RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 GNRH1P01148 92 aa11.68□□□□□ -0.54
PRKCH-218ENST00000555628 GJA8P48165 433 aa11.68□□□□□ -0.54
PRKCH-218ENST00000555628 GCKRQ14397 625 aa11.68□□□□□ -0.54
PRKCH-218ENST00000555628 ARHGEF6Q15052 776 aa11.68□□□□□ -0.54
PRKCH-218ENST00000555628 C17orf99Q6UX52 265 aa11.68□□□□□ -0.54
PRKCH-218ENST00000555628 TRIM47Q96LD4 638 aa11.68□□□□□ -0.54
PRKCH-218ENST00000555628 TMEM39BQ9GZU3 492 aa11.68□□□□□ -0.54
PRKCH-218ENST00000555628 ADAMTS8Q9UP79 889 aa11.68□□□□□ -0.54
PRKCH-218ENST00000555628 MYBBP1AQ9BQG0 1328 aaKnown RBP11.67□□□□□ -0.54
PRKCH-218ENST00000555628 A0A1W2PPC1 479 aa11.67□□□□□ -0.54
PRKCH-218ENST00000555628 ZBTB7BO15156 539 aaPredicted RBP11.67□□□□□ -0.54
PRKCH-218ENST00000555628 TAF5LO75529 589 aa11.67□□□□□ -0.54
PRKCH-218ENST00000555628 PRMT2P55345 433 aa11.67□□□□□ -0.54
PRKCH-218ENST00000555628 CCDC30Q5VVM6 783 aa11.67□□□□□ -0.54
PRKCH-218ENST00000555628 G2E3Q7L622 706 aa11.67□□□□□ -0.54
PRKCH-218ENST00000555628 SLC17A8Q8NDX2 589 aa11.67□□□□□ -0.54
PRKCH-218ENST00000555628 SERPINA10Q9UK55 444 aa11.67□□□□□ -0.54
PRKCH-218ENST00000555628 JAG2Q9Y219 1238 aa11.67□□□□□ -0.54
PRKCH-218ENST00000555628 MGAMO43451 1857 aa11.67□□□□□ -0.54
PRKCH-218ENST00000555628 PRUNE2Q8WUY3 3088 aa11.66□□□□□ -0.54
PRKCH-218ENST00000555628 GJB1P08034 283 aa11.66□□□□□ -0.54
PRKCH-218ENST00000555628 GNAI1P63096 354 aa11.66□□□□□ -0.54
PRKCH-218ENST00000555628 FOXO4P98177 505 aa11.66□□□□□ -0.54
PRKCH-218ENST00000555628 MOGSQ13724 837 aa11.66□□□□□ -0.54
PRKCH-218ENST00000555628 TNFAIP1Q13829 316 aa11.66□□□□□ -0.54
PRKCH-218ENST00000555628 GRIK5Q16478 980 aa11.66□□□□□ -0.54
PRKCH-218ENST00000555628 DZIP1LQ8IYY4 767 aaKnown RBP11.66□□□□□ -0.54
PRKCH-218ENST00000555628 HELBQ8NG08 1087 aaPredicted RBP11.66□□□□□ -0.54
PRKCH-218ENST00000555628 MPHOSPH8Q99549 860 aa11.66□□□□□ -0.54
PRKCH-218ENST00000555628 TDRD3Q9H7E2 651 aaKnown RBP11.66□□□□□ -0.54
PRKCH-218ENST00000555628 KIAA1468Q9P260 1216 aa11.66□□□□□ -0.54
PRKCH-218ENST00000555628 SRRDQ9UH36 339 aa11.66□□□□□ -0.54
PRKCH-218ENST00000555628 CDH23Q9H251 3354 aa11.65□□□□□ -0.54
PRKCH-218ENST00000555628 IRF6O14896 467 aa11.65□□□□□ -0.54
PRKCH-218ENST00000555628 ZNF804AQ7Z570 1209 aa11.65□□□□□ -0.54
PRKCH-218ENST00000555628 TDRD7Q8NHU6 1098 aaKnown RBP11.65□□□□□ -0.54
PRKCH-218ENST00000555628 LRCH3Q96II8 777 aa11.65□□□□□ -0.54
PRKCH-218ENST00000555628 NPDC1Q9NQX5 325 aaPredicted RBP11.65□□□□□ -0.54
PRKCH-218ENST00000555628 RPAP1Q9BWH6 1393 aaPredicted RBP11.65□□□□□ -0.55
PRKCH-218ENST00000555628 CETPP11597 493 aa11.64□□□□□ -0.55
PRKCH-218ENST00000555628 CCL5P13501 91 aa11.64□□□□□ -0.55
PRKCH-218ENST00000555628 KCNJ4P48050 445 aa11.64□□□□□ -0.55
PRKCH-218ENST00000555628 NEXNQ0ZGT2 675 aa11.64□□□□□ -0.55
PRKCH-218ENST00000555628 PPIL2Q13356 520 aa11.64□□□□□ -0.55
PRKCH-218ENST00000555628 ERO1BQ86YB8 467 aa11.64□□□□□ -0.55
PRKCH-218ENST00000555628 FAM198AQ9UFP1 575 aa11.64□□□□□ -0.55
PRKCH-218ENST00000555628 CACNA1FO60840 1977 aa11.63□□□□□ -0.55
PRKCH-218ENST00000555628 GRK4P32298 578 aa11.63□□□□□ -0.55
PRKCH-218ENST00000555628 SNAPC2Q13487 334 aa11.63□□□□□ -0.55
PRKCH-218ENST00000555628 MFSD14BQ5SR56 506 aa11.63□□□□□ -0.55
PRKCH-218ENST00000555628 NKX2-3Q8TAU0 364 aa11.63□□□□□ -0.55
PRKCH-218ENST00000555628 DPF3Q92784 378 aa11.63□□□□□ -0.55
PRKCH-218ENST00000555628 RABGEF1Q9UJ41 708 aa11.63□□□□□ -0.55
PRKCH-218ENST00000555628 TTF2Q9UNY4 1162 aaKnown RBP11.63□□□□□ -0.55
PRKCH-218ENST00000555628 RIPOR2Q9Y4F9 1068 aa11.63□□□□□ -0.55
PRKCH-218ENST00000555628 CSADQ9Y600 493 aa11.63□□□□□ -0.55
PRKCH-218ENST00000555628 DNAH12Q6ZR08 3092 aa11.62□□□□□ -0.55
PRKCH-218ENST00000555628 ANKRD18BA2A2Z9 1011 aa11.62□□□□□ -0.55
PRKCH-218ENST00000555628 TRIM6-TRIM34B2RNG4 842 aa11.62□□□□□ -0.55
PRKCH-218ENST00000555628 TCP10L2B9ZVM9 353 aa11.62□□□□□ -0.55
PRKCH-218ENST00000555628 APAF1O14727 1248 aa11.62□□□□□ -0.55
PRKCH-218ENST00000555628 BCRP11274 1271 aa11.62□□□□□ -0.55
PRKCH-218ENST00000555628 PSMC4P43686 418 aa11.62□□□□□ -0.55
PRKCH-218ENST00000555628 CRKP46108 304 aa11.62□□□□□ -0.55
PRKCH-218ENST00000555628 EPHA10Q5JZY3 1008 aa11.62□□□□□ -0.55
PRKCH-218ENST00000555628 LINS1Q8NG48 757 aa11.62□□□□□ -0.55
PRKCH-218ENST00000555628 ZKSCAN4Q969J2 545 aaPredicted RBP11.62□□□□□ -0.55
PRKCH-218ENST00000555628 HTATIP2Q9BUP3 242 aa11.62□□□□□ -0.55
PRKCH-218ENST00000555628 KCNH4Q9UQ05 1017 aa11.62□□□□□ -0.55
PRKCH-218ENST00000555628 PTPRFP10586 1907 aa11.62□□□□□ -0.55
PRKCH-218ENST00000555628 C3orf80F5H4A9 247 aa11.61□□□□□ -0.55
PRKCH-218ENST00000555628 FARP2O94887 1054 aaPredicted RBP11.61□□□□□ -0.55
PRKCH-218ENST00000555628 RBM5P52756 815 aaKnown RBP eCLIP11.61□□□□□ -0.55
PRKCH-218ENST00000555628 HDLBPQ00341 1268 aaKnown RBP11.61□□□□□ -0.55
PRKCH-218ENST00000555628 CALD1Q05682 793 aaKnown RBP11.61□□□□□ -0.55
PRKCH-218ENST00000555628 KIF22Q14807 665 aa11.61□□□□□ -0.55
PRKCH-218ENST00000555628 FKBP1CQ5VVH2 108 aa11.61□□□□□ -0.55
PRKCH-218ENST00000555628 ANKRD23Q86SG2 305 aa11.61□□□□□ -0.55
PRKCH-218ENST00000555628 U2AF1L4Q8WU68 220 aaKnown RBP11.61□□□□□ -0.55
PRKCH-218ENST00000555628 KCTD12Q96CX2 325 aaKnown RBP11.61□□□□□ -0.55
PRKCH-218ENST00000555628 CDCA7LQ96GN5 454 aa11.61□□□□□ -0.55
PRKCH-218ENST00000555628 FAM84BQ96KN1 310 aaPredicted RBP11.61□□□□□ -0.55
PRKCH-218ENST00000555628 WRNIP1Q96S55 665 aa11.61□□□□□ -0.55
PRKCH-218ENST00000555628 CPA4Q9UI42 421 aa11.61□□□□□ -0.55
PRKCH-218ENST00000555628 MYPNQ86TC9 1320 aa11.6□□□□□ -0.55
PRKCH-218ENST00000555628 ATRNL1Q5VV63 1379 aa11.6□□□□□ -0.55
PRKCH-218ENST00000555628 CACNB3P54284 484 aa11.6□□□□□ -0.55
PRKCH-218ENST00000555628 PRKCZQ05513 592 aa11.6□□□□□ -0.55
PRKCH-218ENST00000555628 PPATQ06203 517 aa11.6□□□□□ -0.55
PRKCH-218ENST00000555628 FLIIQ13045 1269 aa11.6□□□□□ -0.55
PRKCH-218ENST00000555628 WDR43Q15061 677 aaKnown RBP eCLIP11.6□□□□□ -0.55
PRKCH-218ENST00000555628 APOBEC3HQ6NTF7 200 aaKnown RBP11.6□□□□□ -0.55
PRKCH-218ENST00000555628 FAM83AQ86UY5 434 aa11.6□□□□□ -0.55
PRKCH-218ENST00000555628 MRPL50Q8N5N7 158 aaKnown RBP11.6□□□□□ -0.55
PRKCH-218ENST00000555628 DNAAF4Q8WXU2 420 aa11.6□□□□□ -0.55
PRKCH-218ENST00000555628 TSR2Q969E8 191 aaKnown RBP11.6□□□□□ -0.55
PRKCH-218ENST00000555628 ZNF594Q96JF6 807 aaPredicted RBP11.6□□□□□ -0.55
PRKCH-218ENST00000555628 GDF15Q99988 308 aa11.6□□□□□ -0.55
PRKCH-218ENST00000555628 CHMP4AQ9BY43 222 aa11.6□□□□□ -0.55
PRKCH-218ENST00000555628 UNC93B1Q9H1C4 597 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms