RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 ITIH2P19823 946 aa7.28□□□□□ -1.24
SRP54-207ENST00000555535 MPSTP25325 297 aa7.28□□□□□ -1.24
SRP54-207ENST00000555535 SPRED3Q2MJR0 410 aa7.28□□□□□ -1.24
SRP54-207ENST00000555535 CYFIP1Q7L576 1253 aa7.28□□□□□ -1.24
SRP54-207ENST00000555535 GALNT12Q8IXK2 581 aa7.28□□□□□ -1.24
SRP54-207ENST00000555535 NPIPB6E9PJ23 425 aa7.27□□□□□ -1.25
SRP54-207ENST00000555535 IGF2BP3O00425 579 aaKnown RBP eCLIP7.27□□□□□ -1.25
SRP54-207ENST00000555535 LEFTY1O75610 366 aa7.27□□□□□ -1.25
SRP54-207ENST00000555535 KRT1P04264 644 aa7.27□□□□□ -1.25
SRP54-207ENST00000555535 PTPN12Q05209 780 aaKnown RBP7.27□□□□□ -1.25
SRP54-207ENST00000555535 KRTAP5-3Q6L8H2 238 aa7.27□□□□□ -1.25
SRP54-207ENST00000555535 CCDC120Q96HB5 630 aa7.27□□□□□ -1.25
SRP54-207ENST00000555535 ZNF576Q9H609 170 aa7.27□□□□□ -1.25
SRP54-207ENST00000555535 KRT82Q9NSB4 513 aa7.27□□□□□ -1.25
SRP54-207ENST00000555535 JAG2Q9Y219 1238 aa7.27□□□□□ -1.25
SRP54-207ENST00000555535 RNGTTO60942 597 aaKnown RBP7.26□□□□□ -1.25
SRP54-207ENST00000555535 ITPKAP23677 461 aa7.26□□□□□ -1.25
SRP54-207ENST00000555535 CLCN7P51798 805 aa7.26□□□□□ -1.25
SRP54-207ENST00000555535 KCNA10Q16322 511 aa7.26□□□□□ -1.25
SRP54-207ENST00000555535 KIF4BQ2VIQ3 1234 aa7.26□□□□□ -1.25
SRP54-207ENST00000555535 FYB2Q5VWT5 728 aa7.26□□□□□ -1.25
SRP54-207ENST00000555535 DISC1Q9NRI5 854 aa7.26□□□□□ -1.25
SRP54-207ENST00000555535 ZNF777Q9ULD5 760 aaPredicted RBP7.26□□□□□ -1.25
SRP54-207ENST00000555535 TCAF2A6NFQ2 919 aa7.25□□□□□ -1.25
SRP54-207ENST00000555535 TTLL4Q14679 1199 aa7.25□□□□□ -1.25
SRP54-207ENST00000555535 RPS26P11Q5JNZ5 115 aaPredicted RBP7.25□□□□□ -1.25
SRP54-207ENST00000555535 CSRNP1Q96S65 589 aa7.25□□□□□ -1.25
SRP54-207ENST00000555535 CD320Q9NPF0 282 aa7.25□□□□□ -1.25
SRP54-207ENST00000555535 FAM13AO94988 1023 aa7.24□□□□□ -1.25
SRP54-207ENST00000555535 MED14OSP0DP75 135 aa7.24□□□□□ -1.25
SRP54-207ENST00000555535 NPR3P17342 541 aa7.24□□□□□ -1.25
SRP54-207ENST00000555535 LIG1P18858 919 aa7.24□□□□□ -1.25
SRP54-207ENST00000555535 SRPK2P78362 688 aaKnown RBP7.24□□□□□ -1.25
SRP54-207ENST00000555535 KIAA0319Q5VV43 1072 aa7.24□□□□□ -1.25
SRP54-207ENST00000555535 DBX2Q6ZNG2 339 aa7.24□□□□□ -1.25
SRP54-207ENST00000555535 TOP6BLQ8N6T0 577 aa7.24□□□□□ -1.25
SRP54-207ENST00000555535 CCDC86Q9H6F5 360 aaKnown RBP7.24□□□□□ -1.25
SRP54-207ENST00000555535 SSU72Q9NP77 194 aaKnown RBP7.24□□□□□ -1.25
SRP54-207ENST00000555535 GDNFP39905 211 aa7.23□□□□□ -1.25
SRP54-207ENST00000555535 GJD3Q8N144 294 aa7.23□□□□□ -1.25
SRP54-207ENST00000555535 RELTQ969Z4 430 aa7.23□□□□□ -1.25
SRP54-207ENST00000555535 NSUN3Q9H649 340 aaKnown RBP7.23□□□□□ -1.25
SRP54-207ENST00000555535 GNAT3A8MTJ3 354 aa7.22□□□□□ -1.25
SRP54-207ENST00000555535 POLR3DP05423 398 aaPredicted RBP7.22□□□□□ -1.25
SRP54-207ENST00000555535 NEFLP07196 543 aa7.22□□□□□ -1.25
SRP54-207ENST00000555535 HCLS1P14317 486 aaPredicted RBP7.22□□□□□ -1.25
SRP54-207ENST00000555535 GLDCP23378 1020 aa7.22□□□□□ -1.25
SRP54-207ENST00000555535 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.22□□□□□ -1.25
SRP54-207ENST00000555535 SPACA3Q8IXA5 215 aa7.22□□□□□ -1.25
SRP54-207ENST00000555535 GTF3C2Q8WUA4 911 aaPredicted RBP7.22□□□□□ -1.25
SRP54-207ENST00000555535 PCDHGC5Q9Y5F6 944 aa7.22□□□□□ -1.25
SRP54-207ENST00000555535 ATG14Q6ZNE5 492 aa7.21□□□□□ -1.26
SRP54-207ENST00000555535 WDR89Q96FK6 387 aaPredicted RBP7.21□□□□□ -1.26
SRP54-207ENST00000555535 HEXIM2Q96MH2 286 aaKnown RBP7.21□□□□□ -1.26
SRP54-207ENST00000555535 DIRC2Q96SL1 478 aa7.21□□□□□ -1.26
SRP54-207ENST00000555535 EPB41L4BQ9H329 900 aa7.21□□□□□ -1.26
SRP54-207ENST00000555535 PITPNM2Q9BZ72 1349 aa7.21□□□□□ -1.26
SRP54-207ENST00000555535 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.2□□□□□ -1.26
SRP54-207ENST00000555535 ZNF862O60290 1169 aa7.2□□□□□ -1.26
SRP54-207ENST00000555535 HOXA5P20719 270 aa7.2□□□□□ -1.26
SRP54-207ENST00000555535 EHD4Q9H223 541 aa7.2□□□□□ -1.26
SRP54-207ENST00000555535 DCP1AQ9NPI6 582 aaPredicted RBP7.2□□□□□ -1.26
SRP54-207ENST00000555535 NUAK1O60285 661 aa7.19□□□□□ -1.26
SRP54-207ENST00000555535 GSTP1P09211 210 aaKnown RBP7.19□□□□□ -1.26
SRP54-207ENST00000555535 FAM214BQ7L5A3 538 aa7.19□□□□□ -1.26
SRP54-207ENST00000555535 NPAS4Q8IUM7 802 aa7.19□□□□□ -1.26
SRP54-207ENST00000555535 RNF214Q8ND24 703 aa7.19□□□□□ -1.26
SRP54-207ENST00000555535 SLC26A8Q96RN1 970 aa7.19□□□□□ -1.26
SRP54-207ENST00000555535 SLAIN2Q9P270 581 aa7.19□□□□□ -1.26
SRP54-207ENST00000555535 ERVK-24P63145 666 aa7.18□□□□□ -1.26
SRP54-207ENST00000555535 NKPD1Q17RQ9 610 aa7.18□□□□□ -1.26
SRP54-207ENST00000555535 ISL2Q96A47 359 aa7.18□□□□□ -1.26
SRP54-207ENST00000555535 MTMR7Q9Y216 660 aa7.18□□□□□ -1.26
SRP54-207ENST00000555535 FZD6O60353 706 aa7.17□□□□□ -1.26
SRP54-207ENST00000555535 SRFP11831 508 aa7.17□□□□□ -1.26
SRP54-207ENST00000555535 RAC2P15153 192 aa7.17□□□□□ -1.26
SRP54-207ENST00000555535 SF3B2Q13435 895 aaKnown RBP7.17□□□□□ -1.26
SRP54-207ENST00000555535 CARS2Q9HA77 564 aaKnown RBP7.17□□□□□ -1.26
SRP54-207ENST00000555535 PRDM10Q9NQV6 1147 aa7.17□□□□□ -1.26
SRP54-207ENST00000555535 SMG5Q9UPR3 1016 aaKnown RBP7.17□□□□□ -1.26
SRP54-207ENST00000555535 NEFMP07197 916 aa7.16□□□□□ -1.26
SRP54-207ENST00000555535 LINC00310P59036 64 aa7.16□□□□□ -1.26
SRP54-207ENST00000555535 C20orf173Q96LM9 149 aa7.16□□□□□ -1.26
SRP54-207ENST00000555535 FOXQ1Q9C009 403 aa7.16□□□□□ -1.26
SRP54-207ENST00000555535 ZC3H12CQ9C0D7 883 aaKnown RBP7.16□□□□□ -1.26
SRP54-207ENST00000555535 PARD6AQ9NPB6 346 aa7.16□□□□□ -1.26
SRP54-207ENST00000555535 PPP2R3AQ06190 1150 aa7.15□□□□□ -1.26
SRP54-207ENST00000555535 PRPF40BQ6NWY9 871 aaKnown RBP7.15□□□□□ -1.26
SRP54-207ENST00000555535 MAPK8IP1Q9UQF2 711 aa7.15□□□□□ -1.26
SRP54-207ENST00000555535 ETV2O00321 342 aaPredicted RBP7.14□□□□□ -1.27
SRP54-207ENST00000555535 ZC3H12AQ5D1E8 599 aaKnown RBP7.14□□□□□ -1.27
SRP54-207ENST00000555535 ABHD4Q8TB40 342 aa7.14□□□□□ -1.27
SRP54-207ENST00000555535 KCNN1Q92952 543 aa7.14□□□□□ -1.27
SRP54-207ENST00000555535 PBXIP1Q96AQ6 731 aa7.14□□□□□ -1.27
SRP54-207ENST00000555535 BORCS6Q96GS4 357 aa7.14□□□□□ -1.27
SRP54-207ENST00000555535 PRDM5Q9NQX1 630 aaPredicted RBP7.14□□□□□ -1.27
SRP54-207ENST00000555535 C19orf73Q9NVV2 129 aa7.14□□□□□ -1.27
SRP54-207ENST00000555535 TRAK1Q9UPV9 953 aa7.14□□□□□ -1.27
SRP54-207ENST00000555535 ZCCHC4Q9H5U6 513 aa7.13□□□□□ -1.27
SRP54-207ENST00000555535 ABCB6Q9NP58 842 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms