RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 ZMYM6O95789 1325 aa12.12□□□□□ -0.47
SRP54-208ENST00000555557 WDHD1O75717 1129 aaPredicted RBP12.11□□□□□ -0.47
SRP54-208ENST00000555557 YY1P25490 414 aa12.11□□□□□ -0.47
SRP54-208ENST00000555557 PPARAQ07869 468 aa12.11□□□□□ -0.47
SRP54-208ENST00000555557 GIMAP6Q6P9H5 292 aa12.11□□□□□ -0.47
SRP54-208ENST00000555557 BLOC1S2Q6QNY1 142 aa12.11□□□□□ -0.47
SRP54-208ENST00000555557 CHST3Q7LGC8 479 aa12.11□□□□□ -0.47
SRP54-208ENST00000555557 TDRD3Q9H7E2 651 aaKnown RBP12.11□□□□□ -0.47
SRP54-208ENST00000555557 DDX4Q9NQI0 724 aaKnown RBP12.11□□□□□ -0.47
SRP54-208ENST00000555557 RNF181Q9P0P0 153 aa12.11□□□□□ -0.47
SRP54-208ENST00000555557 CYP46A1Q9Y6A2 500 aa12.11□□□□□ -0.47
SRP54-208ENST00000555557 ADAMTSL1Q8N6G6 1762 aa12.11□□□□□ -0.47
SRP54-208ENST00000555557 FLT1P17948 1338 aa12.11□□□□□ -0.47
SRP54-208ENST00000555557 ST18O60284 1047 aa12.11□□□□□ -0.47
SRP54-208ENST00000555557 GMPSP49915 693 aaPredicted RBP12.11□□□□□ -0.47
SRP54-208ENST00000555557 NFIAQ12857 509 aa12.11□□□□□ -0.47
SRP54-208ENST00000555557 CERS3Q8IU89 383 aa12.11□□□□□ -0.47
SRP54-208ENST00000555557 SNX21Q969T3 373 aa12.11□□□□□ -0.47
SRP54-208ENST00000555557 TTC14Q96N46 770 aa12.11□□□□□ -0.47
SRP54-208ENST00000555557 LRRC2Q9BYS8 371 aa12.11□□□□□ -0.47
SRP54-208ENST00000555557 PDRG1Q9NUG6 133 aa12.11□□□□□ -0.47
SRP54-208ENST00000555557 HDAC9Q9UKV0 1011 aa12.11□□□□□ -0.47
SRP54-208ENST00000555557 DCAF8L1A6NGE4 600 aa12.1□□□□□ -0.47
SRP54-208ENST00000555557 RPS6KB1P23443 525 aa12.1□□□□□ -0.47
SRP54-208ENST00000555557 PLCD1P51178 756 aa12.1□□□□□ -0.47
SRP54-208ENST00000555557 RBM26Q5T8P6 1007 aaKnown RBP12.1□□□□□ -0.47
SRP54-208ENST00000555557 C9orf131Q5VYM1 1079 aa12.1□□□□□ -0.47
SRP54-208ENST00000555557 HSCBQ8IWL3 235 aa12.1□□□□□ -0.47
SRP54-208ENST00000555557 NEDD4P46934 1319 aa12.1□□□□□ -0.47
SRP54-208ENST00000555557 EGFRP00533 1210 aa12.09□□□□□ -0.47
SRP54-208ENST00000555557 AK2P54819 239 aa12.09□□□□□ -0.47
SRP54-208ENST00000555557 BECN1Q14457 450 aa12.09□□□□□ -0.47
SRP54-208ENST00000555557 DLGAP5Q15398 846 aa12.09□□□□□ -0.47
SRP54-208ENST00000555557 AKNAD1Q5T1N1 836 aa12.09□□□□□ -0.47
SRP54-208ENST00000555557 ZFPM1Q8IX07 1006 aa12.09□□□□□ -0.47
SRP54-208ENST00000555557 SPRYD3Q8NCJ5 442 aa12.09□□□□□ -0.47
SRP54-208ENST00000555557 TOMM22Q9NS69 142 aa12.09□□□□□ -0.47
SRP54-208ENST00000555557 ARPP21Q9UBL0 812 aaPredicted RBP12.09□□□□□ -0.47
SRP54-208ENST00000555557 CLRN2A0PK11 232 aa12.09□□□□□ -0.47
SRP54-208ENST00000555557 SPDYE2BA6NHP3 402 aa12.09□□□□□ -0.47
SRP54-208ENST00000555557 B4E1Z4 1266 aa12.09□□□□□ -0.47
SRP54-208ENST00000555557 PRDM1O75626 825 aa12.09□□□□□ -0.47
SRP54-208ENST00000555557 POLR3DP05423 398 aaPredicted RBP12.09□□□□□ -0.47
SRP54-208ENST00000555557 SPDYE6P0CI01 402 aa12.09□□□□□ -0.47
SRP54-208ENST00000555557 TCP10Q12799 353 aa12.09□□□□□ -0.47
SRP54-208ENST00000555557 SBK1Q52WX2 424 aa12.09□□□□□ -0.47
SRP54-208ENST00000555557 RRP12Q5JTH9 1297 aaKnown RBP12.09□□□□□ -0.47
SRP54-208ENST00000555557 C12orf60Q5U649 245 aa12.09□□□□□ -0.47
SRP54-208ENST00000555557 MFSD6Q6ZSS7 791 aa12.09□□□□□ -0.47
SRP54-208ENST00000555557 DHX32Q7L7V1 743 aaKnown RBP12.09□□□□□ -0.47
SRP54-208ENST00000555557 MICALL2Q8IY33 904 aa12.09□□□□□ -0.47
SRP54-208ENST00000555557 NCOA7Q8NI08 942 aa12.09□□□□□ -0.47
SRP54-208ENST00000555557 DYNLL2Q96FJ2 89 aa12.09□□□□□ -0.47
SRP54-208ENST00000555557 ANAPC4Q9UJX5 808 aa12.09□□□□□ -0.47
SRP54-208ENST00000555557 PSME4Q14997 1843 aa12.09□□□□□ -0.47
SRP54-208ENST00000555557 BAZ2AQ9UIF9 1905 aaKnown RBP12.09□□□□□ -0.47
SRP54-208ENST00000555557 DDNO94850 711 aaPredicted RBP12.08□□□□□ -0.48
SRP54-208ENST00000555557 RPS12P25398 132 aaKnown RBP12.08□□□□□ -0.48
SRP54-208ENST00000555557 TRDNQ13061 729 aa12.08□□□□□ -0.48
SRP54-208ENST00000555557 NBPF9Q3BBW0 867 aa12.08□□□□□ -0.48
SRP54-208ENST00000555557 SAMD7Q7Z3H4 446 aa12.08□□□□□ -0.48
SRP54-208ENST00000555557 RALYLQ86SE5 291 aaKnown RBP12.08□□□□□ -0.48
SRP54-208ENST00000555557 MB21D2Q8IYB1 491 aaPredicted RBP12.08□□□□□ -0.48
SRP54-208ENST00000555557 STAG1Q8WVM7 1258 aa12.08□□□□□ -0.48
SRP54-208ENST00000555557 MYOZ2Q9NPC6 264 aa12.08□□□□□ -0.48
SRP54-208ENST00000555557 CNOT7Q9UIV1 285 aaKnown RBP12.08□□□□□ -0.48
SRP54-208ENST00000555557 K7ELQ4 463 aaPredicted RBP12.07□□□□□ -0.48
SRP54-208ENST00000555557 WNT10BO00744 389 aa12.07□□□□□ -0.48
SRP54-208ENST00000555557 HMGB1P09429 215 aaKnown RBP12.07□□□□□ -0.48
SRP54-208ENST00000555557 EXOSC10Q01780 885 aaKnown RBP12.07□□□□□ -0.48
SRP54-208ENST00000555557 Q6ZUG5 572 aa12.07□□□□□ -0.48
SRP54-208ENST00000555557 CYB5R4Q7L1T6 521 aa12.07□□□□□ -0.48
SRP54-208ENST00000555557 DPF2Q92785 391 aa12.07□□□□□ -0.48
SRP54-208ENST00000555557 GPHNQ9NQX3 736 aaPredicted RBP12.07□□□□□ -0.48
SRP54-208ENST00000555557 DAXXQ9UER7 740 aaPredicted RBP12.07□□□□□ -0.48
SRP54-208ENST00000555557 FAM198AQ9UFP1 575 aa12.07□□□□□ -0.48
SRP54-208ENST00000555557 TCP10L2B9ZVM9 353 aa12.07□□□□□ -0.48
SRP54-208ENST00000555557 KDM4AO75164 1064 aa12.07□□□□□ -0.48
SRP54-208ENST00000555557 SLURP2P0DP57 97 aa12.07□□□□□ -0.48
SRP54-208ENST00000555557 ANTXR2P58335 489 aa12.07□□□□□ -0.48
SRP54-208ENST00000555557 ZNF280AP59817 542 aaPredicted RBP12.07□□□□□ -0.48
SRP54-208ENST00000555557 TOB2Q14106 344 aaPredicted RBP12.07□□□□□ -0.48
SRP54-208ENST00000555557 TBC1D10BQ4KMP7 808 aaPredicted RBP12.07□□□□□ -0.48
SRP54-208ENST00000555557 GPC2Q8N158 579 aa12.07□□□□□ -0.48
SRP54-208ENST00000555557 SLC44A5Q8NCS7 719 aa12.07□□□□□ -0.48
SRP54-208ENST00000555557 IDI2Q9BXS1 227 aa12.07□□□□□ -0.48
SRP54-208ENST00000555557 OSBPL5Q9H0X9 879 aaPredicted RBP12.07□□□□□ -0.48
SRP54-208ENST00000555557 ZSWIM5Q9P217 1185 aa12.07□□□□□ -0.48
SRP54-208ENST00000555557 ZNF70Q9UC06 446 aaPredicted RBP12.07□□□□□ -0.48
SRP54-208ENST00000555557 SCAF8Q9UPN6 1271 aaKnown RBP12.07□□□□□ -0.48
SRP54-208ENST00000555557 SBF1O95248 1867 aa12.06□□□□□ -0.48
SRP54-208ENST00000555557 PRC1O43663 620 aa12.06□□□□□ -0.48
SRP54-208ENST00000555557 GRIN3BO60391 1043 aa12.06□□□□□ -0.48
SRP54-208ENST00000555557 MCM5P33992 734 aa12.06□□□□□ -0.48
SRP54-208ENST00000555557 AMOTL1Q8IY63 956 aa12.06□□□□□ -0.48
SRP54-208ENST00000555557 RNF41Q9H4P4 317 aaPredicted RBP12.06□□□□□ -0.48
SRP54-208ENST00000555557 VEZTQ9HBM0 779 aa12.06□□□□□ -0.48
SRP54-208ENST00000555557 FOXD4L1Q9NU39 408 aa12.06□□□□□ -0.48
SRP54-208ENST00000555557 DDTLA6NHG4 134 aaPredicted RBP12.05□□□□□ -0.48
SRP54-208ENST00000555557 LARGE1O95461 756 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms