RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 PAWRQ96IZ0 340 aaKnown RBP13.51□□□□□ -0.25
TDP1-212ENST00000555565 COL25A1Q9BXS0 654 aaPredicted RBP13.51□□□□□ -0.25
TDP1-212ENST00000555565 MTMR10Q9NXD2 777 aa13.51□□□□□ -0.25
TDP1-212ENST00000555565 ALPK3Q96L96 1907 aa13.51□□□□□ -0.25
TDP1-212ENST00000555565 EYA2O00167 538 aa13.5□□□□□ -0.25
TDP1-212ENST00000555565 UBTFL1P0CB47 393 aaPredicted RBP13.5□□□□□ -0.25
TDP1-212ENST00000555565 RARSP54136 660 aaKnown RBP13.5□□□□□ -0.25
TDP1-212ENST00000555565 CHAF1AQ13111 956 aaPredicted RBP13.5□□□□□ -0.25
TDP1-212ENST00000555565 IRF5Q13568 498 aa13.5□□□□□ -0.25
TDP1-212ENST00000555565 PUM3Q15397 648 aaKnown RBP13.5□□□□□ -0.25
TDP1-212ENST00000555565 LRIT3Q3SXY7 679 aa13.5□□□□□ -0.25
TDP1-212ENST00000555565 ATG9AQ7Z3C6 839 aa13.5□□□□□ -0.25
TDP1-212ENST00000555565 TBC1D22AQ8WUA7 517 aa13.5□□□□□ -0.25
TDP1-212ENST00000555565 FAM151AQ8WW52 585 aa13.5□□□□□ -0.25
TDP1-212ENST00000555565 PARK7Q99497 189 aaKnown RBP13.5□□□□□ -0.25
TDP1-212ENST00000555565 API5Q9BZZ5 524 aaKnown RBP13.5□□□□□ -0.25
TDP1-212ENST00000555565 SPTBN5Q9NRC6 3674 aaKnown RBP13.49□□□□□ -0.25
TDP1-212ENST00000555565 KIF16BQ96L93 1317 aa13.49□□□□□ -0.25
TDP1-212ENST00000555565 PHF20L1A8MW92 1017 aa13.49□□□□□ -0.25
TDP1-212ENST00000555565 CXCL11O14625 94 aa13.49□□□□□ -0.25
TDP1-212ENST00000555565 FRAT2O75474 233 aaPredicted RBP13.49□□□□□ -0.25
TDP1-212ENST00000555565 IFIT1P09914 478 aaKnown RBP13.49□□□□□ -0.25
TDP1-212ENST00000555565 MGAMO43451 1857 aa13.48□□□□□ -0.25
TDP1-212ENST00000555565 NFIAQ12857 509 aa13.48□□□□□ -0.25
TDP1-212ENST00000555565 LPIN2Q92539 896 aa13.48□□□□□ -0.25
TDP1-212ENST00000555565 TMOD2Q9NZR1 351 aa13.48□□□□□ -0.25
TDP1-212ENST00000555565 SUGT1Q9Y2Z0 365 aa13.48□□□□□ -0.25
TDP1-212ENST00000555565 LRRFIP2Q9Y608 721 aaKnown RBP13.48□□□□□ -0.25
TDP1-212ENST00000555565 ATRNL1Q5VV63 1379 aa13.47□□□□□ -0.25
TDP1-212ENST00000555565 A0A0G2JLL6 359 aaPredicted RBP13.47□□□□□ -0.25
TDP1-212ENST00000555565 CDC42EP5Q6NZY7 148 aa13.47□□□□□ -0.25
TDP1-212ENST00000555565 NECAB2Q7Z6G3 386 aa13.47□□□□□ -0.25
TDP1-212ENST00000555565 PRRT2Q7Z6L0 340 aaPredicted RBP13.47□□□□□ -0.25
TDP1-212ENST00000555565 ZFPM1Q8IX07 1006 aa13.47□□□□□ -0.25
TDP1-212ENST00000555565 MEIS3Q99687 375 aa13.47□□□□□ -0.25
TDP1-212ENST00000555565 SIL1Q9H173 461 aa13.47□□□□□ -0.25
TDP1-212ENST00000555565 FAM198AQ9UFP1 575 aa13.47□□□□□ -0.25
TDP1-212ENST00000555565 FBXO3Q9UK99 471 aa13.47□□□□□ -0.25
TDP1-212ENST00000555565 ZMYND8Q9ULU4 1186 aaPredicted RBP13.47□□□□□ -0.25
TDP1-212ENST00000555565 AFG3L2Q9Y4W6 797 aa13.47□□□□□ -0.25
TDP1-212ENST00000555565 MYH13Q9UKX3 1938 aa13.47□□□□□ -0.25
TDP1-212ENST00000555565 CIAO1O76071 339 aa13.46□□□□□ -0.25
TDP1-212ENST00000555565 SLC5A1P13866 664 aa13.46□□□□□ -0.25
TDP1-212ENST00000555565 TCP10Q12799 353 aa13.46□□□□□ -0.25
TDP1-212ENST00000555565 ARHGAP45Q92619 1136 aa13.46□□□□□ -0.25
TDP1-212ENST00000555565 PA2G4Q9UQ80 394 aaKnown RBP13.46□□□□□ -0.25
TDP1-212ENST00000555565 SLC45A1Q9Y2W3 748 aa13.46□□□□□ -0.25
TDP1-212ENST00000555565 TNPO2O14787 897 aaKnown RBP13.45□□□□□ -0.26
TDP1-212ENST00000555565 PTPRAP18433 802 aa13.45□□□□□ -0.26
TDP1-212ENST00000555565 MAGEA10P43363 369 aaPredicted RBP13.45□□□□□ -0.26
TDP1-212ENST00000555565 MAP3K10Q02779 954 aa13.45□□□□□ -0.26
TDP1-212ENST00000555565 ATP2B3Q16720 1220 aa13.45□□□□□ -0.26
TDP1-212ENST00000555565 FASTKD5Q7L8L6 764 aaKnown RBP13.45□□□□□ -0.26
TDP1-212ENST00000555565 C7orf61Q8IZ16 206 aa13.45□□□□□ -0.26
TDP1-212ENST00000555565 TDHQ8IZJ6 230 aa13.45□□□□□ -0.26
TDP1-212ENST00000555565 ANKLE1Q8NAG6 615 aa13.45□□□□□ -0.26
TDP1-212ENST00000555565 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.45□□□□□ -0.26
TDP1-212ENST00000555565 CEP126Q9P2H0 1117 aa13.45□□□□□ -0.26
TDP1-212ENST00000555565 HDAC5Q9UQL6 1122 aa13.45□□□□□ -0.26
TDP1-212ENST00000555565 DAGLAQ9Y4D2 1042 aa13.45□□□□□ -0.26
TDP1-212ENST00000555565 ZHX2Q9Y6X8 837 aa13.45□□□□□ -0.26
TDP1-212ENST00000555565 EYSQ5T1H1 3165 aa13.45□□□□□ -0.26
TDP1-212ENST00000555565 MAST3O60307 1309 aa13.44□□□□□ -0.26
TDP1-212ENST00000555565 SLURP2P0DP57 97 aa13.44□□□□□ -0.26
TDP1-212ENST00000555565 SYN1P17600 705 aa13.44□□□□□ -0.26
TDP1-212ENST00000555565 WDR66Q8TBY9 1149 aa13.44□□□□□ -0.26
TDP1-212ENST00000555565 COPRSQ9NQ92 184 aa13.44□□□□□ -0.26
TDP1-212ENST00000555565 GJD2Q9UKL4 321 aa13.44□□□□□ -0.26
TDP1-212ENST00000555565 LAMA2P24043 3122 aaKnown RBP13.43□□□□□ -0.26
TDP1-212ENST00000555565 POTEB2H3BUK9 544 aa13.43□□□□□ -0.26
TDP1-212ENST00000555565 IL15P40933 162 aaPredicted RBP13.43□□□□□ -0.26
TDP1-212ENST00000555565 TRIM32Q13049 653 aa13.43□□□□□ -0.26
TDP1-212ENST00000555565 DIXDC1Q155Q3 683 aa13.43□□□□□ -0.26
TDP1-212ENST00000555565 SH3BP5LQ7L8J4 393 aa13.43□□□□□ -0.26
TDP1-212ENST00000555565 DOCK3Q8IZD9 2030 aa13.43□□□□□ -0.26
TDP1-212ENST00000555565 SCYL3Q8IZE3 742 aa13.43□□□□□ -0.26
TDP1-212ENST00000555565 TNNQ9UQP3 1299 aa13.43□□□□□ -0.26
TDP1-212ENST00000555565 BCAR3O75815 825 aa13.42□□□□□ -0.26
TDP1-212ENST00000555565 GNAI3P08754 354 aa13.42□□□□□ -0.26
TDP1-212ENST00000555565 TRIM27P14373 513 aa13.42□□□□□ -0.26
TDP1-212ENST00000555565 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.42□□□□□ -0.26
TDP1-212ENST00000555565 GUCD1Q96NT3 240 aa13.42□□□□□ -0.26
TDP1-212ENST00000555565 NBPF3Q9H094 633 aa13.42□□□□□ -0.26
TDP1-212ENST00000555565 IPO8O15397 1037 aaKnown RBP13.41□□□□□ -0.26
TDP1-212ENST00000555565 PRDX5P30044 214 aa13.41□□□□□ -0.26
TDP1-212ENST00000555565 ADORA1P30542 326 aa13.41□□□□□ -0.26
TDP1-212ENST00000555565 PHKA1P46020 1223 aa13.41□□□□□ -0.26
TDP1-212ENST00000555565 MTX1Q13505 466 aa13.41□□□□□ -0.26
TDP1-212ENST00000555565 GADL1Q6ZQY3 521 aa13.41□□□□□ -0.26
TDP1-212ENST00000555565 MIER1Q8N108 512 aa13.41□□□□□ -0.26
TDP1-212ENST00000555565 ANKRD13CQ8N6S4 541 aa13.41□□□□□ -0.26
TDP1-212ENST00000555565 FRAT1Q92837 279 aaPredicted RBP13.41□□□□□ -0.26
TDP1-212ENST00000555565 COA7Q96BR5 231 aa13.41□□□□□ -0.26
TDP1-212ENST00000555565 USP40Q9NVE5 1235 aa13.41□□□□□ -0.26
TDP1-212ENST00000555565 GNL3LQ9NVN8 582 aaKnown RBP13.41□□□□□ -0.26
TDP1-212ENST00000555565 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.41□□□□□ -0.26
TDP1-212ENST00000555565 OGDHLQ9ULD0 1010 aa13.41□□□□□ -0.26
TDP1-212ENST00000555565 PFASO15067 1338 aa13.4□□□□□ -0.26
TDP1-212ENST00000555565 RPTORQ8N122 1335 aa13.4□□□□□ -0.26
TDP1-212ENST00000555565 SEMA3EO15041 775 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms