RNA–Protein interactions for RNA: ENST00000555537.1

NEK9-206, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-206ENST00000555537 ALDH1L1O75891 902 aa10.54□□□□□ -0.72
NEK9-206ENST00000555537 PTPRAP18433 802 aa10.54□□□□□ -0.72
NEK9-206ENST00000555537 BMP8BP34820 402 aa10.54□□□□□ -0.72
NEK9-206ENST00000555537 ZEB1P37275 1124 aaPredicted RBP10.54□□□□□ -0.72
NEK9-206ENST00000555537 TRIM32Q13049 653 aa10.54□□□□□ -0.72
NEK9-206ENST00000555537 IRF5Q13568 498 aa10.54□□□□□ -0.72
NEK9-206ENST00000555537 FASTKD5Q7L8L6 764 aaKnown RBP10.54□□□□□ -0.72
NEK9-206ENST00000555537 PRRT2Q7Z6L0 340 aaPredicted RBP10.54□□□□□ -0.72
NEK9-206ENST00000555537 ANKRD44Q8N8A2 993 aa10.54□□□□□ -0.72
NEK9-206ENST00000555537 COL25A1Q9BXS0 654 aaPredicted RBP10.54□□□□□ -0.72
NEK9-206ENST00000555537 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.54□□□□□ -0.72
NEK9-206ENST00000555537 SUGT1Q9Y2Z0 365 aa10.54□□□□□ -0.72
NEK9-206ENST00000555537 ALPK3Q96L96 1907 aa10.54□□□□□ -0.72
NEK9-206ENST00000555537 TRIM75PA6NK02 468 aa10.53□□□□□ -0.72
NEK9-206ENST00000555537 FGFR2P21802 821 aa10.53□□□□□ -0.72
NEK9-206ENST00000555537 PRDX5P30044 214 aa10.53□□□□□ -0.72
NEK9-206ENST00000555537 MAGEA10P43363 369 aaPredicted RBP10.53□□□□□ -0.72
NEK9-206ENST00000555537 SH3BP5LQ7L8J4 393 aa10.53□□□□□ -0.72
NEK9-206ENST00000555537 SCYL3Q8IZE3 742 aa10.53□□□□□ -0.72
NEK9-206ENST00000555537 WDR66Q8TBY9 1149 aa10.53□□□□□ -0.72
NEK9-206ENST00000555537 SMCR8Q8TEV9 937 aaPredicted RBP10.53□□□□□ -0.72
NEK9-206ENST00000555537 PICK1Q9NRD5 415 aa10.53□□□□□ -0.72
NEK9-206ENST00000555537 STXBP5LQ9Y2K9 1186 aa10.53□□□□□ -0.72
NEK9-206ENST00000555537 IFIT1P09914 478 aaKnown RBP10.52□□□□□ -0.73
NEK9-206ENST00000555537 RGS3P49796 1198 aa10.52□□□□□ -0.73
NEK9-206ENST00000555537 RABL6Q3YEC7 729 aaPredicted RBP10.52□□□□□ -0.73
NEK9-206ENST00000555537 TREML2Q5T2D2 321 aa10.52□□□□□ -0.73
NEK9-206ENST00000555537 ZSCAN29Q8IWY8 852 aaPredicted RBP10.52□□□□□ -0.73
NEK9-206ENST00000555537 COA7Q96BR5 231 aa10.52□□□□□ -0.73
NEK9-206ENST00000555537 DDTLA6NHG4 134 aaPredicted RBP10.51□□□□□ -0.73
NEK9-206ENST00000555537 PUM3Q15397 648 aaKnown RBP10.51□□□□□ -0.73
NEK9-206ENST00000555537 LRIT3Q3SXY7 679 aa10.51□□□□□ -0.73
NEK9-206ENST00000555537 GPR153Q6NV75 609 aa10.51□□□□□ -0.73
NEK9-206ENST00000555537 TDHQ8IZJ6 230 aa10.51□□□□□ -0.73
NEK9-206ENST00000555537 UBE2OQ9C0C9 1292 aaKnown RBP10.51□□□□□ -0.73
NEK9-206ENST00000555537 NBPF3Q9H094 633 aa10.51□□□□□ -0.73
NEK9-206ENST00000555537 LRRFIP2Q9Y608 721 aaKnown RBP10.51□□□□□ -0.73
NEK9-206ENST00000555537 CACNA1FO60840 1977 aa10.51□□□□□ -0.73
NEK9-206ENST00000555537 UTYO14607 1347 aa10.51□□□□□ -0.73
NEK9-206ENST00000555537 ATRNL1Q5VV63 1379 aa10.51□□□□□ -0.73
NEK9-206ENST00000555537 PEX10O60683 326 aa10.5□□□□□ -0.73
NEK9-206ENST00000555537 LDHBP07195 334 aaKnown RBP10.5□□□□□ -0.73
NEK9-206ENST00000555537 SLC5A1P13866 664 aa10.5□□□□□ -0.73
NEK9-206ENST00000555537 WDR63Q8IWG1 891 aa10.5□□□□□ -0.73
NEK9-206ENST00000555537 FAM161BQ96MY7 647 aa10.5□□□□□ -0.73
NEK9-206ENST00000555537 C11orf49Q9H6J7 331 aa10.5□□□□□ -0.73
NEK9-206ENST00000555537 HMX1Q9NP08 348 aaPredicted RBP10.5□□□□□ -0.73
NEK9-206ENST00000555537 GJD2Q9UKL4 321 aa10.5□□□□□ -0.73
NEK9-206ENST00000555537 AGTPBP1Q9UPW5 1226 aa10.5□□□□□ -0.73
NEK9-206ENST00000555537 SLC45A1Q9Y2W3 748 aa10.5□□□□□ -0.73
NEK9-206ENST00000555537 RPTORQ8N122 1335 aa10.5□□□□□ -0.73
NEK9-206ENST00000555537 DOCK3Q8IZD9 2030 aa10.5□□□□□ -0.73
NEK9-206ENST00000555537 FAM196BA6NMK8 535 aa10.49□□□□□ -0.73
NEK9-206ENST00000555537 CAPN2P17655 700 aa10.49□□□□□ -0.73
NEK9-206ENST00000555537 CYP2B6P20813 491 aa10.49□□□□□ -0.73
NEK9-206ENST00000555537 MDM2Q00987 491 aaPredicted RBP10.49□□□□□ -0.73
NEK9-206ENST00000555537 MAP3K10Q02779 954 aa10.49□□□□□ -0.73
NEK9-206ENST00000555537 PICALMQ13492 652 aa10.49□□□□□ -0.73
NEK9-206ENST00000555537 ANKLE1Q8NAG6 615 aa10.49□□□□□ -0.73
NEK9-206ENST00000555537 LPIN2Q92539 896 aa10.49□□□□□ -0.73
NEK9-206ENST00000555537 DDX4Q9NQI0 724 aaKnown RBP10.49□□□□□ -0.73
NEK9-206ENST00000555537 UNC80Q8N2C7 3258 aa10.48□□□□□ -0.73
NEK9-206ENST00000555537 EYA2O00167 538 aa10.48□□□□□ -0.73
NEK9-206ENST00000555537 CTNND1O60716 968 aaKnown RBP10.48□□□□□ -0.73
NEK9-206ENST00000555537 ENTPD3O75355 529 aa10.48□□□□□ -0.73
NEK9-206ENST00000555537 HMGCRP04035 888 aa10.48□□□□□ -0.73
NEK9-206ENST00000555537 RFX5P48382 616 aaPredicted RBP10.48□□□□□ -0.73
NEK9-206ENST00000555537 SPP2Q13103 211 aa10.48□□□□□ -0.73
NEK9-206ENST00000555537 FAM110CQ1W6H9 321 aa10.48□□□□□ -0.73
NEK9-206ENST00000555537 ATG9AQ7Z3C6 839 aa10.48□□□□□ -0.73
NEK9-206ENST00000555537 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.48□□□□□ -0.73
NEK9-206ENST00000555537 IDI2Q9BXS1 227 aa10.48□□□□□ -0.73
NEK9-206ENST00000555537 SIL1Q9H173 461 aa10.48□□□□□ -0.73
NEK9-206ENST00000555537 OGDHLQ9ULD0 1010 aa10.48□□□□□ -0.73
NEK9-206ENST00000555537 PFASO15067 1338 aa10.48□□□□□ -0.73
NEK9-206ENST00000555537 KIF16BQ96L93 1317 aa10.48□□□□□ -0.73
NEK9-206ENST00000555537 PHKA1P46020 1223 aa10.47□□□□□ -0.73
NEK9-206ENST00000555537 HMGCS2P54868 508 aa10.47□□□□□ -0.73
NEK9-206ENST00000555537 RRP1BQ14684 758 aaKnown RBP10.47□□□□□ -0.73
NEK9-206ENST00000555537 TRIB2Q92519 343 aa10.47□□□□□ -0.73
NEK9-206ENST00000555537 GUCD1Q96NT3 240 aa10.47□□□□□ -0.73
NEK9-206ENST00000555537 USP44Q9H0E7 712 aa10.47□□□□□ -0.73
NEK9-206ENST00000555537 DDX60LQ5H9U9 1706 aaKnown RBP10.47□□□□□ -0.73
NEK9-206ENST00000555537 PHIPQ8WWQ0 1821 aa10.47□□□□□ -0.73
NEK9-206ENST00000555537 ADORA1P30542 326 aa10.46□□□□□ -0.73
NEK9-206ENST00000555537 ATP2B3Q16720 1220 aa10.46□□□□□ -0.73
NEK9-206ENST00000555537 LRRC26Q2I0M4 334 aa10.46□□□□□ -0.73
NEK9-206ENST00000555537 NCBP3Q53F19 620 aaKnown RBP10.46□□□□□ -0.73
NEK9-206ENST00000555537 ASCC2Q9H1I8 757 aaPredicted RBP10.46□□□□□ -0.73
NEK9-206ENST00000555537 GNL3LQ9NVN8 582 aaKnown RBP10.46□□□□□ -0.73
NEK9-206ENST00000555537 ABCF2Q9UG63 623 aa10.46□□□□□ -0.73
NEK9-206ENST00000555537 PNMA3Q9UL41 463 aa10.46□□□□□ -0.73
NEK9-206ENST00000555537 DENND2AQ9ULE3 1009 aa10.46□□□□□ -0.73
NEK9-206ENST00000555537 PTPRFP10586 1907 aa10.45□□□□□ -0.74
NEK9-206ENST00000555537 MYH13Q9UKX3 1938 aa10.45□□□□□ -0.74
NEK9-206ENST00000555537 DOCK2Q92608 1830 aa10.45□□□□□ -0.74
NEK9-206ENST00000555537 GAKO14976 1311 aa10.45□□□□□ -0.74
NEK9-206ENST00000555537 SALL1Q9NSC2 1324 aa10.45□□□□□ -0.74
NEK9-206ENST00000555537 POTEB2H3BUK9 544 aa10.45□□□□□ -0.74
NEK9-206ENST00000555537 PRKAR2AP13861 404 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms