RNA–Protein interactions for RNA: ENST00000555632.5

GABRB3-209, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-209ENST00000555632 LIFRP42702 1097 aa21.56■■□□□ 1.04
GABRB3-209ENST00000555632 ILDR1Q86SU0 546 aaPredicted RBP21.56■■□□□ 1.04
GABRB3-209ENST00000555632 WDR66Q8TBY9 1149 aa21.56■■□□□ 1.04
GABRB3-209ENST00000555632 AIFM3Q96NN9 605 aa21.56■■□□□ 1.04
GABRB3-209ENST00000555632 PODXL2Q9NZ53 605 aa21.56■■□□□ 1.04
GABRB3-209ENST00000555632 TNS1Q9HBL0 1735 aaKnown RBP21.56■■□□□ 1.04
GABRB3-209ENST00000555632 UBE2Q2LH0YL09 131 aa21.55■■□□□ 1.04
GABRB3-209ENST00000555632 ZBTB43O43298 467 aa21.55■■□□□ 1.04
GABRB3-209ENST00000555632 SLC4A8Q2Y0W8 1093 aa21.55■■□□□ 1.04
GABRB3-209ENST00000555632 PHKBQ93100 1093 aa21.55■■□□□ 1.04
GABRB3-209ENST00000555632 ZSCAN16Q9H4T2 348 aaPredicted RBP21.55■■□□□ 1.04
GABRB3-209ENST00000555632 MYH2Q9UKX2 1941 aa21.55■■□□□ 1.04
GABRB3-209ENST00000555632 PPEF1O14829 653 aaPredicted RBP21.55■■□□□ 1.04
GABRB3-209ENST00000555632 ZBTB22O15209 634 aa21.55■■□□□ 1.04
GABRB3-209ENST00000555632 CYP2D6P10635 497 aa21.55■■□□□ 1.04
GABRB3-209ENST00000555632 LEO1Q8WVC0 666 aaPredicted RBP21.55■■□□□ 1.04
GABRB3-209ENST00000555632 RNF41Q9H4P4 317 aaPredicted RBP21.55■■□□□ 1.04
GABRB3-209ENST00000555632 KIF3AQ9Y496 699 aa21.55■■□□□ 1.04
GABRB3-209ENST00000555632 NRXN2Q9P2S2 1712 aa21.54■■□□□ 1.04
GABRB3-209ENST00000555632 MAST2Q6P0Q8 1798 aa21.54■■□□□ 1.04
GABRB3-209ENST00000555632 CEBPZQ03701 1054 aaKnown RBP21.54■■□□□ 1.04
GABRB3-209ENST00000555632 SPATA32Q96LK8 384 aa21.54■■□□□ 1.04
GABRB3-209ENST00000555632 ANO8Q9HCE9 1232 aaPredicted RBP21.54■■□□□ 1.04
GABRB3-209ENST00000555632 TAOK2Q9UL54 1235 aa21.54■■□□□ 1.04
GABRB3-209ENST00000555632 SLC12A7Q9Y666 1083 aa21.54■■□□□ 1.04
GABRB3-209ENST00000555632 C6orf229H3BNL8 230 aa21.53■■□□□ 1.04
GABRB3-209ENST00000555632 NTRK3Q16288 839 aa21.53■■□□□ 1.04
GABRB3-209ENST00000555632 SPTY2D1Q68D10 685 aaPredicted RBP21.53■■□□□ 1.04
GABRB3-209ENST00000555632 LRSAM1Q6UWE0 723 aa21.53■■□□□ 1.04
GABRB3-209ENST00000555632 CRNKL1Q9BZJ0 848 aaKnown RBP21.53■■□□□ 1.04
GABRB3-209ENST00000555632 RBSNQ9H1K0 784 aa21.53■■□□□ 1.04
GABRB3-209ENST00000555632 CCDC69A6NI79 296 aa21.53■■□□□ 1.04
GABRB3-209ENST00000555632 RANBP6O60518 1105 aaKnown RBP21.53■■□□□ 1.04
GABRB3-209ENST00000555632 IL1R1P14778 569 aa21.53■■□□□ 1.04
GABRB3-209ENST00000555632 CSPP1Q1MSJ5 1256 aa21.53■■□□□ 1.04
GABRB3-209ENST00000555632 CHMP4CQ96CF2 233 aa21.53■■□□□ 1.04
GABRB3-209ENST00000555632 LTBP1Q14766 1721 aa21.53■■□□□ 1.04
GABRB3-209ENST00000555632 ELP1O95163 1332 aa21.52■■□□□ 1.04
GABRB3-209ENST00000555632 GOLGA8AA7E2F4 631 aa21.52■■□□□ 1.04
GABRB3-209ENST00000555632 WTAPQ15007 396 aa21.52■■□□□ 1.04
GABRB3-209ENST00000555632 GIMAP6Q6P9H5 292 aa21.52■■□□□ 1.04
GABRB3-209ENST00000555632 C8orf76Q96K31 380 aa21.52■■□□□ 1.04
GABRB3-209ENST00000555632 DUOX1Q9NRD9 1551 aa21.52■■□□□ 1.04
GABRB3-209ENST00000555632 LRRC37AA6NMS7 1700 aa21.52■■□□□ 1.04
GABRB3-209ENST00000555632 HMGB2P26583 209 aaKnown RBP21.52■■□□□ 1.03
GABRB3-209ENST00000555632 EZH2Q15910 746 aaKnown RBP21.52■■□□□ 1.03
GABRB3-209ENST00000555632 SP8Q8IXZ3 490 aa21.52■■□□□ 1.03
GABRB3-209ENST00000555632 SH3RF3Q8TEJ3 882 aaPredicted RBP21.52■■□□□ 1.03
GABRB3-209ENST00000555632 SCAND2PQ9GZW5 306 aaPredicted RBP21.52■■□□□ 1.03
GABRB3-209ENST00000555632 ATP6V0A2Q9Y487 856 aa21.52■■□□□ 1.03
GABRB3-209ENST00000555632 RIMBP2O15034 1052 aa21.51■■□□□ 1.03
GABRB3-209ENST00000555632 EN1Q05925 392 aaPredicted RBP21.51■■□□□ 1.03
GABRB3-209ENST00000555632 FBXO18Q8NFZ0 1043 aa21.51■■□□□ 1.03
GABRB3-209ENST00000555632 ESR2Q92731 530 aa21.51■■□□□ 1.03
GABRB3-209ENST00000555632 PGBD1Q96JS3 809 aa21.51■■□□□ 1.03
GABRB3-209ENST00000555632 PARP3Q9Y6F1 533 aa21.51■■□□□ 1.03
GABRB3-209ENST00000555632 TNKSO95271 1327 aa21.51■■□□□ 1.03
GABRB3-209ENST00000555632 COL11A2P13942 1736 aaPredicted RBP21.5■■□□□ 1.03
GABRB3-209ENST00000555632 USP17L8P0C7I0 530 aa21.5■■□□□ 1.03
GABRB3-209ENST00000555632 SEC23AQ15436 765 aa21.5■■□□□ 1.03
GABRB3-209ENST00000555632 CMTR1Q8N1G2 835 aaKnown RBP21.5■■□□□ 1.03
GABRB3-209ENST00000555632 FLAD1Q8NFF5 587 aa21.5■■□□□ 1.03
GABRB3-209ENST00000555632 SYAP1Q96A49 352 aaPredicted RBP21.5■■□□□ 1.03
GABRB3-209ENST00000555632 ATP8A2Q9NTI2 1148 aa21.5■■□□□ 1.03
GABRB3-209ENST00000555632 FGRP09769 529 aa21.5■■□□□ 1.03
GABRB3-209ENST00000555632 LIG1P18858 919 aa21.5■■□□□ 1.03
GABRB3-209ENST00000555632 SART3Q15020 963 aaKnown RBP21.5■■□□□ 1.03
GABRB3-209ENST00000555632 USP28Q96RU2 1077 aa21.5■■□□□ 1.03
GABRB3-209ENST00000555632 UBAC1Q9BSL1 405 aa21.5■■□□□ 1.03
GABRB3-209ENST00000555632 MKRN1Q9UHC7 482 aaKnown RBP21.5■■□□□ 1.03
GABRB3-209ENST00000555632 MYH15Q9Y2K3 1946 aa21.5■■□□□ 1.03
GABRB3-209ENST00000555632 NPR1P16066 1061 aa21.49■■□□□ 1.03
GABRB3-209ENST00000555632 CCDC183Q5T5S1 534 aa21.49■■□□□ 1.03
GABRB3-209ENST00000555632 ENAHQ8N8S7 591 aaPredicted RBP21.49■■□□□ 1.03
GABRB3-209ENST00000555632 MCM9Q9NXL9 1143 aa21.49■■□□□ 1.03
GABRB3-209ENST00000555632 ERICH2A1L162 156 aa21.49■■□□□ 1.03
GABRB3-209ENST00000555632 KIF28PB7ZC32 967 aa21.49■■□□□ 1.03
GABRB3-209ENST00000555632 POLR3DP05423 398 aaPredicted RBP21.49■■□□□ 1.03
GABRB3-209ENST00000555632 CCDC82Q8N4S0 544 aa21.49■■□□□ 1.03
GABRB3-209ENST00000555632 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.49■■□□□ 1.03
GABRB3-209ENST00000555632 KIAA1551Q9HCM1 1747 aa21.48■■□□□ 1.03
GABRB3-209ENST00000555632 NMT2O60551 498 aa21.48■■□□□ 1.03
GABRB3-209ENST00000555632 MFSD14BQ5SR56 506 aa21.48■■□□□ 1.03
GABRB3-209ENST00000555632 ALG1Q9BT22 464 aa21.48■■□□□ 1.03
GABRB3-209ENST00000555632 RTFDC1Q9BY42 306 aaPredicted RBP21.48■■□□□ 1.03
GABRB3-209ENST00000555632 NASPP49321 788 aaPredicted RBP21.47■■□□□ 1.03
GABRB3-209ENST00000555632 FAM47AQ5JRC9 791 aa21.47■■□□□ 1.03
GABRB3-209ENST00000555632 ZNF654Q8IZM8 581 aa21.47■■□□□ 1.03
GABRB3-209ENST00000555632 NUP133Q8WUM0 1156 aa21.47■■□□□ 1.03
GABRB3-209ENST00000555632 ZSCAN10Q96SZ4 725 aaPredicted RBP21.47■■□□□ 1.03
GABRB3-209ENST00000555632 GUCY1A2P33402 732 aa21.47■■□□□ 1.03
GABRB3-209ENST00000555632 IARSP41252 1262 aaKnown RBP21.47■■□□□ 1.03
GABRB3-209ENST00000555632 CFAP45Q9UL16 551 aa21.47■■□□□ 1.03
GABRB3-209ENST00000555632 MROH7-TTC4A0A0A0MT08 1334 aa21.47■■□□□ 1.03
GABRB3-209ENST00000555632 CDKL5O76039 1030 aa21.46■■□□□ 1.03
GABRB3-209ENST00000555632 PDE6BP35913 854 aa21.46■■□□□ 1.03
GABRB3-209ENST00000555632 SYNE3Q6ZMZ3 975 aa21.46■■□□□ 1.03
GABRB3-209ENST00000555632 TGFBRAP1Q8WUH2 860 aa21.46■■□□□ 1.03
GABRB3-209ENST00000555632 CAMKK2Q96RR4 588 aa21.46■■□□□ 1.03
GABRB3-209ENST00000555632 MTA3Q9BTC8 594 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms