RNA–Protein interactions for RNA: ENST00000556005.1

EFCAB11-209, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-209ENST00000556005 TIAM2Q8IVF5 1701 aa11.79□□□□□ -0.52
EFCAB11-209ENST00000556005 ANP32BQ92688 251 aaKnown RBP11.79□□□□□ -0.52
EFCAB11-209ENST00000556005 C8orf76Q96K31 380 aa11.79□□□□□ -0.52
EFCAB11-209ENST00000556005 PANK2Q9BZ23 570 aa11.79□□□□□ -0.52
EFCAB11-209ENST00000556005 TACC3Q9Y6A5 838 aa11.79□□□□□ -0.52
EFCAB11-209ENST00000556005 PPFIA3O75145 1194 aa11.78□□□□□ -0.52
EFCAB11-209ENST00000556005 ADD1P35611 737 aaKnown RBP11.78□□□□□ -0.52
EFCAB11-209ENST00000556005 NASPP49321 788 aaPredicted RBP11.78□□□□□ -0.52
EFCAB11-209ENST00000556005 TPRNQ4KMQ1 711 aa11.78□□□□□ -0.52
EFCAB11-209ENST00000556005 CTR9Q6PD62 1173 aa11.78□□□□□ -0.52
EFCAB11-209ENST00000556005 MICU3Q86XE3 530 aa11.78□□□□□ -0.52
EFCAB11-209ENST00000556005 RAB11FIP4Q86YS3 637 aa11.78□□□□□ -0.52
EFCAB11-209ENST00000556005 FBXO18Q8NFZ0 1043 aa11.78□□□□□ -0.52
EFCAB11-209ENST00000556005 LEO1Q8WVC0 666 aaPredicted RBP11.78□□□□□ -0.52
EFCAB11-209ENST00000556005 ZNF396Q96N95 335 aaPredicted RBP11.78□□□□□ -0.52
EFCAB11-209ENST00000556005 UBAC1Q9BSL1 405 aa11.78□□□□□ -0.52
EFCAB11-209ENST00000556005 GOLGA8AA7E2F4 631 aa11.78□□□□□ -0.52
EFCAB11-209ENST00000556005 SLC3A2P08195 630 aaKnown RBP11.78□□□□□ -0.52
EFCAB11-209ENST00000556005 FOSBP53539 338 aa11.78□□□□□ -0.52
EFCAB11-209ENST00000556005 RCAN1P53805 252 aa11.78□□□□□ -0.52
EFCAB11-209ENST00000556005 SP8Q8IXZ3 490 aa11.78□□□□□ -0.52
EFCAB11-209ENST00000556005 STK11IPQ8N1F8 1099 aa11.78□□□□□ -0.52
EFCAB11-209ENST00000556005 SENP2Q9HC62 589 aa11.78□□□□□ -0.52
EFCAB11-209ENST00000556005 CD209Q9NNX6 404 aa11.78□□□□□ -0.52
EFCAB11-209ENST00000556005 DCP1AQ9NPI6 582 aaPredicted RBP11.78□□□□□ -0.52
EFCAB11-209ENST00000556005 JAG2Q9Y219 1238 aa11.78□□□□□ -0.52
EFCAB11-209ENST00000556005 MYH13Q9UKX3 1938 aa11.77□□□□□ -0.52
EFCAB11-209ENST00000556005 CCDC196A0A1B0GTZ2 297 aa11.77□□□□□ -0.53
EFCAB11-209ENST00000556005 USP17L12C9JPN9 530 aa11.77□□□□□ -0.53
EFCAB11-209ENST00000556005 USP17L21D6R901 530 aa11.77□□□□□ -0.53
EFCAB11-209ENST00000556005 BAG3O95817 575 aa11.77□□□□□ -0.53
EFCAB11-209ENST00000556005 LDHCP07864 332 aa11.77□□□□□ -0.53
EFCAB11-209ENST00000556005 FGRP09769 529 aa11.77□□□□□ -0.53
EFCAB11-209ENST00000556005 IL1R1P14778 569 aa11.77□□□□□ -0.53
EFCAB11-209ENST00000556005 GUCY1B3Q02153 619 aa11.77□□□□□ -0.53
EFCAB11-209ENST00000556005 NOL10Q9BSC4 688 aaKnown RBP11.77□□□□□ -0.53
EFCAB11-209ENST00000556005 ARPP21Q9UBL0 812 aaPredicted RBP11.77□□□□□ -0.53
EFCAB11-209ENST00000556005 PPEF1O14829 653 aaPredicted RBP11.76□□□□□ -0.53
EFCAB11-209ENST00000556005 RXRAP19793 462 aa11.76□□□□□ -0.53
EFCAB11-209ENST00000556005 CDC27P30260 824 aa11.76□□□□□ -0.53
EFCAB11-209ENST00000556005 ALDH1B1P30837 517 aa11.76□□□□□ -0.53
EFCAB11-209ENST00000556005 PDE6BP35913 854 aa11.76□□□□□ -0.53
EFCAB11-209ENST00000556005 IARSP41252 1262 aaKnown RBP11.76□□□□□ -0.53
EFCAB11-209ENST00000556005 PPP2R5BQ15173 497 aa11.76□□□□□ -0.53
EFCAB11-209ENST00000556005 SBK1Q52WX2 424 aa11.76□□□□□ -0.53
EFCAB11-209ENST00000556005 IQCA1Q86XH1 822 aa11.76□□□□□ -0.53
EFCAB11-209ENST00000556005 CERS3Q8IU89 383 aa11.76□□□□□ -0.53
EFCAB11-209ENST00000556005 TBC1D16Q8TBP0 767 aa11.76□□□□□ -0.53
EFCAB11-209ENST00000556005 ZKSCAN3Q9BRR0 538 aa11.76□□□□□ -0.53
EFCAB11-209ENST00000556005 RBSNQ9H1K0 784 aa11.76□□□□□ -0.53
EFCAB11-209ENST00000556005 TSPY26PQ9H489 355 aa11.76□□□□□ -0.53
EFCAB11-209ENST00000556005 PARP3Q9Y6F1 533 aa11.76□□□□□ -0.53
EFCAB11-209ENST00000556005 CHD4Q14839 1912 aa11.76□□□□□ -0.53
EFCAB11-209ENST00000556005 C6orf229H3BNL8 230 aa11.76□□□□□ -0.53
EFCAB11-209ENST00000556005 RANBP6O60518 1105 aaKnown RBP11.76□□□□□ -0.53
EFCAB11-209ENST00000556005 NPR1P16066 1061 aa11.76□□□□□ -0.53
EFCAB11-209ENST00000556005 NTRK3Q16288 839 aa11.76□□□□□ -0.53
EFCAB11-209ENST00000556005 BRAPQ7Z569 592 aa11.76□□□□□ -0.53
EFCAB11-209ENST00000556005 SLC51AQ86UW1 340 aa11.76□□□□□ -0.53
EFCAB11-209ENST00000556005 CCDC144CPQ8IYA2 1237 aa11.76□□□□□ -0.53
EFCAB11-209ENST00000556005 WASF1Q92558 559 aa11.76□□□□□ -0.53
EFCAB11-209ENST00000556005 GPR101Q96P66 508 aaPredicted RBP11.76□□□□□ -0.53
EFCAB11-209ENST00000556005 POLLQ9UGP5 575 aa11.76□□□□□ -0.53
EFCAB11-209ENST00000556005 RCOR1Q9UKL0 485 aa11.76□□□□□ -0.53
EFCAB11-209ENST00000556005 NID2Q14112 1375 aa11.75□□□□□ -0.53
EFCAB11-209ENST00000556005 TNKSO95271 1327 aa11.75□□□□□ -0.53
EFCAB11-209ENST00000556005 SRGNP10124 158 aa11.75□□□□□ -0.53
EFCAB11-209ENST00000556005 NT5C2P49902 561 aa11.75□□□□□ -0.53
EFCAB11-209ENST00000556005 PPP4CP60510 307 aa11.75□□□□□ -0.53
EFCAB11-209ENST00000556005 PDE4BQ07343 736 aa11.75□□□□□ -0.53
EFCAB11-209ENST00000556005 SSRP1Q08945 709 aaKnown RBP11.75□□□□□ -0.53
EFCAB11-209ENST00000556005 RTN1Q16799 776 aa11.75□□□□□ -0.53
EFCAB11-209ENST00000556005 TBC1D22AQ8WUA7 517 aa11.75□□□□□ -0.53
EFCAB11-209ENST00000556005 ZSCAN10Q96SZ4 725 aaPredicted RBP11.75□□□□□ -0.53
EFCAB11-209ENST00000556005 ALG1Q9BT22 464 aa11.75□□□□□ -0.53
EFCAB11-209ENST00000556005 MYL10Q9BUA6 226 aa11.75□□□□□ -0.53
EFCAB11-209ENST00000556005 TMX4Q9H1E5 349 aaPredicted RBP11.75□□□□□ -0.53
EFCAB11-209ENST00000556005 FAM217BQ9NTX9 383 aaPredicted RBP11.75□□□□□ -0.53
EFCAB11-209ENST00000556005 ATP6V0A2Q9Y487 856 aa11.75□□□□□ -0.53
EFCAB11-209ENST00000556005 CCDC88AQ3V6T2 1871 aa11.75□□□□□ -0.53
EFCAB11-209ENST00000556005 STK36Q9NRP7 1315 aa11.75□□□□□ -0.53
EFCAB11-209ENST00000556005 CYP2D7A0A087X1C5 515 aa11.74□□□□□ -0.53
EFCAB11-209ENST00000556005 ORC4O43929 436 aa11.74□□□□□ -0.53
EFCAB11-209ENST00000556005 MMP10P09238 476 aa11.74□□□□□ -0.53
EFCAB11-209ENST00000556005 IFNAR1P17181 557 aa11.74□□□□□ -0.53
EFCAB11-209ENST00000556005 USP5P45974 858 aa11.74□□□□□ -0.53
EFCAB11-209ENST00000556005 CEBPZQ03701 1054 aaKnown RBP11.74□□□□□ -0.53
EFCAB11-209ENST00000556005 TRIM29Q14134 588 aa11.74□□□□□ -0.53
EFCAB11-209ENST00000556005 SEC23AQ15436 765 aa11.74□□□□□ -0.53
EFCAB11-209ENST00000556005 SLF2Q8IX21 1173 aa11.74□□□□□ -0.53
EFCAB11-209ENST00000556005 AMOTL1Q8IY63 956 aa11.74□□□□□ -0.53
EFCAB11-209ENST00000556005 TRIM22Q8IYM9 498 aa11.74□□□□□ -0.53
EFCAB11-209ENST00000556005 FANCBQ8NB91 859 aa11.74□□□□□ -0.53
EFCAB11-209ENST00000556005 PHKBQ93100 1093 aa11.74□□□□□ -0.53
EFCAB11-209ENST00000556005 MAST2Q6P0Q8 1798 aa11.74□□□□□ -0.53
EFCAB11-209ENST00000556005 FMNL1O95466 1100 aaPredicted RBP11.74□□□□□ -0.53
EFCAB11-209ENST00000556005 IFIT1BQ5T764 474 aaKnown RBP11.74□□□□□ -0.53
EFCAB11-209ENST00000556005 OTUD7BQ6GQQ9 843 aa11.74□□□□□ -0.53
EFCAB11-209ENST00000556005 ZNF654Q8IZM8 581 aa11.74□□□□□ -0.53
EFCAB11-209ENST00000556005 BICD2Q8TD16 824 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms