RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 ATG3Q9NT62 314 aa6.73□□□□□ -1.33
ATXN3-239ENST00000556315 MKRN1Q9UHC7 482 aaKnown RBP6.73□□□□□ -1.33
ATXN3-239ENST00000556315 LY75O60449 1722 aa6.73□□□□□ -1.33
ATXN3-239ENST00000556315 INSRP06213 1382 aa6.72□□□□□ -1.33
ATXN3-239ENST00000556315 ADARB2-AS1A8MUL3 147 aa6.72□□□□□ -1.33
ATXN3-239ENST00000556315 ZBTB7BO15156 539 aaPredicted RBP6.72□□□□□ -1.33
ATXN3-239ENST00000556315 RPS6KA4O75676 772 aa6.72□□□□□ -1.33
ATXN3-239ENST00000556315 SYT9Q86SS6 491 aa6.72□□□□□ -1.33
ATXN3-239ENST00000556315 IFNL2Q8IZJ0 200 aa6.72□□□□□ -1.33
ATXN3-239ENST00000556315 PLVAPQ9BX97 442 aa6.72□□□□□ -1.33
ATXN3-239ENST00000556315 GGNBP2Q9H3C7 697 aa6.72□□□□□ -1.33
ATXN3-239ENST00000556315 KIF24Q5T7B8 1368 aa6.71□□□□□ -1.33
ATXN3-239ENST00000556315 C10orf71Q711Q0 1435 aa6.71□□□□□ -1.34
ATXN3-239ENST00000556315 GLTPD2A6NH11 291 aa6.71□□□□□ -1.34
ATXN3-239ENST00000556315 SIN3BO75182 1162 aa6.71□□□□□ -1.34
ATXN3-239ENST00000556315 LRRC69Q6ZNQ3 347 aa6.71□□□□□ -1.34
ATXN3-239ENST00000556315 CICQ96RK0 1608 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-239ENST00000556315 SERTM1A2A2V5 107 aa6.7□□□□□ -1.34
ATXN3-239ENST00000556315 FAM196BA6NMK8 535 aa6.7□□□□□ -1.34
ATXN3-239ENST00000556315 ERVV-2B6SEH9 535 aa6.7□□□□□ -1.34
ATXN3-239ENST00000556315 ATG7O95352 703 aa6.7□□□□□ -1.34
ATXN3-239ENST00000556315 SPATA31C1P0DKV0 1188 aa6.7□□□□□ -1.34
ATXN3-239ENST00000556315 PHKG2P15735 406 aa6.7□□□□□ -1.34
ATXN3-239ENST00000556315 LMNB1P20700 586 aa6.7□□□□□ -1.34
ATXN3-239ENST00000556315 HIRAP54198 1017 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-239ENST00000556315 TBCELQ5QJ74 424 aa6.7□□□□□ -1.34
ATXN3-239ENST00000556315 SH3PXD2AQ5TCZ1 1133 aa6.7□□□□□ -1.34
ATXN3-239ENST00000556315 HOMEZQ8IX15 550 aa6.7□□□□□ -1.34
ATXN3-239ENST00000556315 TNFRSF25Q93038 417 aa6.7□□□□□ -1.34
ATXN3-239ENST00000556315 TESK2Q96S53 571 aa6.7□□□□□ -1.34
ATXN3-239ENST00000556315 KIAA1024Q9UPX6 916 aa6.7□□□□□ -1.34
ATXN3-239ENST00000556315 FLT4P35916 1363 aa6.69□□□□□ -1.34
ATXN3-239ENST00000556315 ST20-MTHFSA0A0A6YYL1 179 aa6.69□□□□□ -1.34
ATXN3-239ENST00000556315 M0R2N6 131 aa6.69□□□□□ -1.34
ATXN3-239ENST00000556315 HSP90AB1P08238 724 aaKnown RBP6.69□□□□□ -1.34
ATXN3-239ENST00000556315 RASA1P20936 1047 aa6.69□□□□□ -1.34
ATXN3-239ENST00000556315 ALAS2P22557 587 aa6.69□□□□□ -1.34
ATXN3-239ENST00000556315 ITGB7P26010 798 aa6.69□□□□□ -1.34
ATXN3-239ENST00000556315 CHRNA5P30532 468 aa6.69□□□□□ -1.34
ATXN3-239ENST00000556315 PSMA6P60900 246 aaKnown RBP6.69□□□□□ -1.34
ATXN3-239ENST00000556315 CLDN10P78369 228 aa6.69□□□□□ -1.34
ATXN3-239ENST00000556315 PDE4CQ08493 712 aa6.69□□□□□ -1.34
ATXN3-239ENST00000556315 SFSWAPQ12872 951 aaKnown RBP6.69□□□□□ -1.34
ATXN3-239ENST00000556315 COL9A3Q14050 684 aaPredicted RBP6.69□□□□□ -1.34
ATXN3-239ENST00000556315 CDCA8Q53HL2 280 aa6.69□□□□□ -1.34
ATXN3-239ENST00000556315 C1orf53Q5VUE5 145 aa6.69□□□□□ -1.34
ATXN3-239ENST00000556315 CCDC102BQ68D86 513 aa6.69□□□□□ -1.34
ATXN3-239ENST00000556315 LARGE2Q8N3Y3 721 aa6.69□□□□□ -1.34
ATXN3-239ENST00000556315 OGFOD1Q8N543 542 aa6.69□□□□□ -1.34
ATXN3-239ENST00000556315 SLC30A3Q99726 388 aa6.69□□□□□ -1.34
ATXN3-239ENST00000556315 PRDM10Q9NQV6 1147 aa6.69□□□□□ -1.34
ATXN3-239ENST00000556315 PRDM6Q9NQX0 595 aa6.69□□□□□ -1.34
ATXN3-239ENST00000556315 ZNF232Q9UNY5 417 aa6.69□□□□□ -1.34
ATXN3-239ENST00000556315 RBM19Q9Y4C8 960 aaKnown RBP6.69□□□□□ -1.34
ATXN3-239ENST00000556315 KCPQ6ZWJ8 1503 aa6.69□□□□□ -1.34
ATXN3-239ENST00000556315 CNTNAP4Q9C0A0 1308 aa6.69□□□□□ -1.34
ATXN3-239ENST00000556315 TUBGCP6Q96RT7 1819 aa6.69□□□□□ -1.34
ATXN3-239ENST00000556315 TONSLQ96HA7 1378 aa6.69□□□□□ -1.34
ATXN3-239ENST00000556315 USP54Q70EL1 1684 aa6.68□□□□□ -1.34
ATXN3-239ENST00000556315 C4BP0C0L5 1744 aa6.68□□□□□ -1.34
ATXN3-239ENST00000556315 USP17L15C9J2P7 530 aa6.68□□□□□ -1.34
ATXN3-239ENST00000556315 USP17L10C9JJH3 530 aa6.68□□□□□ -1.34
ATXN3-239ENST00000556315 USP17L13C9JLJ4 530 aa6.68□□□□□ -1.34
ATXN3-239ENST00000556315 USP17L12C9JPN9 530 aa6.68□□□□□ -1.34
ATXN3-239ENST00000556315 USP17L11C9JVI0 530 aa6.68□□□□□ -1.34
ATXN3-239ENST00000556315 USP17L21D6R901 530 aa6.68□□□□□ -1.34
ATXN3-239ENST00000556315 USP17L18D6R9N7 530 aa6.68□□□□□ -1.34
ATXN3-239ENST00000556315 USP17L22D6RA61 530 aa6.68□□□□□ -1.34
ATXN3-239ENST00000556315 USP17L17D6RBQ6 530 aa6.68□□□□□ -1.34
ATXN3-239ENST00000556315 USP17L19D6RCP7 530 aa6.68□□□□□ -1.34
ATXN3-239ENST00000556315 USP17L20D6RJB6 530 aa6.68□□□□□ -1.34
ATXN3-239ENST00000556315 PPM1GO15355 546 aaPredicted RBP6.68□□□□□ -1.34
ATXN3-239ENST00000556315 TM4SF1P30408 202 aa6.68□□□□□ -1.34
ATXN3-239ENST00000556315 DDR1Q08345 913 aa6.68□□□□□ -1.34
ATXN3-239ENST00000556315 USP17L24Q0WX57 530 aa6.68□□□□□ -1.34
ATXN3-239ENST00000556315 ELOAQ14241 798 aaKnown RBP6.68□□□□□ -1.34
ATXN3-239ENST00000556315 Q8N3U1 123 aa6.68□□□□□ -1.34
ATXN3-239ENST00000556315 TPCN2Q8NHX9 752 aa6.68□□□□□ -1.34
ATXN3-239ENST00000556315 NEUROD4Q9HD90 331 aa6.68□□□□□ -1.34
ATXN3-239ENST00000556315 STARD13Q9Y3M8 1113 aa6.68□□□□□ -1.34
ATXN3-239ENST00000556315 WASHC2AQ641Q2 1341 aa6.68□□□□□ -1.34
ATXN3-239ENST00000556315 MON2Q7Z3U7 1717 aa6.67□□□□□ -1.34
ATXN3-239ENST00000556315 DOT1LQ8TEK3 1739 aa6.67□□□□□ -1.34
ATXN3-239ENST00000556315 GATA4P43694 442 aa6.67□□□□□ -1.34
ATXN3-239ENST00000556315 CTCFP49711 727 aaPredicted RBP6.67□□□□□ -1.34
ATXN3-239ENST00000556315 CABP4P57796 275 aa6.67□□□□□ -1.34
ATXN3-239ENST00000556315 TTLL6Q8N841 843 aa6.67□□□□□ -1.34
ATXN3-239ENST00000556315 RHPN1Q8TCX5 695 aa6.67□□□□□ -1.34
ATXN3-239ENST00000556315 TSPAN10Q9H1Z9 355 aaPredicted RBP6.67□□□□□ -1.34
ATXN3-239ENST00000556315 SRP68Q9UHB9 627 aaKnown RBP6.67□□□□□ -1.34
ATXN3-239ENST00000556315 FAM208AQ9UK61 1670 aaKnown RBP6.67□□□□□ -1.34
ATXN3-239ENST00000556315 LTN1O94822 1766 aa6.67□□□□□ -1.34
ATXN3-239ENST00000556315 C5P01031 1676 aa6.66□□□□□ -1.34
ATXN3-239ENST00000556315 SPDYE3A6NKU9 549 aa6.66□□□□□ -1.34
ATXN3-239ENST00000556315 POLRMTO00411 1230 aaKnown RBP6.66□□□□□ -1.34
ATXN3-239ENST00000556315 FOXN1O15353 648 aa6.66□□□□□ -1.34
ATXN3-239ENST00000556315 DKK1O94907 266 aa6.66□□□□□ -1.34
ATXN3-239ENST00000556315 CRKLP46109 303 aaKnown RBP6.66□□□□□ -1.34
ATXN3-239ENST00000556315 PTK7Q13308 1070 aa6.66□□□□□ -1.34
ATXN3-239ENST00000556315 DOC2BQ14184 412 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms