 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.77□□□□□ -0.37
LINC01550-206ENST00000556462 SH2B2O14492 632 aaPredicted RBP12.76□□□□□ -0.37
LINC01550-206ENST00000556462 CXCL9Q07325 125 aa12.76□□□□□ -0.37
LINC01550-206ENST00000556462 SLC4A8Q2Y0W8 1093 aa12.76□□□□□ -0.37
LINC01550-206ENST00000556462 GTF3C6Q969F1 213 aa12.76□□□□□ -0.37
LINC01550-206ENST00000556462 DDX4Q9NQI0 724 aaKnown RBP12.76□□□□□ -0.37
LINC01550-206ENST00000556462 ANGEL1Q9UNK9 670 aaKnown RBP12.76□□□□□ -0.37
LINC01550-206ENST00000556462 MYO3BQ8WXR4 1341 aa12.76□□□□□ -0.37
LINC01550-206ENST00000556462 ORC4O43929 436 aa12.76□□□□□ -0.37
LINC01550-206ENST00000556462 PFKFB2O60825 505 aa12.76□□□□□ -0.37
LINC01550-206ENST00000556462 DTNBO60941 627 aa12.76□□□□□ -0.37
LINC01550-206ENST00000556462 PRDM1O75626 825 aa12.76□□□□□ -0.37
LINC01550-206ENST00000556462 SCRN1Q12765 414 aa12.76□□□□□ -0.37
LINC01550-206ENST00000556462 PKP1Q13835 747 aa12.76□□□□□ -0.37
LINC01550-206ENST00000556462 JDP2Q8WYK2 163 aa12.76□□□□□ -0.37
LINC01550-206ENST00000556462 ESR2Q92731 530 aa12.76□□□□□ -0.37
LINC01550-206ENST00000556462 SENP2Q9HC62 589 aa12.76□□□□□ -0.37
LINC01550-206ENST00000556462 SAP30BPQ9UHR5 308 aaKnown RBP12.76□□□□□ -0.37
LINC01550-206ENST00000556462 ZBTB12Q9Y330 459 aaPredicted RBP12.76□□□□□ -0.37
LINC01550-206ENST00000556462 ROBO3Q96MS0 1386 aa12.75□□□□□ -0.37
LINC01550-206ENST00000556462 LIFRP42702 1097 aa12.75□□□□□ -0.37
LINC01550-206ENST00000556462 RASSF7Q02833 373 aa12.75□□□□□ -0.37
LINC01550-206ENST00000556462 RAB3GAP1Q15042 981 aa12.75□□□□□ -0.37
LINC01550-206ENST00000556462 DYNLL2Q96FJ2 89 aa12.75□□□□□ -0.37
LINC01550-206ENST00000556462 MTA3Q9BTC8 594 aa12.75□□□□□ -0.37
LINC01550-206ENST00000556462 LY9Q9HBG7 655 aa12.75□□□□□ -0.37
LINC01550-206ENST00000556462 PSME4Q14997 1843 aa12.75□□□□□ -0.37
LINC01550-206ENST00000556462 IFIT3O14879 490 aaKnown RBP12.74□□□□□ -0.37
LINC01550-206ENST00000556462 POLR3DP05423 398 aaPredicted RBP12.74□□□□□ -0.37
LINC01550-206ENST00000556462 SLC3A2P08195 630 aaKnown RBP12.74□□□□□ -0.37
LINC01550-206ENST00000556462 RBM5P52756 815 aaKnown RBP eCLIP12.74□□□□□ -0.37
LINC01550-206ENST00000556462 PDE4BQ07343 736 aa12.74□□□□□ -0.37
LINC01550-206ENST00000556462 SGMS1Q86VZ5 419 aa12.74□□□□□ -0.37
LINC01550-206ENST00000556462 CDK5RAP2Q96SN8 1893 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms